RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 CCDC83Q8IWF9 413 aa13.44□□□□□ -0.26
TRAF3-201ENST00000347662 PLCH2O75038 1416 aa13.44□□□□□ -0.26
TRAF3-201ENST00000347662 GBP7Q8N8V2 638 aaPredicted RBP13.44□□□□□ -0.26
TRAF3-201ENST00000347662 KIF18AQ8NI77 898 aa13.44□□□□□ -0.26
TRAF3-201ENST00000347662 CCDC194A0A1B0GVG4 234 aa13.44□□□□□ -0.26
TRAF3-201ENST00000347662 KRT13P13646 458 aa13.44□□□□□ -0.26
TRAF3-201ENST00000347662 CCDC50Q8IVM0 306 aa13.44□□□□□ -0.26
TRAF3-201ENST00000347662 ATXN8OSP0DMR3 200 aa13.44□□□□□ -0.26
TRAF3-201ENST00000347662 ZNF518AQ6AHZ1 1483 aa13.44□□□□□ -0.26
TRAF3-201ENST00000347662 FANCIQ9NVI1 1328 aa13.44□□□□□ -0.26
TRAF3-201ENST00000347662 KMT5BQ4FZB7 885 aa13.44□□□□□ -0.26
TRAF3-201ENST00000347662 NIP7Q9Y221 180 aaKnown RBP eCLIP13.44□□□□□ -0.26
TRAF3-201ENST00000347662 TACC3Q9Y6A5 838 aa13.44□□□□□ -0.26
TRAF3-201ENST00000347662 SSRP1Q08945 709 aaKnown RBP13.44□□□□□ -0.26
TRAF3-201ENST00000347662 DDX17Q92841 729 aaKnown RBP13.44□□□□□ -0.26
TRAF3-201ENST00000347662 GLRX3O76003 335 aaKnown RBP13.43□□□□□ -0.26
TRAF3-201ENST00000347662 MSL1Q68DK7 614 aa13.43□□□□□ -0.26
TRAF3-201ENST00000347662 NFATC2IPQ8NCF5 419 aa13.43□□□□□ -0.26
TRAF3-201ENST00000347662 NSRP1Q9H0G5 558 aaKnown RBP13.43□□□□□ -0.26
TRAF3-201ENST00000347662 TTC12Q9H892 705 aaPredicted RBP13.43□□□□□ -0.26
TRAF3-201ENST00000347662 ZMYM3Q14202 1370 aa13.43□□□□□ -0.26
TRAF3-201ENST00000347662 PPIP5K1Q6PFW1 1433 aa13.43□□□□□ -0.26
TRAF3-201ENST00000347662 ANKRD13DQ6ZTN6 518 aa13.43□□□□□ -0.26
TRAF3-201ENST00000347662 CGNQ9P2M7 1197 aaKnown RBP13.43□□□□□ -0.26
TRAF3-201ENST00000347662 AKNAD1Q5T1N1 836 aa13.43□□□□□ -0.26
TRAF3-201ENST00000347662 RBM26Q5T8P6 1007 aaKnown RBP13.43□□□□□ -0.26
TRAF3-201ENST00000347662 CNNM3Q8NE01 707 aa13.43□□□□□ -0.26
TRAF3-201ENST00000347662 SEPT8Q92599 483 aa13.43□□□□□ -0.26
TRAF3-201ENST00000347662 PDE1CQ14123 709 aaPredicted RBP13.43□□□□□ -0.26
TRAF3-201ENST00000347662 IQCA1Q86XH1 822 aa13.43□□□□□ -0.26
TRAF3-201ENST00000347662 WDR66Q8TBY9 1149 aa13.43□□□□□ -0.26
TRAF3-201ENST00000347662 SCAF11Q99590 1463 aaKnown RBP13.43□□□□□ -0.26
TRAF3-201ENST00000347662 MIPOL1Q8TD10 442 aa13.43□□□□□ -0.26
TRAF3-201ENST00000347662 PLCB3Q01970 1234 aa13.42□□□□□ -0.26
TRAF3-201ENST00000347662 NOC2LQ9Y3T9 749 aaKnown RBP13.42□□□□□ -0.26
TRAF3-201ENST00000347662 U3KPZ7 1027 aaPredicted RBP13.42□□□□□ -0.26
TRAF3-201ENST00000347662 TRAPPC8Q9Y2L5 1435 aa13.42□□□□□ -0.26
TRAF3-201ENST00000347662 IL2RBP14784 551 aa13.42□□□□□ -0.26
TRAF3-201ENST00000347662 ISM2Q6H9L7 571 aa13.42□□□□□ -0.26
TRAF3-201ENST00000347662 BRPF3Q9ULD4 1205 aa13.42□□□□□ -0.26
TRAF3-201ENST00000347662 SLC12A7Q9Y666 1083 aa13.42□□□□□ -0.26
TRAF3-201ENST00000347662 GOLIM4O00461 696 aa13.42□□□□□ -0.26
TRAF3-201ENST00000347662 AMPD3Q01432 767 aa13.42□□□□□ -0.26
TRAF3-201ENST00000347662 TSPOAP1O95153 1857 aa13.42□□□□□ -0.26
TRAF3-201ENST00000347662 SELENOSQ9BQE4 189 aa13.42□□□□□ -0.26
TRAF3-201ENST00000347662 PLVAPQ9BX97 442 aa13.42□□□□□ -0.26
TRAF3-201ENST00000347662 CHPF2Q9P2E5 772 aa13.42□□□□□ -0.26
TRAF3-201ENST00000347662 SMIM23A6NLE4 172 aa13.42□□□□□ -0.26
TRAF3-201ENST00000347662 MX1P20591 662 aa13.42□□□□□ -0.26
TRAF3-201ENST00000347662 PSMD6Q15008 389 aa13.42□□□□□ -0.26
TRAF3-201ENST00000347662 NBPF14Q5TI25 921 aa13.42□□□□□ -0.26
TRAF3-201ENST00000347662 COPS6Q7L5N1 327 aa13.42□□□□□ -0.26
TRAF3-201ENST00000347662 PHAXQ9H814 394 aaKnown RBP13.42□□□□□ -0.26
TRAF3-201ENST00000347662 CABP5Q9NP86 173 aa13.42□□□□□ -0.26
TRAF3-201ENST00000347662 IFI16Q16666 785 aaKnown RBP13.41□□□□□ -0.26
TRAF3-201ENST00000347662 SLF2Q8IX21 1173 aa13.41□□□□□ -0.26
TRAF3-201ENST00000347662 MAK16Q9BXY0 300 aaKnown RBP13.41□□□□□ -0.26
TRAF3-201ENST00000347662 KRT32Q14532 448 aa13.41□□□□□ -0.26
TRAF3-201ENST00000347662 XAGE3Q8WTP9 111 aa13.41□□□□□ -0.26
TRAF3-201ENST00000347662 RTCBQ9Y3I0 505 aaKnown RBP13.41□□□□□ -0.26
TRAF3-201ENST00000347662 GOLGA6L9A6NEM1 432 aa13.41□□□□□ -0.26
TRAF3-201ENST00000347662 NLRP3Q96P20 1036 aa13.41□□□□□ -0.26
TRAF3-201ENST00000347662 ZSWIM4Q9H7M6 989 aa13.41□□□□□ -0.26
TRAF3-201ENST00000347662 TCP11L1Q9NUJ3 509 aa13.41□□□□□ -0.26
TRAF3-201ENST00000347662 POLD1P28340 1107 aa13.41□□□□□ -0.26
TRAF3-201ENST00000347662 RARSP54136 660 aaKnown RBP13.41□□□□□ -0.26
TRAF3-201ENST00000347662 GCP02774 474 aa13.41□□□□□ -0.26
TRAF3-201ENST00000347662 ATP6V1E1P36543 226 aa13.41□□□□□ -0.26
TRAF3-201ENST00000347662 CATIPQ7Z7H3 387 aa13.41□□□□□ -0.26
TRAF3-201ENST00000347662 NOP9Q86U38 636 aaKnown RBP13.41□□□□□ -0.26
TRAF3-201ENST00000347662 TRIM7Q9C029 511 aa13.41□□□□□ -0.26
TRAF3-201ENST00000347662 DISP3Q9P2K9 1392 aa13.41□□□□□ -0.26
TRAF3-201ENST00000347662 CCDC196A0A1B0GTZ2 297 aa13.4□□□□□ -0.26
TRAF3-201ENST00000347662 K7ELQ4 463 aaPredicted RBP13.4□□□□□ -0.26
TRAF3-201ENST00000347662 TBCAO75347 108 aaKnown RBP13.4□□□□□ -0.26
TRAF3-201ENST00000347662 IRX5P78411 483 aaPredicted RBP13.4□□□□□ -0.26
TRAF3-201ENST00000347662 VPS52Q8N1B4 723 aa13.4□□□□□ -0.26
TRAF3-201ENST00000347662 GRPEL1Q9HAV7 217 aa13.4□□□□□ -0.26
TRAF3-201ENST00000347662 RASAL2Q9UJF2 1139 aa13.4□□□□□ -0.26
TRAF3-201ENST00000347662 PRPF40BQ6NWY9 871 aaKnown RBP13.4□□□□□ -0.26
TRAF3-201ENST00000347662 KIAA1524Q8TCG1 905 aa13.4□□□□□ -0.26
TRAF3-201ENST00000347662 AFG3L2Q9Y4W6 797 aa13.4□□□□□ -0.26
TRAF3-201ENST00000347662 ZNF213O14771 459 aa13.4□□□□□ -0.26
TRAF3-201ENST00000347662 RAB11FIP3O75154 756 aa13.4□□□□□ -0.26
TRAF3-201ENST00000347662 CCDC152Q4G0S7 254 aa13.4□□□□□ -0.26
TRAF3-201ENST00000347662 CCDC170Q8IYT3 715 aa13.4□□□□□ -0.26
TRAF3-201ENST00000347662 C8orf76Q96K31 380 aa13.4□□□□□ -0.26
TRAF3-201ENST00000347662 ANO10Q9NW15 660 aa13.4□□□□□ -0.26
TRAF3-201ENST00000347662 TSHZ3Q63HK5 1081 aa13.4□□□□□ -0.27
TRAF3-201ENST00000347662 ANKS4BQ8N8V4 417 aa13.39□□□□□ -0.27
TRAF3-201ENST00000347662 ORAI2Q96SN7 254 aa13.39□□□□□ -0.27
TRAF3-201ENST00000347662 SYCE3A1L190 88 aa13.39□□□□□ -0.27
TRAF3-201ENST00000347662 PPP4R4Q6NUP7 873 aa13.39□□□□□ -0.27
TRAF3-201ENST00000347662 OGFOD1Q8N543 542 aa13.39□□□□□ -0.27
TRAF3-201ENST00000347662 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.39□□□□□ -0.27
TRAF3-201ENST00000347662 MBIPQ9NS73 344 aa13.39□□□□□ -0.27
TRAF3-201ENST00000347662 DIXDC1Q155Q3 683 aa13.39□□□□□ -0.27
TRAF3-201ENST00000347662 FERMT3Q86UX7 667 aa13.39□□□□□ -0.27
TRAF3-201ENST00000347662 LARP6Q9BRS8 491 aaKnown RBP13.39□□□□□ -0.27
TRAF3-201ENST00000347662 CALCOCO1Q9P1Z2 691 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms