RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 ZC3H12CQ9C0D7 883 aaKnown RBP20.78■□□□□ 0.92
IFT20-202ENST00000357896 GPSM2P81274 684 aa20.77■□□□□ 0.92
IFT20-202ENST00000357896 HDAC9Q9UKV0 1011 aa20.77■□□□□ 0.92
IFT20-202ENST00000357896 G3V3G9 751 aa20.76■□□□□ 0.91
IFT20-202ENST00000357896 DCAF8Q5TAQ9 597 aa20.76■□□□□ 0.91
IFT20-202ENST00000357896 RASAL3Q86YV0 1011 aa20.76■□□□□ 0.91
IFT20-202ENST00000357896 TBC1D16Q8TBP0 767 aa20.76■□□□□ 0.91
IFT20-202ENST00000357896 NECTIN2Q92692 538 aa20.76■□□□□ 0.91
IFT20-202ENST00000357896 POLR2AP24928 1970 aaKnown RBP20.76■□□□□ 0.91
IFT20-202ENST00000357896 RPS8P62241 208 aaKnown RBP20.75■□□□□ 0.91
IFT20-202ENST00000357896 FAM89AQ96GI7 184 aa20.75■□□□□ 0.91
IFT20-202ENST00000357896 RIPK4P57078 832 aa20.74■□□□□ 0.91
IFT20-202ENST00000357896 ZNF280AP59817 542 aaPredicted RBP20.74■□□□□ 0.91
IFT20-202ENST00000357896 SCARF1Q14162 830 aa20.74■□□□□ 0.91
IFT20-202ENST00000357896 ANGEL2Q5VTE6 544 aaKnown RBP20.74■□□□□ 0.91
IFT20-202ENST00000357896 AGBL3Q8NEM8 1001 aa20.74■□□□□ 0.91
IFT20-202ENST00000357896 PLBD2Q8NHP8 589 aa20.74■□□□□ 0.91
IFT20-202ENST00000357896 TAF1P21675 1872 aa20.73■□□□□ 0.91
IFT20-202ENST00000357896 LMOD3Q0VAK6 560 aa20.73■□□□□ 0.91
IFT20-202ENST00000357896 ANKRD13DQ6ZTN6 518 aa20.73■□□□□ 0.91
IFT20-202ENST00000357896 PODXL2Q9NZ53 605 aa20.73■□□□□ 0.91
IFT20-202ENST00000357896 ZNF296Q8WUU4 475 aaPredicted RBP20.72■□□□□ 0.91
IFT20-202ENST00000357896 GCC1Q96CN9 775 aa20.72■□□□□ 0.91
IFT20-202ENST00000357896 ISCA1Q9BUE6 129 aa20.72■□□□□ 0.91
IFT20-202ENST00000357896 ASTN2O75129 1339 aaPredicted RBP20.72■□□□□ 0.91
IFT20-202ENST00000357896 DDX60Q8IY21 1712 aaKnown RBP20.71■□□□□ 0.91
IFT20-202ENST00000357896 HSP90B1P14625 803 aaKnown RBP20.71■□□□□ 0.91
IFT20-202ENST00000357896 NOM1Q5C9Z4 860 aaKnown RBP20.71■□□□□ 0.91
IFT20-202ENST00000357896 RSBN1LQ6PCB5 846 aaPredicted RBP20.71■□□□□ 0.91
IFT20-202ENST00000357896 ZNF428Q96B54 188 aa20.71■□□□□ 0.91
IFT20-202ENST00000357896 ANKIB1Q9P2G1 1089 aa20.71■□□□□ 0.91
IFT20-202ENST00000357896 PITPNM2Q9BZ72 1349 aa20.71■□□□□ 0.91
IFT20-202ENST00000357896 ZNF609O15014 1411 aa20.7■□□□□ 0.9
IFT20-202ENST00000357896 ATP5J2-PTCD1G3V325 749 aa20.69■□□□□ 0.9
IFT20-202ENST00000357896 IRS4O14654 1257 aaPredicted RBP20.69■□□□□ 0.9
IFT20-202ENST00000357896 UFL1O94874 794 aa20.69■□□□□ 0.9
IFT20-202ENST00000357896 TBC1D8O95759 1140 aa20.69■□□□□ 0.9
IFT20-202ENST00000357896 USP17L8P0C7I0 530 aa20.69■□□□□ 0.9
IFT20-202ENST00000357896 TRIM28Q13263 835 aaKnown RBP20.69■□□□□ 0.9
IFT20-202ENST00000357896 MYOZ2Q9NPC6 264 aa20.69■□□□□ 0.9
IFT20-202ENST00000357896 CHPF2Q9P2E5 772 aa20.69■□□□□ 0.9
IFT20-202ENST00000357896 GGA1Q9UJY5 639 aa20.69■□□□□ 0.9
IFT20-202ENST00000357896 PAPPA2Q9BXP8 1791 aa20.68■□□□□ 0.9
IFT20-202ENST00000357896 TM4SF4P48230 202 aa20.68■□□□□ 0.9
IFT20-202ENST00000357896 FBXO46Q6PJ61 603 aaPredicted RBP20.68■□□□□ 0.9
IFT20-202ENST00000357896 RTL5Q5HYW3 569 aaPredicted RBP20.67■□□□□ 0.9
IFT20-202ENST00000357896 DBF4Q9UBU7 674 aaPredicted RBP20.67■□□□□ 0.9
IFT20-202ENST00000357896 GPR25O00155 361 aa20.66■□□□□ 0.9
IFT20-202ENST00000357896 HDGFL1Q5TGJ6 251 aa20.66■□□□□ 0.9
IFT20-202ENST00000357896 UBE2Q2LH0YL09 131 aa20.65■□□□□ 0.9
IFT20-202ENST00000357896 CHL1O00533 1208 aa20.65■□□□□ 0.9
IFT20-202ENST00000357896 HOXB7P09629 217 aa20.65■□□□□ 0.9
IFT20-202ENST00000357896 TMPOP42166 694 aaKnown RBP20.65■□□□□ 0.9
IFT20-202ENST00000357896 SREBF2Q12772 1141 aa20.65■□□□□ 0.9
IFT20-202ENST00000357896 TTLL12Q14166 644 aaPredicted RBP20.65■□□□□ 0.9
IFT20-202ENST00000357896 PODNQ7Z5L7 613 aa20.65■□□□□ 0.9
IFT20-202ENST00000357896 GMLQ99445 158 aa20.65■□□□□ 0.9
IFT20-202ENST00000357896 HYPKQ9NX55 129 aa20.65■□□□□ 0.9
IFT20-202ENST00000357896 USP17L3A6NCW0 530 aa20.64■□□□□ 0.89
IFT20-202ENST00000357896 USP17L4A6NCW7 530 aa20.64■□□□□ 0.89
IFT20-202ENST00000357896 NF2P35240 595 aa20.64■□□□□ 0.89
IFT20-202ENST00000357896 MOB2Q70IA6 237 aa20.64■□□□□ 0.89
IFT20-202ENST00000357896 USP17L1Q7RTZ2 530 aa20.64■□□□□ 0.89
IFT20-202ENST00000357896 ZBTB38Q8NAP3 1195 aaPredicted RBP20.64■□□□□ 0.89
IFT20-202ENST00000357896 SCN9AQ15858 1988 aa20.64■□□□□ 0.89
IFT20-202ENST00000357896 FKTNO75072 461 aa20.63■□□□□ 0.89
IFT20-202ENST00000357896 KRT24Q2M2I5 525 aa20.63■□□□□ 0.89
IFT20-202ENST00000357896 CCDC152Q4G0S7 254 aa20.63■□□□□ 0.89
IFT20-202ENST00000357896 CFHR5Q9BXR6 569 aa20.63■□□□□ 0.89
IFT20-202ENST00000357896 SEC31BQ9NQW1 1179 aa20.63■□□□□ 0.89
IFT20-202ENST00000357896 XDHP47989 1333 aa20.62■□□□□ 0.89
IFT20-202ENST00000357896 OGFOD1Q8N543 542 aa20.62■□□□□ 0.89
IFT20-202ENST00000357896 LAS1LQ9Y4W2 734 aaKnown RBP20.61■□□□□ 0.89
IFT20-202ENST00000357896 COL4A1P02462 1669 aa20.61■□□□□ 0.89
IFT20-202ENST00000357896 ALDH1A1P00352 501 aa20.6■□□□□ 0.89
IFT20-202ENST00000357896 ATP2B4P23634 1241 aa20.6■□□□□ 0.89
IFT20-202ENST00000357896 NBPF9Q3BBW0 867 aa20.6■□□□□ 0.89
IFT20-202ENST00000357896 PRAMEF18Q5VWM3 479 aa20.6■□□□□ 0.89
IFT20-202ENST00000357896 RIC3Q7Z5B4 369 aa20.6■□□□□ 0.89
IFT20-202ENST00000357896 MMP14P50281 582 aa20.59■□□□□ 0.89
IFT20-202ENST00000357896 SCAF8Q9UPN6 1271 aaKnown RBP20.59■□□□□ 0.89
IFT20-202ENST00000357896 GOLGA2Q08379 1002 aa20.58■□□□□ 0.89
IFT20-202ENST00000357896 MKRN3Q13064 507 aaKnown RBP20.58■□□□□ 0.89
IFT20-202ENST00000357896 NEUROD2Q15784 382 aa20.58■□□□□ 0.89
IFT20-202ENST00000357896 INTS3Q68E01 1043 aaKnown RBP20.58■□□□□ 0.89
IFT20-202ENST00000357896 ARMC9Q7Z3E5 817 aa20.58■□□□□ 0.89
IFT20-202ENST00000357896 ANKRD18AQ8IVF6 992 aa20.58■□□□□ 0.89
IFT20-202ENST00000357896 MYO3BQ8WXR4 1341 aa20.57■□□□□ 0.88
IFT20-202ENST00000357896 PDE8AO60658 829 aa20.57■□□□□ 0.88
IFT20-202ENST00000357896 INHBEP58166 350 aa20.57■□□□□ 0.88
IFT20-202ENST00000357896 HABP4Q5JVS0 413 aaKnown RBP20.57■□□□□ 0.88
IFT20-202ENST00000357896 WNT10BO00744 389 aa20.56■□□□□ 0.88
IFT20-202ENST00000357896 PCCAP05165 728 aaPredicted RBP20.56■□□□□ 0.88
IFT20-202ENST00000357896 CCDC191Q8NCU4 936 aa20.56■□□□□ 0.88
IFT20-202ENST00000357896 PSME4Q14997 1843 aa20.55■□□□□ 0.88
IFT20-202ENST00000357896 PTPN12Q05209 780 aaKnown RBP20.55■□□□□ 0.88
IFT20-202ENST00000357896 DACT2Q5SW24 774 aa20.55■□□□□ 0.88
IFT20-202ENST00000357896 DUSP27Q5VZP5 1158 aa20.55■□□□□ 0.88
IFT20-202ENST00000357896 STRIP1Q5VSL9 837 aa20.54■□□□□ 0.88
IFT20-202ENST00000357896 SPRYD7Q5W111 196 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms