RNA–Protein interactions for RNA: ENST00000353278.8

SLC6A20-201, Transcript of solute carrier family 6 member 20, humanhuman

TSL 1 (best) BASIC

Gene SLC6A20, Length 5,247 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-201ENST00000353278 PICK1Q9NRD5 415 aa12.9□□□□□ -0.34
SLC6A20-201ENST00000353278 MAST3O60307 1309 aa12.9□□□□□ -0.34
SLC6A20-201ENST00000353278 GGA1Q9UJY5 639 aa12.9□□□□□ -0.34
SLC6A20-201ENST00000353278 H0YHG0 523 aa12.89□□□□□ -0.35
SLC6A20-201ENST00000353278 PRIM1P49642 420 aaKnown RBP12.89□□□□□ -0.35
SLC6A20-201ENST00000353278 MACROD2A1Z1Q3 448 aa12.89□□□□□ -0.35
SLC6A20-201ENST00000353278 PRKCSHP14314 528 aaPredicted RBP12.89□□□□□ -0.35
SLC6A20-201ENST00000353278 CTNNA2P26232 953 aa12.89□□□□□ -0.35
SLC6A20-201ENST00000353278 ZNF408Q9H9D4 720 aa12.89□□□□□ -0.35
SLC6A20-201ENST00000353278 DDX19AQ9NUU7 478 aaKnown RBP12.89□□□□□ -0.35
SLC6A20-201ENST00000353278 CENPHQ9H3R5 247 aa12.89□□□□□ -0.35
SLC6A20-201ENST00000353278 PRAG1Q86YV5 1406 aa12.89□□□□□ -0.35
SLC6A20-201ENST00000353278 PRC1O43663 620 aa12.89□□□□□ -0.35
SLC6A20-201ENST00000353278 USO1O60763 962 aaKnown RBP12.89□□□□□ -0.35
SLC6A20-201ENST00000353278 TOP1P11387 765 aaKnown RBP12.89□□□□□ -0.35
SLC6A20-201ENST00000353278 GJB2P29033 226 aa12.89□□□□□ -0.35
SLC6A20-201ENST00000353278 CWF19L2Q2TBE0 894 aaKnown RBP12.89□□□□□ -0.35
SLC6A20-201ENST00000353278 ZNF790Q6PG37 636 aa12.89□□□□□ -0.35
SLC6A20-201ENST00000353278 PUF60Q9UHX1 559 aaKnown RBP12.89□□□□□ -0.35
SLC6A20-201ENST00000353278 BRPF3Q9ULD4 1205 aa12.89□□□□□ -0.35
SLC6A20-201ENST00000353278 CCDC183Q5T5S1 534 aa12.88□□□□□ -0.35
SLC6A20-201ENST00000353278 TBC1D9Q6ZT07 1266 aa12.88□□□□□ -0.35
SLC6A20-201ENST00000353278 RRP36Q96EU6 259 aaKnown RBP12.88□□□□□ -0.35
SLC6A20-201ENST00000353278 TCHPQ9BT92 498 aa12.88□□□□□ -0.35
SLC6A20-201ENST00000353278 CALML3P27482 149 aa12.88□□□□□ -0.35
SLC6A20-201ENST00000353278 CCDC102BQ68D86 513 aa12.88□□□□□ -0.35
SLC6A20-201ENST00000353278 DPP8Q6V1X1 898 aaPredicted RBP12.88□□□□□ -0.35
SLC6A20-201ENST00000353278 FLAD1Q8NFF5 587 aa12.88□□□□□ -0.35
SLC6A20-201ENST00000353278 FERMT1Q9BQL6 677 aa12.88□□□□□ -0.35
SLC6A20-201ENST00000353278 YEATS4O95619 227 aa12.88□□□□□ -0.35
SLC6A20-201ENST00000353278 KIAA0556O60303 1618 aa12.88□□□□□ -0.35
SLC6A20-201ENST00000353278 RTL9Q8NET4 1388 aa12.88□□□□□ -0.35
SLC6A20-201ENST00000353278 TEX11Q8IYF3 940 aa12.88□□□□□ -0.35
SLC6A20-201ENST00000353278 MRPL50Q8N5N7 158 aaKnown RBP12.88□□□□□ -0.35
SLC6A20-201ENST00000353278 MAGEB6Q8N7X4 407 aa12.88□□□□□ -0.35
SLC6A20-201ENST00000353278 TSPYL1Q9H0U9 437 aa12.88□□□□□ -0.35
SLC6A20-201ENST00000353278 EXOC1Q9NV70 894 aa12.88□□□□□ -0.35
SLC6A20-201ENST00000353278 TMOD4Q9NZQ9 345 aa12.88□□□□□ -0.35
SLC6A20-201ENST00000353278 HOOK3Q86VS8 718 aa12.87□□□□□ -0.35
SLC6A20-201ENST00000353278 PLBD2Q8NHP8 589 aa12.87□□□□□ -0.35
SLC6A20-201ENST00000353278 ALG1Q9BT22 464 aa12.87□□□□□ -0.35
SLC6A20-201ENST00000353278 PANK2Q9BZ23 570 aa12.87□□□□□ -0.35
SLC6A20-201ENST00000353278 PA2G4Q9UQ80 394 aaKnown RBP12.87□□□□□ -0.35
SLC6A20-201ENST00000353278 BRDTQ58F21 947 aaPredicted RBP12.87□□□□□ -0.35
SLC6A20-201ENST00000353278 MPNDQ8N594 471 aa12.87□□□□□ -0.35
SLC6A20-201ENST00000353278 MIGA1Q8NAN2 632 aa12.87□□□□□ -0.35
SLC6A20-201ENST00000353278 LARP6Q9BRS8 491 aaKnown RBP12.87□□□□□ -0.35
SLC6A20-201ENST00000353278 POLR3AO14802 1390 aaPredicted RBP12.87□□□□□ -0.35
SLC6A20-201ENST00000353278 ADAMTS12P58397 1594 aa12.87□□□□□ -0.35
SLC6A20-201ENST00000353278 RNF113AO15541 343 aaKnown RBP12.87□□□□□ -0.35
SLC6A20-201ENST00000353278 ZSCAN12O43309 604 aa12.87□□□□□ -0.35
SLC6A20-201ENST00000353278 PHACTR2O75167 634 aa12.87□□□□□ -0.35
SLC6A20-201ENST00000353278 EIF3JO75822 258 aaKnown RBP12.87□□□□□ -0.35
SLC6A20-201ENST00000353278 HIBADHP31937 336 aaKnown RBP12.87□□□□□ -0.35
SLC6A20-201ENST00000353278 PDE1AP54750 535 aa12.87□□□□□ -0.35
SLC6A20-201ENST00000353278 NUP88Q99567 741 aaPredicted RBP12.87□□□□□ -0.35
SLC6A20-201ENST00000353278 RMND1Q9NWS8 449 aa12.87□□□□□ -0.35
SLC6A20-201ENST00000353278 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.87□□□□□ -0.35
SLC6A20-201ENST00000353278 ZSCAN16Q9H4T2 348 aaPredicted RBP12.87□□□□□ -0.35
SLC6A20-201ENST00000353278 RBM8AQ9Y5S9 174 aaKnown RBP12.87□□□□□ -0.35
SLC6A20-201ENST00000353278 SBNO1A3KN83 1393 aa12.87□□□□□ -0.35
SLC6A20-201ENST00000353278 GPR162Q16538 588 aa12.86□□□□□ -0.35
SLC6A20-201ENST00000353278 CTNNBL1Q8WYA6 563 aaPredicted RBP12.86□□□□□ -0.35
SLC6A20-201ENST00000353278 FAM89AQ96GI7 184 aa12.86□□□□□ -0.35
SLC6A20-201ENST00000353278 TFIP11Q9UBB9 837 aaKnown RBP12.86□□□□□ -0.35
SLC6A20-201ENST00000353278 TTC41PQ6P2S7 1318 aa12.86□□□□□ -0.35
SLC6A20-201ENST00000353278 ECM2O94769 699 aaPredicted RBP12.86□□□□□ -0.35
SLC6A20-201ENST00000353278 CCDC172P0C7W6 258 aa12.86□□□□□ -0.35
SLC6A20-201ENST00000353278 BABAM1Q9NWV8 329 aa12.86□□□□□ -0.35
SLC6A20-201ENST00000353278 IVNS1ABPQ9Y6Y0 642 aa12.86□□□□□ -0.35
SLC6A20-201ENST00000353278 A0A1W2PP64 1363 aa12.86□□□□□ -0.35
SLC6A20-201ENST00000353278 GSTTP1A0A1W2PQM5 241 aa12.86□□□□□ -0.35
SLC6A20-201ENST00000353278 KRT13P13646 458 aa12.86□□□□□ -0.35
SLC6A20-201ENST00000353278 SYCE3A1L190 88 aa12.86□□□□□ -0.35
SLC6A20-201ENST00000353278 PDE8AO60658 829 aa12.86□□□□□ -0.35
SLC6A20-201ENST00000353278 IMPG2Q9BZV3 1241 aa12.86□□□□□ -0.35
SLC6A20-201ENST00000353278 HDAC1Q13547 482 aaPredicted RBP12.85□□□□□ -0.35
SLC6A20-201ENST00000353278 MTERF4Q7Z6M4 381 aaKnown RBP12.85□□□□□ -0.35
SLC6A20-201ENST00000353278 NIM1KQ8IY84 436 aa12.85□□□□□ -0.35
SLC6A20-201ENST00000353278 MAP7D2Q96T17 732 aa12.85□□□□□ -0.35
SLC6A20-201ENST00000353278 JAG2Q9Y219 1238 aa12.85□□□□□ -0.35
SLC6A20-201ENST00000353278 HCLS1P14317 486 aaPredicted RBP12.85□□□□□ -0.35
SLC6A20-201ENST00000353278 GNA11P29992 359 aa12.85□□□□□ -0.35
SLC6A20-201ENST00000353278 CERS3Q8IU89 383 aa12.85□□□□□ -0.35
SLC6A20-201ENST00000353278 GRPEL1Q9HAV7 217 aa12.85□□□□□ -0.35
SLC6A20-201ENST00000353278 CWC15Q9P013 229 aaKnown RBP12.85□□□□□ -0.35
SLC6A20-201ENST00000353278 KIF5CO60282 957 aa12.85□□□□□ -0.35
SLC6A20-201ENST00000353278 KIF4AO95239 1232 aa12.85□□□□□ -0.35
SLC6A20-201ENST00000353278 KIF2AO00139 706 aaPredicted RBP12.85□□□□□ -0.35
SLC6A20-201ENST00000353278 ALDH1B1P30837 517 aa12.85□□□□□ -0.35
SLC6A20-201ENST00000353278 NOD1Q9Y239 953 aa12.85□□□□□ -0.35
SLC6A20-201ENST00000353278 PPFIA3O75145 1194 aa12.84□□□□□ -0.35
SLC6A20-201ENST00000353278 HOXB7P09629 217 aa12.84□□□□□ -0.35
SLC6A20-201ENST00000353278 WDR66Q8TBY9 1149 aa12.84□□□□□ -0.35
SLC6A20-201ENST00000353278 TRIM47Q96LD4 638 aa12.84□□□□□ -0.35
SLC6A20-201ENST00000353278 ARHGEF10LQ9HCE6 1279 aa12.84□□□□□ -0.35
SLC6A20-201ENST00000353278 BACH1O14867 736 aa12.84□□□□□ -0.35
SLC6A20-201ENST00000353278 ITGA6P23229 1130 aa12.84□□□□□ -0.35
SLC6A20-201ENST00000353278 STAT6P42226 847 aa12.84□□□□□ -0.35
SLC6A20-201ENST00000353278 PAFAH1B1P43034 410 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms