RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 TM6SF1Q9BZW5 370 aa8.87□□□□□ -0.99
BRCA1-201ENST00000352993 LOC102724159A0A0B4J2E5 919 aa8.87□□□□□ -0.99
BRCA1-201ENST00000352993 SLC27A2O14975 620 aa8.87□□□□□ -0.99
BRCA1-201ENST00000352993 CCP110O43303 1012 aa8.87□□□□□ -0.99
BRCA1-201ENST00000352993 APPP05067 770 aa8.87□□□□□ -0.99
BRCA1-201ENST00000352993 NMIQ13287 307 aaPredicted RBP8.87□□□□□ -0.99
BRCA1-201ENST00000352993 MLECQ14165 292 aa8.87□□□□□ -0.99
BRCA1-201ENST00000352993 PWP2Q15269 919 aaKnown RBP8.87□□□□□ -0.99
BRCA1-201ENST00000352993 TTC31Q49AM3 519 aaPredicted RBP8.87□□□□□ -0.99
BRCA1-201ENST00000352993 ARMCX5Q6P1M9 558 aa8.87□□□□□ -0.99
BRCA1-201ENST00000352993 RBM43Q6ZSC3 357 aaKnown RBP8.87□□□□□ -0.99
BRCA1-201ENST00000352993 AACSQ86V21 672 aa8.87□□□□□ -0.99
BRCA1-201ENST00000352993 MAP2P11137 1827 aaKnown RBP8.87□□□□□ -0.99
BRCA1-201ENST00000352993 GOLGA8FQ08AF8 430 aa8.87□□□□□ -0.99
BRCA1-201ENST00000352993 GOLGA8DPQ0D2H9 430 aa8.87□□□□□ -0.99
BRCA1-201ENST00000352993 HSP90AB4PQ58FF6 505 aa8.87□□□□□ -0.99
BRCA1-201ENST00000352993 HSP90AB2PQ58FF8 381 aa8.87□□□□□ -0.99
BRCA1-201ENST00000352993 IL17RAQ96F46 866 aa8.87□□□□□ -0.99
BRCA1-201ENST00000352993 ECHDC1Q9NTX5 307 aa8.87□□□□□ -0.99
BRCA1-201ENST00000352993 ADAM21Q9UKJ8 722 aa8.87□□□□□ -0.99
BRCA1-201ENST00000352993 COL16A1Q07092 1604 aaPredicted RBP8.87□□□□□ -0.99
BRCA1-201ENST00000352993 PSDA5PKW4 1024 aaPredicted RBP8.86□□□□□ -0.99
BRCA1-201ENST00000352993 CFAP100Q494V2 611 aa8.86□□□□□ -0.99
BRCA1-201ENST00000352993 MUM1L1Q5H9M0 696 aa8.86□□□□□ -0.99
BRCA1-201ENST00000352993 RGS22Q8NE09 1264 aa8.86□□□□□ -0.99
BRCA1-201ENST00000352993 GOLGA5Q8TBA6 731 aa8.86□□□□□ -0.99
BRCA1-201ENST00000352993 SSH3Q8TE77 659 aa8.86□□□□□ -0.99
BRCA1-201ENST00000352993 IFT172Q9UG01 1749 aa8.86□□□□□ -0.99
BRCA1-201ENST00000352993 A0A1B0GVL5 298 aa8.86□□□□□ -0.99
BRCA1-201ENST00000352993 PHACTR2O75167 634 aa8.86□□□□□ -0.99
BRCA1-201ENST00000352993 SASH3O75995 380 aa8.86□□□□□ -0.99
BRCA1-201ENST00000352993 LRRFIP1Q32MZ4 808 aaKnown RBP8.86□□□□□ -0.99
BRCA1-201ENST00000352993 ICE2Q659A1 982 aa8.86□□□□□ -0.99
BRCA1-201ENST00000352993 FBXO18Q8NFZ0 1043 aa8.86□□□□□ -0.99
BRCA1-201ENST00000352993 BOLA2Q9H3K6 86 aa8.86□□□□□ -0.99
BRCA1-201ENST00000352993 DEF6Q9H4E7 631 aa8.86□□□□□ -0.99
BRCA1-201ENST00000352993 IMPACTQ9P2X3 320 aa8.86□□□□□ -0.99
BRCA1-201ENST00000352993 A0A1B0GUL7 405 aa8.86□□□□□ -0.99
BRCA1-201ENST00000352993 EFCAB8A8MWE9 144 aa8.86□□□□□ -0.99
BRCA1-201ENST00000352993 ZRANB2O95218 330 aaKnown RBP eCLIP8.86□□□□□ -0.99
BRCA1-201ENST00000352993 NECTIN1Q15223 517 aa8.86□□□□□ -0.99
BRCA1-201ENST00000352993 HDGFL1Q5TGJ6 251 aa8.86□□□□□ -0.99
BRCA1-201ENST00000352993 CC2D1AQ6P1N0 951 aaPredicted RBP8.86□□□□□ -0.99
BRCA1-201ENST00000352993 SRLQ86TD4 932 aa8.86□□□□□ -0.99
BRCA1-201ENST00000352993 SRRTQ9BXP5 876 aaKnown RBP8.86□□□□□ -0.99
BRCA1-201ENST00000352993 CCDC8Q9H0W5 538 aaPredicted RBP8.86□□□□□ -0.99
BRCA1-201ENST00000352993 GOLPH3LQ9H4A5 285 aa8.86□□□□□ -0.99
BRCA1-201ENST00000352993 PHAXQ9H814 394 aaKnown RBP8.86□□□□□ -0.99
BRCA1-201ENST00000352993 TTC21BQ7Z4L5 1316 aa8.86□□□□□ -0.99
BRCA1-201ENST00000352993 NBPF7P0C2Y1 421 aaPredicted RBP8.85□□□□□ -0.99
BRCA1-201ENST00000352993 RPS6KB1P23443 525 aa8.85□□□□□ -0.99
BRCA1-201ENST00000352993 CCT2P78371 535 aaKnown RBP8.85□□□□□ -0.99
BRCA1-201ENST00000352993 MTHFSDQ2M296 383 aaKnown RBP8.85□□□□□ -0.99
BRCA1-201ENST00000352993 HSP90AA4PQ58FG1 418 aa8.85□□□□□ -0.99
BRCA1-201ENST00000352993 CCDC158Q5M9N0 1113 aa8.85□□□□□ -0.99
BRCA1-201ENST00000352993 CTR9Q6PD62 1173 aa8.85□□□□□ -0.99
BRCA1-201ENST00000352993 CCDC102AQ96A19 550 aa8.85□□□□□ -0.99
BRCA1-201ENST00000352993 ZNF396Q96N95 335 aaPredicted RBP8.85□□□□□ -0.99
BRCA1-201ENST00000352993 ZSCAN16Q9H4T2 348 aaPredicted RBP8.85□□□□□ -0.99
BRCA1-201ENST00000352993 CD163L1Q9NR16 1453 aa8.85□□□□□ -0.99
BRCA1-201ENST00000352993 TADA3O75528 432 aa8.85□□□□□ -0.99
BRCA1-201ENST00000352993 TBC1D8O95759 1140 aa8.85□□□□□ -0.99
BRCA1-201ENST00000352993 FAM160A1Q05DH4 1040 aa8.85□□□□□ -0.99
BRCA1-201ENST00000352993 PPP2R3AQ06190 1150 aa8.85□□□□□ -0.99
BRCA1-201ENST00000352993 TAF7Q15545 349 aaPredicted RBP8.85□□□□□ -0.99
BRCA1-201ENST00000352993 DPCR1Q3MIW9 517 aa8.85□□□□□ -0.99
BRCA1-201ENST00000352993 PA2G4Q9UQ80 394 aaKnown RBP8.85□□□□□ -0.99
BRCA1-201ENST00000352993 ACTN2P35609 894 aa8.85□□□□□ -0.99
BRCA1-201ENST00000352993 RESTQ13127 1097 aa8.85□□□□□ -0.99
BRCA1-201ENST00000352993 STK38Q15208 465 aa8.85□□□□□ -0.99
BRCA1-201ENST00000352993 CCDC93Q567U6 631 aa8.85□□□□□ -0.99
BRCA1-201ENST00000352993 HSP90B2PQ58FF3 399 aa8.85□□□□□ -0.99
BRCA1-201ENST00000352993 NBPF11Q86T75 865 aa8.85□□□□□ -0.99
BRCA1-201ENST00000352993 EVI5LQ96CN4 794 aa8.85□□□□□ -0.99
BRCA1-201ENST00000352993 USP28Q96RU2 1077 aa8.85□□□□□ -0.99
BRCA1-201ENST00000352993 PARD6BQ9BYG5 372 aa8.85□□□□□ -0.99
BRCA1-201ENST00000352993 OSBPL5Q9H0X9 879 aaPredicted RBP8.85□□□□□ -0.99
BRCA1-201ENST00000352993 C9orf78Q9NZ63 289 aaPredicted RBP8.85□□□□□ -0.99
BRCA1-201ENST00000352993 CCDC9Q9Y3X0 531 aaKnown RBP8.85□□□□□ -0.99
BRCA1-201ENST00000352993 MARF1Q9Y4F3 1742 aaKnown RBP8.85□□□□□ -0.99
BRCA1-201ENST00000352993 TAF6LQ9Y6J9 622 aa8.85□□□□□ -0.99
BRCA1-201ENST00000352993 ROBO1Q9Y6N7 1651 aa8.84□□□□□ -0.99
BRCA1-201ENST00000352993 ZSCAN12O43309 604 aa8.84□□□□□ -0.99
BRCA1-201ENST00000352993 SLC26A8Q96RN1 970 aa8.84□□□□□ -0.99
BRCA1-201ENST00000352993 JRKLQ9Y4A0 524 aa8.84□□□□□ -0.99
BRCA1-201ENST00000352993 DLG5Q8TDM6 1919 aa8.84□□□□□ -0.99
BRCA1-201ENST00000352993 ARHGEF28Q8N1W1 1705 aaKnown RBP8.84□□□□□ -0.99
BRCA1-201ENST00000352993 COL22A1Q8NFW1 1626 aaPredicted RBP8.84□□□□□ -0.99
BRCA1-201ENST00000352993 TNRQ92752 1358 aa8.84□□□□□ -0.99
BRCA1-201ENST00000352993 TOP1P11387 765 aaKnown RBP8.84□□□□□ -0.99
BRCA1-201ENST00000352993 NOP2P46087 812 aaKnown RBP8.84□□□□□ -0.99
BRCA1-201ENST00000352993 UBASH3AP57075 661 aa8.84□□□□□ -0.99
BRCA1-201ENST00000352993 SART3Q15020 963 aaKnown RBP8.84□□□□□ -0.99
BRCA1-201ENST00000352993 E2F4Q16254 413 aa8.84□□□□□ -0.99
BRCA1-201ENST00000352993 Q6ZUG5 572 aa8.84□□□□□ -0.99
BRCA1-201ENST00000352993 NFATC2IPQ8NCF5 419 aa8.84□□□□□ -0.99
BRCA1-201ENST00000352993 NPHP4O75161 1426 aaPredicted RBP8.84□□□□□ -0.99
BRCA1-201ENST00000352993 TUBB4AP04350 444 aa8.84□□□□□ -0.99
BRCA1-201ENST00000352993 IVLP07476 585 aa8.84□□□□□ -0.99
BRCA1-201ENST00000352993 SLC3A2P08195 630 aaKnown RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms