RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 SSH1Q8WYL5 1049 aa11.4□□□□□ -0.59
COL11A1-201ENST00000353414 KIF21BO75037 1637 aa11.4□□□□□ -0.59
COL11A1-201ENST00000353414 SELENOSQ9BQE4 189 aa11.39□□□□□ -0.59
COL11A1-201ENST00000353414 STXBP4Q6ZWJ1 553 aa11.39□□□□□ -0.59
COL11A1-201ENST00000353414 PHAXQ9H814 394 aaKnown RBP11.39□□□□□ -0.59
COL11A1-201ENST00000353414 CCDC114Q96M63 670 aa11.39□□□□□ -0.59
COL11A1-201ENST00000353414 PFDN4Q9NQP4 134 aa11.39□□□□□ -0.59
COL11A1-201ENST00000353414 CHPF2Q9P2E5 772 aa11.39□□□□□ -0.59
COL11A1-201ENST00000353414 CCDC61Q9Y6R9 512 aa11.39□□□□□ -0.59
COL11A1-201ENST00000353414 MAGEB6Q8N7X4 407 aa11.39□□□□□ -0.59
COL11A1-201ENST00000353414 TPD52P55327 224 aaPredicted RBP11.39□□□□□ -0.59
COL11A1-201ENST00000353414 FAM160A1Q05DH4 1040 aa11.39□□□□□ -0.59
COL11A1-201ENST00000353414 IQCGQ9H095 443 aaKnown RBP11.39□□□□□ -0.59
COL11A1-201ENST00000353414 IGF1RP08069 1367 aa11.39□□□□□ -0.59
COL11A1-201ENST00000353414 MSH6P52701 1360 aa11.39□□□□□ -0.59
COL11A1-201ENST00000353414 KLF18A0A0U1RQI7 1052 aa11.39□□□□□ -0.59
COL11A1-201ENST00000353414 DNAJC21Q5F1R6 531 aaKnown RBP11.39□□□□□ -0.59
COL11A1-201ENST00000353414 DCAF17Q5H9S7 520 aaPredicted RBP11.39□□□□□ -0.59
COL11A1-201ENST00000353414 GIMAP6Q6P9H5 292 aa11.39□□□□□ -0.59
COL11A1-201ENST00000353414 GPCPD1Q9NPB8 672 aa11.39□□□□□ -0.59
COL11A1-201ENST00000353414 TTLL3Q9Y4R7 772 aa11.39□□□□□ -0.59
COL11A1-201ENST00000353414 FCHSD2O94868 740 aa11.38□□□□□ -0.59
COL11A1-201ENST00000353414 CCDC12Q8WUD4 166 aaPredicted RBP11.38□□□□□ -0.59
COL11A1-201ENST00000353414 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.38□□□□□ -0.59
COL11A1-201ENST00000353414 PPANQ9NQ55 473 aaKnown RBP11.38□□□□□ -0.59
COL11A1-201ENST00000353414 CFAP65Q6ZU64 1925 aaKnown RBP11.38□□□□□ -0.59
COL11A1-201ENST00000353414 NBPF14Q5TI25 921 aa11.38□□□□□ -0.59
COL11A1-201ENST00000353414 KIF18AQ8NI77 898 aa11.38□□□□□ -0.59
COL11A1-201ENST00000353414 NAA16Q6N069 864 aaPredicted RBP11.38□□□□□ -0.59
COL11A1-201ENST00000353414 N4BP3O15049 544 aa11.38□□□□□ -0.59
COL11A1-201ENST00000353414 TNNI2P48788 182 aa11.38□□□□□ -0.59
COL11A1-201ENST00000353414 DHX58Q96C10 678 aa11.38□□□□□ -0.59
COL11A1-201ENST00000353414 EPRSP07814 1512 aaKnown RBP11.37□□□□□ -0.59
COL11A1-201ENST00000353414 JDP2Q8WYK2 163 aa11.37□□□□□ -0.59
COL11A1-201ENST00000353414 MCM4P33991 863 aa11.37□□□□□ -0.59
COL11A1-201ENST00000353414 STX17P56962 302 aa11.37□□□□□ -0.59
COL11A1-201ENST00000353414 MAK16Q9BXY0 300 aaKnown RBP11.37□□□□□ -0.59
COL11A1-201ENST00000353414 LDHCP07864 332 aa11.37□□□□□ -0.59
COL11A1-201ENST00000353414 ASIC1P78348 528 aa11.37□□□□□ -0.59
COL11A1-201ENST00000353414 NCOA7Q8NI08 942 aa11.37□□□□□ -0.59
COL11A1-201ENST00000353414 MAGEB6P1A0A0J9YX57 407 aa11.37□□□□□ -0.59
COL11A1-201ENST00000353414 RNASE9P60153 205 aaKnown RBP11.37□□□□□ -0.59
COL11A1-201ENST00000353414 GSTO1P78417 241 aa11.37□□□□□ -0.59
COL11A1-201ENST00000353414 CCDC6Q16204 474 aa11.37□□□□□ -0.59
COL11A1-201ENST00000353414 AMOTQ4VCS5 1084 aa11.37□□□□□ -0.59
COL11A1-201ENST00000353414 FBF1Q8TES7 1133 aa11.37□□□□□ -0.59
COL11A1-201ENST00000353414 NEK1Q96PY6 1258 aa11.37□□□□□ -0.59
COL11A1-201ENST00000353414 SPDYE3A6NKU9 549 aa11.37□□□□□ -0.59
COL11A1-201ENST00000353414 HGSO14964 777 aaPredicted RBP11.37□□□□□ -0.59
COL11A1-201ENST00000353414 MYCLP12524 364 aaPredicted RBP11.37□□□□□ -0.59
COL11A1-201ENST00000353414 SMC1BQ8NDV3 1235 aa11.37□□□□□ -0.59
COL11A1-201ENST00000353414 ALG1Q9BT22 464 aa11.37□□□□□ -0.59
COL11A1-201ENST00000353414 CRCPO75575 148 aa11.36□□□□□ -0.59
COL11A1-201ENST00000353414 ABL1P00519 1130 aa11.36□□□□□ -0.59
COL11A1-201ENST00000353414 NACA2Q9H009 215 aa11.36□□□□□ -0.59
COL11A1-201ENST00000353414 PA2G4Q9UQ80 394 aaKnown RBP11.36□□□□□ -0.59
COL11A1-201ENST00000353414 DNMBPQ6XZF7 1577 aa11.36□□□□□ -0.59
COL11A1-201ENST00000353414 LRRC59Q96AG4 307 aaKnown RBP11.36□□□□□ -0.59
COL11A1-201ENST00000353414 BEGAINQ9BUH8 593 aa11.36□□□□□ -0.59
COL11A1-201ENST00000353414 LRPPRCP42704 1394 aaKnown RBP11.36□□□□□ -0.59
COL11A1-201ENST00000353414 MAP7D1Q3KQU3 841 aa11.36□□□□□ -0.59
COL11A1-201ENST00000353414 SPATA24Q86W54 205 aa11.36□□□□□ -0.59
COL11A1-201ENST00000353414 MCM9Q9NXL9 1143 aa11.36□□□□□ -0.59
COL11A1-201ENST00000353414 TTC36A6NLP5 189 aa11.36□□□□□ -0.59
COL11A1-201ENST00000353414 HSF2BPO75031 334 aa11.36□□□□□ -0.59
COL11A1-201ENST00000353414 TCP10Q12799 353 aa11.36□□□□□ -0.59
COL11A1-201ENST00000353414 MSL1Q68DK7 614 aa11.36□□□□□ -0.59
COL11A1-201ENST00000353414 SNX16P57768 344 aa11.36□□□□□ -0.59
COL11A1-201ENST00000353414 AAMPQ13685 434 aa11.36□□□□□ -0.59
COL11A1-201ENST00000353414 CEP135Q66GS9 1140 aa11.36□□□□□ -0.59
COL11A1-201ENST00000353414 SPAG5Q96R06 1193 aa11.36□□□□□ -0.59
COL11A1-201ENST00000353414 ADCY5O95622 1261 aa11.36□□□□□ -0.59
COL11A1-201ENST00000353414 RTN1Q16799 776 aa11.36□□□□□ -0.59
COL11A1-201ENST00000353414 FCHSD1Q86WN1 690 aa11.36□□□□□ -0.59
COL11A1-201ENST00000353414 LRRC45Q96CN5 670 aa11.36□□□□□ -0.59
COL11A1-201ENST00000353414 CLGNO14967 610 aa11.35□□□□□ -0.59
COL11A1-201ENST00000353414 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.35□□□□□ -0.59
COL11A1-201ENST00000353414 EVI5LQ96CN4 794 aa11.35□□□□□ -0.59
COL11A1-201ENST00000353414 IMPG2Q9BZV3 1241 aa11.35□□□□□ -0.59
COL11A1-201ENST00000353414 ZC3H12CQ9C0D7 883 aaKnown RBP11.35□□□□□ -0.59
COL11A1-201ENST00000353414 PPP1R12AO14974 1030 aaPredicted RBP11.35□□□□□ -0.59
COL11A1-201ENST00000353414 RAPGEF1Q13905 1077 aa11.35□□□□□ -0.59
COL11A1-201ENST00000353414 ZNF804AQ7Z570 1209 aa11.35□□□□□ -0.59
COL11A1-201ENST00000353414 NLRP3Q96P20 1036 aa11.35□□□□□ -0.59
COL11A1-201ENST00000353414 NAA15Q9BXJ9 866 aaKnown RBP11.35□□□□□ -0.59
COL11A1-201ENST00000353414 DBF4Q9UBU7 674 aaPredicted RBP11.35□□□□□ -0.59
COL11A1-201ENST00000353414 DTNBO60941 627 aa11.35□□□□□ -0.59
COL11A1-201ENST00000353414 KSR1Q8IVT5 923 aa11.35□□□□□ -0.59
COL11A1-201ENST00000353414 CCDC117Q8IWD4 279 aaPredicted RBP11.35□□□□□ -0.59
COL11A1-201ENST00000353414 IFNL2Q8IZJ0 200 aa11.35□□□□□ -0.59
COL11A1-201ENST00000353414 XAGE3Q8WTP9 111 aa11.35□□□□□ -0.59
COL11A1-201ENST00000353414 SMARCC1Q92922 1105 aaPredicted RBP11.35□□□□□ -0.59
COL11A1-201ENST00000353414 LIMCH1Q9UPQ0 1083 aa11.35□□□□□ -0.59
COL11A1-201ENST00000353414 LRRC9Q6ZRR7 1453 aa11.35□□□□□ -0.59
COL11A1-201ENST00000353414 AKR1B10O60218 316 aa11.35□□□□□ -0.59
COL11A1-201ENST00000353414 GNG11P61952 73 aa11.35□□□□□ -0.59
COL11A1-201ENST00000353414 IFRD2Q12894 506 aaPredicted RBP11.35□□□□□ -0.59
COL11A1-201ENST00000353414 RPAP2Q8IXW5 612 aaPredicted RBP11.35□□□□□ -0.59
COL11A1-201ENST00000353414 HMGB1P09429 215 aaKnown RBP11.35□□□□□ -0.59
COL11A1-201ENST00000353414 ZBTB16Q05516 673 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms