RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 ATP6V0A2Q9Y487 856 aa18.46■□□□□ 0.55
CCNE1-202ENST00000357943 CACNA1SQ13698 1873 aa18.46■□□□□ 0.54
CCNE1-202ENST00000357943 IGHDP01880 384 aa18.45■□□□□ 0.54
CCNE1-202ENST00000357943 HDAC1Q13547 482 aaPredicted RBP18.45■□□□□ 0.54
CCNE1-202ENST00000357943 NOP58Q9Y2X3 529 aaKnown RBP18.45■□□□□ 0.54
CCNE1-202ENST00000357943 TMC4Q7Z404 712 aa18.45■□□□□ 0.54
CCNE1-202ENST00000357943 SP8Q8IXZ3 490 aa18.45■□□□□ 0.54
CCNE1-202ENST00000357943 CIAO1O76071 339 aa18.44■□□□□ 0.54
CCNE1-202ENST00000357943 CHRNDQ07001 517 aa18.44■□□□□ 0.54
CCNE1-202ENST00000357943 G3BP1Q13283 466 aaKnown RBP eCLIP18.44■□□□□ 0.54
CCNE1-202ENST00000357943 FBXO3Q9UK99 471 aa18.44■□□□□ 0.54
CCNE1-202ENST00000357943 SPEF2Q9C093 1822 aa18.43■□□□□ 0.54
CCNE1-202ENST00000357943 ERICH6BQ5W0A0 696 aa18.43■□□□□ 0.54
CCNE1-202ENST00000357943 HELBQ8NG08 1087 aaPredicted RBP18.43■□□□□ 0.54
CCNE1-202ENST00000357943 DCTPP1Q9H773 170 aa18.43■□□□□ 0.54
CCNE1-202ENST00000357943 IL15P40933 162 aaPredicted RBP18.42■□□□□ 0.54
CCNE1-202ENST00000357943 RWDD1Q9H446 243 aaPredicted RBP18.42■□□□□ 0.54
CCNE1-202ENST00000357943 NSFL1CQ9UNZ2 370 aaKnown RBP18.42■□□□□ 0.54
CCNE1-202ENST00000357943 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.42■□□□□ 0.54
CCNE1-202ENST00000357943 TAF5LO75529 589 aa18.41■□□□□ 0.54
CCNE1-202ENST00000357943 SASH1O94885 1247 aa18.41■□□□□ 0.54
CCNE1-202ENST00000357943 YBX3P16989 372 aaKnown RBP eCLIP18.41■□□□□ 0.54
CCNE1-202ENST00000357943 GPSM2P81274 684 aa18.41■□□□□ 0.54
CCNE1-202ENST00000357943 OS9Q13438 667 aaPredicted RBP18.41■□□□□ 0.54
CCNE1-202ENST00000357943 METTL24Q5JXM2 366 aa18.41■□□□□ 0.54
CCNE1-202ENST00000357943 TMX4Q9H1E5 349 aaPredicted RBP18.41■□□□□ 0.54
CCNE1-202ENST00000357943 MROH5Q6ZUA9 1318 aa18.41■□□□□ 0.54
CCNE1-202ENST00000357943 WTIPA6NIX2 430 aaPredicted RBP18.41■□□□□ 0.54
CCNE1-202ENST00000357943 SNAP23O00161 211 aa18.41■□□□□ 0.54
CCNE1-202ENST00000357943 APBB1O00213 710 aa18.41■□□□□ 0.54
CCNE1-202ENST00000357943 VGLL2Q8N8G2 317 aa18.41■□□□□ 0.54
CCNE1-202ENST00000357943 SNED1Q8TER0 1413 aa18.41■□□□□ 0.54
CCNE1-202ENST00000357943 ANKIB1Q9P2G1 1089 aa18.41■□□□□ 0.54
CCNE1-202ENST00000357943 LRRC37AA6NMS7 1700 aa18.4■□□□□ 0.54
CCNE1-202ENST00000357943 TFCP2Q12800 502 aa18.4■□□□□ 0.54
CCNE1-202ENST00000357943 CCDC93Q567U6 631 aa18.4■□□□□ 0.54
CCNE1-202ENST00000357943 XDHP47989 1333 aa18.39■□□□□ 0.53
CCNE1-202ENST00000357943 PDE8BO95263 885 aa18.39■□□□□ 0.53
CCNE1-202ENST00000357943 HSP90AB4PQ58FF6 505 aa18.39■□□□□ 0.53
CCNE1-202ENST00000357943 CC2D2BQ6DHV5 1058 aa18.39■□□□□ 0.53
CCNE1-202ENST00000357943 MPNDQ8N594 471 aa18.39■□□□□ 0.53
CCNE1-202ENST00000357943 ANKRD2Q9GZV1 360 aa18.39■□□□□ 0.53
CCNE1-202ENST00000357943 PODXL2Q9NZ53 605 aa18.39■□□□□ 0.53
CCNE1-202ENST00000357943 CEP126Q9P2H0 1117 aa18.39■□□□□ 0.53
CCNE1-202ENST00000357943 SOGA3Q5TF21 947 aa18.38■□□□□ 0.53
CCNE1-202ENST00000357943 DPP8Q6V1X1 898 aaPredicted RBP18.38■□□□□ 0.53
CCNE1-202ENST00000357943 RAB11FIP3O75154 756 aa18.38■□□□□ 0.53
CCNE1-202ENST00000357943 B4GALNT3Q6L9W6 998 aa18.38■□□□□ 0.53
CCNE1-202ENST00000357943 RTKN2Q8IZC4 609 aa18.38■□□□□ 0.53
CCNE1-202ENST00000357943 RHPN1Q8TCX5 695 aa18.38■□□□□ 0.53
CCNE1-202ENST00000357943 GCC1Q96CN9 775 aa18.38■□□□□ 0.53
CCNE1-202ENST00000357943 CCDC136Q96JN2 1154 aa18.38■□□□□ 0.53
CCNE1-202ENST00000357943 PPP4R2Q9NY27 417 aa18.38■□□□□ 0.53
CCNE1-202ENST00000357943 POLLQ9UGP5 575 aa18.38■□□□□ 0.53
CCNE1-202ENST00000357943 GPR162Q16538 588 aa18.37■□□□□ 0.53
CCNE1-202ENST00000357943 ERC1Q8IUD2 1116 aa18.37■□□□□ 0.53
CCNE1-202ENST00000357943 SMC5Q8IY18 1101 aa18.37■□□□□ 0.53
CCNE1-202ENST00000357943 TBC1D16Q8TBP0 767 aa18.37■□□□□ 0.53
CCNE1-202ENST00000357943 KIF1BPQ96EK5 621 aa18.37■□□□□ 0.53
CCNE1-202ENST00000357943 GPR101Q96P66 508 aaPredicted RBP18.37■□□□□ 0.53
CCNE1-202ENST00000357943 IL1RAPL2Q9NP60 686 aa18.37■□□□□ 0.53
CCNE1-202ENST00000357943 GGA1Q9UJY5 639 aa18.37■□□□□ 0.53
CCNE1-202ENST00000357943 DUOX1Q9NRD9 1551 aa18.36■□□□□ 0.53
CCNE1-202ENST00000357943 NFKBIEO00221 500 aa18.36■□□□□ 0.53
CCNE1-202ENST00000357943 UFL1O94874 794 aa18.36■□□□□ 0.53
CCNE1-202ENST00000357943 BCL11AQ9H165 835 aa18.36■□□□□ 0.53
CCNE1-202ENST00000357943 ARFGEF1Q9Y6D6 1849 aa18.36■□□□□ 0.53
CCNE1-202ENST00000357943 LTBP1Q14766 1721 aa18.35■□□□□ 0.53
CCNE1-202ENST00000357943 ZNF804BA4D1E1 1349 aa18.35■□□□□ 0.53
CCNE1-202ENST00000357943 C6orf229H3BNL8 230 aa18.35■□□□□ 0.53
CCNE1-202ENST00000357943 SMARCA5O60264 1052 aaPredicted RBP18.35■□□□□ 0.53
CCNE1-202ENST00000357943 FGFR2P21802 821 aa18.35■□□□□ 0.53
CCNE1-202ENST00000357943 ATP2B4P23634 1241 aa18.35■□□□□ 0.53
CCNE1-202ENST00000357943 GRIPAP1Q4V328 841 aa18.35■□□□□ 0.53
CCNE1-202ENST00000357943 LRRCC1Q9C099 1032 aa18.35■□□□□ 0.53
CCNE1-202ENST00000357943 LEMD3Q9Y2U8 911 aa18.35■□□□□ 0.53
CCNE1-202ENST00000357943 A0A1B0GUL6 1792 aa18.35■□□□□ 0.53
CCNE1-202ENST00000357943 KLRK1P26718 216 aa18.34■□□□□ 0.53
CCNE1-202ENST00000357943 KCNJ4P48050 445 aa18.34■□□□□ 0.53
CCNE1-202ENST00000357943 PUM3Q15397 648 aaKnown RBP18.34■□□□□ 0.53
CCNE1-202ENST00000357943 PSMD1Q99460 953 aa18.34■□□□□ 0.53
CCNE1-202ENST00000357943 RTFDC1Q9BY42 306 aaPredicted RBP18.34■□□□□ 0.53
CCNE1-202ENST00000357943 KDM2BQ8NHM5 1336 aa18.34■□□□□ 0.53
CCNE1-202ENST00000357943 TIMM10P62072 90 aa18.34■□□□□ 0.53
CCNE1-202ENST00000357943 FKBP4Q02790 459 aaKnown RBP eCLIP18.34■□□□□ 0.53
CCNE1-202ENST00000357943 UBE4AQ14139 1066 aa18.34■□□□□ 0.53
CCNE1-202ENST00000357943 TNNI3KQ59H18 835 aa18.34■□□□□ 0.53
CCNE1-202ENST00000357943 ANKRD45Q5TZF3 282 aa18.34■□□□□ 0.53
CCNE1-202ENST00000357943 ARHGAP27Q6ZUM4 889 aa18.34■□□□□ 0.53
CCNE1-202ENST00000357943 FPGT-TNNI3KV9GXZ4 949 aa18.34■□□□□ 0.53
CCNE1-202ENST00000357943 A0A1B0GUL7 405 aa18.33■□□□□ 0.52
CCNE1-202ENST00000357943 RASSF7Q02833 373 aa18.33■□□□□ 0.52
CCNE1-202ENST00000357943 ATP2B3Q16720 1220 aa18.33■□□□□ 0.52
CCNE1-202ENST00000357943 TXNRD3Q86VQ6 643 aa18.33■□□□□ 0.52
CCNE1-202ENST00000357943 LPIN2Q92539 896 aa18.33■□□□□ 0.52
CCNE1-202ENST00000357943 EAF2Q96CJ1 260 aaPredicted RBP18.33■□□□□ 0.52
CCNE1-202ENST00000357943 TAOK3Q9H2K8 898 aa18.33■□□□□ 0.52
CCNE1-202ENST00000357943 GPR108Q9NPR9 543 aa18.32■□□□□ 0.52
CCNE1-202ENST00000357943 ZNF277Q9NRM2 450 aaPredicted RBP18.32■□□□□ 0.52
CCNE1-202ENST00000357943 AKAP2Q9Y2D5 859 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms