RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 CPSF2Q9P2I0 782 aaKnown RBP4.69□□□□□ -1.66
SYNE2-204ENST00000358025 MYL5Q02045 173 aa4.69□□□□□ -1.66
SYNE2-204ENST00000358025 CERS3Q8IU89 383 aa4.69□□□□□ -1.66
SYNE2-204ENST00000358025 NCAPGQ9BPX3 1015 aa4.69□□□□□ -1.66
SYNE2-204ENST00000358025 HNRNPLLQ8WVV9 542 aaKnown RBP4.69□□□□□ -1.66
SYNE2-204ENST00000358025 TACC1O75410 805 aa4.69□□□□□ -1.66
SYNE2-204ENST00000358025 CHMP4BP1P59074 171 aa4.69□□□□□ -1.66
SYNE2-204ENST00000358025 HDGFL1Q5TGJ6 251 aa4.69□□□□□ -1.66
SYNE2-204ENST00000358025 RTEL1Q9NZ71 1219 aa4.69□□□□□ -1.66
SYNE2-204ENST00000358025 ARID4AP29374 1257 aaPredicted RBP4.69□□□□□ -1.66
SYNE2-204ENST00000358025 GPT2Q8TD30 523 aa4.69□□□□□ -1.66
SYNE2-204ENST00000358025 CEP126Q9P2H0 1117 aa4.69□□□□□ -1.66
SYNE2-204ENST00000358025 MAP2K2P36507 400 aa4.69□□□□□ -1.66
SYNE2-204ENST00000358025 CYP26C1Q6V0L0 522 aa4.69□□□□□ -1.66
SYNE2-204ENST00000358025 ACTN2P35609 894 aa4.69□□□□□ -1.66
SYNE2-204ENST00000358025 ZKSCAN8Q15776 578 aaPredicted RBP4.69□□□□□ -1.66
SYNE2-204ENST00000358025 TTC14Q96N46 770 aa4.69□□□□□ -1.66
SYNE2-204ENST00000358025 ARHGAP5Q13017 1502 aa4.69□□□□□ -1.66
SYNE2-204ENST00000358025 GNAT2P19087 354 aa4.69□□□□□ -1.66
SYNE2-204ENST00000358025 KIF5AQ12840 1032 aa4.69□□□□□ -1.66
SYNE2-204ENST00000358025 CABP1Q9NZU7 370 aa4.69□□□□□ -1.66
SYNE2-204ENST00000358025 ZHX1Q9UKY1 873 aaPredicted RBP4.69□□□□□ -1.66
SYNE2-204ENST00000358025 SPDYE4A6NLX3 237 aa4.69□□□□□ -1.66
SYNE2-204ENST00000358025 AACSQ86V21 672 aa4.69□□□□□ -1.66
SYNE2-204ENST00000358025 IGSF3O75054 1194 aa4.69□□□□□ -1.66
SYNE2-204ENST00000358025 TEX2Q8IWB9 1127 aa4.69□□□□□ -1.66
SYNE2-204ENST00000358025 PLXNC1O60486 1568 aa4.69□□□□□ -1.66
SYNE2-204ENST00000358025 MYL1P05976 194 aa4.69□□□□□ -1.66
SYNE2-204ENST00000358025 MBIPQ9NS73 344 aa4.69□□□□□ -1.66
SYNE2-204ENST00000358025 FYB1O15117 783 aa4.69□□□□□ -1.66
SYNE2-204ENST00000358025 PODNQ7Z5L7 613 aa4.69□□□□□ -1.66
SYNE2-204ENST00000358025 MIPOL1Q8TD10 442 aa4.69□□□□□ -1.66
SYNE2-204ENST00000358025 GLE1Q53GS7 698 aaKnown RBP4.69□□□□□ -1.66
SYNE2-204ENST00000358025 GGT6Q6P531 493 aa4.69□□□□□ -1.66
SYNE2-204ENST00000358025 KRBA2Q6ZNG9 492 aa4.69□□□□□ -1.66
SYNE2-204ENST00000358025 DSCC1Q9BVC3 393 aa4.69□□□□□ -1.66
SYNE2-204ENST00000358025 USH1CQ9Y6N9 552 aa4.69□□□□□ -1.66
SYNE2-204ENST00000358025 LEO1Q8WVC0 666 aaPredicted RBP4.69□□□□□ -1.66
SYNE2-204ENST00000358025 CBX8Q9HC52 389 aa4.69□□□□□ -1.66
SYNE2-204ENST00000358025 TRIM35Q9UPQ4 493 aa4.69□□□□□ -1.66
SYNE2-204ENST00000358025 NCOA3Q9Y6Q9 1424 aa4.69□□□□□ -1.66
SYNE2-204ENST00000358025 CETN2P41208 172 aa4.69□□□□□ -1.66
SYNE2-204ENST00000358025 TRAF1Q13077 416 aa4.69□□□□□ -1.66
SYNE2-204ENST00000358025 TAF4BQ92750 862 aa4.69□□□□□ -1.66
SYNE2-204ENST00000358025 RAB34Q9BZG1 259 aa4.69□□□□□ -1.66
SYNE2-204ENST00000358025 GRIN2AQ12879 1464 aa4.69□□□□□ -1.66
SYNE2-204ENST00000358025 CCDC69A6NI79 296 aa4.69□□□□□ -1.66
SYNE2-204ENST00000358025 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.69□□□□□ -1.66
SYNE2-204ENST00000358025 MED14O60244 1454 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 EIF1ADQ8N9N8 165 aaKnown RBP4.68□□□□□ -1.66
SYNE2-204ENST00000358025 TSR2Q969E8 191 aaKnown RBP4.68□□□□□ -1.66
SYNE2-204ENST00000358025 RUNDC3BQ96NL0 473 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 AKR1B15C9JRZ8 316 aaPredicted RBP4.68□□□□□ -1.66
SYNE2-204ENST00000358025 KIF5BP33176 963 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 MAP3K9P80192 1104 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 PAK2Q13177 524 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 MCTP2Q6DN12 878 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 RSRC1Q96IZ7 334 aaKnown RBP4.68□□□□□ -1.66
SYNE2-204ENST00000358025 FSD1Q9BTV5 496 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 JRKLQ9Y4A0 524 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 CPSF1Q10570 1443 aaKnown RBP4.68□□□□□ -1.66
SYNE2-204ENST00000358025 ATP5DP30049 168 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 GALNT17Q6IS24 598 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 VCXQ9H320 206 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 GOLGA6CA6NDK9 693 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 GOLGA6DP0CG33 693 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 TDO2P48775 406 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 NOL8Q76FK4 1167 aaKnown RBP4.68□□□□□ -1.66
SYNE2-204ENST00000358025 MAGEF1Q9HAY2 307 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 GOLGA6AQ9NYA3 693 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 PLCH2O75038 1416 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 WDR62O43379 1518 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 ODF2Q5BJF6 829 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 CARD14Q9BXL6 1004 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 STK24Q9Y6E0 443 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 GRM8O00222 908 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 CCDC121Q6ZUS5 278 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 MAATS1Q7Z4T9 603 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 CCDC170Q8IYT3 715 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 DYDC1Q8WWB3 177 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 FOXP2O15409 715 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 CUTAO60888 179 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 ITIH3Q06033 890 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 VWA3BQ502W6 1294 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 CNNM3Q8NE01 707 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 STAG1Q8WVM7 1258 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 MMS22LQ6ZRQ5 1243 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 PPP1R1BQ9UD71 204 aaPredicted RBP4.68□□□□□ -1.66
SYNE2-204ENST00000358025 CYP2C19P33261 490 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 MCMDC2Q4G0Z9 681 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 PLEKHF1Q96S99 279 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 ATP10BO94823 1461 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 MCM6Q14566 821 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 CREB3L3Q68CJ9 461 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 CACNA2D4Q7Z3S7 1137 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 PRAM1Q96QH2 718 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 FAM129AQ9BZQ8 928 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 CEP83Q9Y592 693 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 FKBP15Q5T1M5 1219 aa4.68□□□□□ -1.66
SYNE2-204ENST00000358025 ICE2Q659A1 982 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms