RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 ZDHHC9Q9Y397 364 aa16.94■□□□□ 0.3
CDK5RAP1-202ENST00000346416 RIC1Q4ADV7 1423 aa16.94■□□□□ 0.3
CDK5RAP1-202ENST00000346416 SH3TC1Q8TE82 1336 aa16.93■□□□□ 0.3
CDK5RAP1-202ENST00000346416 VPS53Q5VIR6 699 aa16.93■□□□□ 0.3
CDK5RAP1-202ENST00000346416 CCDC129Q6ZRS4 1044 aa16.93■□□□□ 0.3
CDK5RAP1-202ENST00000346416 CNNM1Q9NRU3 951 aa16.93■□□□□ 0.3
CDK5RAP1-202ENST00000346416 PDRG1Q9NUG6 133 aa16.93■□□□□ 0.3
CDK5RAP1-202ENST00000346416 SPATA31A6Q5VVP1 1343 aa16.93■□□□□ 0.3
CDK5RAP1-202ENST00000346416 FAM177BA6PVY3 158 aa16.93■□□□□ 0.3
CDK5RAP1-202ENST00000346416 TICAM2Q86XR7 235 aa16.93■□□□□ 0.3
CDK5RAP1-202ENST00000346416 AK7Q96M32 723 aa16.93■□□□□ 0.3
CDK5RAP1-202ENST00000346416 LARP6Q9BRS8 491 aaKnown RBP16.93■□□□□ 0.3
CDK5RAP1-202ENST00000346416 UTP14AQ9BVJ6 771 aaKnown RBP16.93■□□□□ 0.3
CDK5RAP1-202ENST00000346416 HCLS1P14317 486 aaPredicted RBP16.92■□□□□ 0.3
CDK5RAP1-202ENST00000346416 ATP2B3Q16720 1220 aa16.92■□□□□ 0.3
CDK5RAP1-202ENST00000346416 TTC39AQ5SRH9 613 aa16.92■□□□□ 0.3
CDK5RAP1-202ENST00000346416 USPL1Q5W0Q7 1092 aa16.92■□□□□ 0.3
CDK5RAP1-202ENST00000346416 RPAP1Q9BWH6 1393 aaPredicted RBP16.92■□□□□ 0.3
CDK5RAP1-202ENST00000346416 COL5A3P25940 1745 aaPredicted RBP16.91■□□□□ 0.3
CDK5RAP1-202ENST00000346416 GOLGA6L22H0YM25 854 aa16.91■□□□□ 0.3
CDK5RAP1-202ENST00000346416 FKBP4Q02790 459 aaKnown RBP eCLIP16.91■□□□□ 0.3
CDK5RAP1-202ENST00000346416 SLFNL1Q499Z3 407 aa16.91■□□□□ 0.3
CDK5RAP1-202ENST00000346416 PARP10Q53GL7 1025 aa16.91■□□□□ 0.3
CDK5RAP1-202ENST00000346416 HMG20BQ9P0W2 317 aa16.91■□□□□ 0.3
CDK5RAP1-202ENST00000346416 NIP7Q9Y221 180 aaKnown RBP eCLIP16.91■□□□□ 0.3
CDK5RAP1-202ENST00000346416 TAF6LQ9Y6J9 622 aa16.91■□□□□ 0.3
CDK5RAP1-202ENST00000346416 SPEF2Q9C093 1822 aa16.91■□□□□ 0.3
CDK5RAP1-202ENST00000346416 PTMSP20962 102 aa16.91■□□□□ 0.3
CDK5RAP1-202ENST00000346416 PSMA5P28066 241 aa16.91■□□□□ 0.3
CDK5RAP1-202ENST00000346416 PTF1AQ7RTS3 328 aa16.91■□□□□ 0.3
CDK5RAP1-202ENST00000346416 LINC00116Q8NCU8 138 aa16.91■□□□□ 0.3
CDK5RAP1-202ENST00000346416 GZF1Q9H116 711 aaPredicted RBP16.91■□□□□ 0.3
CDK5RAP1-202ENST00000346416 KCNQ4P56696 695 aa16.9■□□□□ 0.3
CDK5RAP1-202ENST00000346416 TSGA10IPQ3SY00 556 aa16.9■□□□□ 0.3
CDK5RAP1-202ENST00000346416 VGLL2Q8N8G2 317 aa16.9■□□□□ 0.3
CDK5RAP1-202ENST00000346416 HELLSQ9NRZ9 838 aa16.9■□□□□ 0.3
CDK5RAP1-202ENST00000346416 ZNF831Q5JPB2 1677 aa16.9■□□□□ 0.3
CDK5RAP1-202ENST00000346416 COL9A3Q14050 684 aaPredicted RBP16.9■□□□□ 0.3
CDK5RAP1-202ENST00000346416 ZMYM1Q5SVZ6 1142 aa16.9■□□□□ 0.3
CDK5RAP1-202ENST00000346416 PDE8BO95263 885 aa16.89■□□□□ 0.29
CDK5RAP1-202ENST00000346416 SCARF1Q14162 830 aa16.89■□□□□ 0.29
CDK5RAP1-202ENST00000346416 U3KPZ7 1027 aaPredicted RBP16.89■□□□□ 0.29
CDK5RAP1-202ENST00000346416 RNF113AO15541 343 aaKnown RBP16.88■□□□□ 0.29
CDK5RAP1-202ENST00000346416 LARGE1O95461 756 aa16.88■□□□□ 0.29
CDK5RAP1-202ENST00000346416 NTSR2O95665 410 aa16.88■□□□□ 0.29
CDK5RAP1-202ENST00000346416 BRD1O95696 1058 aa16.88■□□□□ 0.29
CDK5RAP1-202ENST00000346416 SKOR2Q2VWA4 1001 aaPredicted RBP16.88■□□□□ 0.29
CDK5RAP1-202ENST00000346416 MCTP1Q6DN14 999 aa16.88■□□□□ 0.29
CDK5RAP1-202ENST00000346416 BLOC1S2Q6QNY1 142 aa16.88■□□□□ 0.29
CDK5RAP1-202ENST00000346416 ZNF652Q9Y2D9 606 aa16.88■□□□□ 0.29
CDK5RAP1-202ENST00000346416 ABCC12Q96J65 1359 aa16.87■□□□□ 0.29
CDK5RAP1-202ENST00000346416 FOXD4L5Q5VV16 416 aaPredicted RBP16.87■□□□□ 0.29
CDK5RAP1-202ENST00000346416 FOXD4L4Q8WXT5 416 aaPredicted RBP16.87■□□□□ 0.29
CDK5RAP1-202ENST00000346416 ZSCAN31Q96LW9 406 aaPredicted RBP16.87■□□□□ 0.29
CDK5RAP1-202ENST00000346416 RPS6KB1P23443 525 aa16.87■□□□□ 0.29
CDK5RAP1-202ENST00000346416 ZAP70P43403 619 aa16.87■□□□□ 0.29
CDK5RAP1-202ENST00000346416 KRT32Q14532 448 aa16.87■□□□□ 0.29
CDK5RAP1-202ENST00000346416 FAM182BQ5T319 152 aa16.87■□□□□ 0.29
CDK5RAP1-202ENST00000346416 CLEC4GQ6UXB4 293 aa16.87■□□□□ 0.29
CDK5RAP1-202ENST00000346416 PI16Q6UXB8 463 aa16.87■□□□□ 0.29
CDK5RAP1-202ENST00000346416 SH2B1Q9NRF2 756 aaPredicted RBP16.87■□□□□ 0.29
CDK5RAP1-202ENST00000346416 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.87■□□□□ 0.29
CDK5RAP1-202ENST00000346416 MAST3O60307 1309 aa16.86■□□□□ 0.29
CDK5RAP1-202ENST00000346416 THSD7AQ9UPZ6 1657 aa16.86■□□□□ 0.29
CDK5RAP1-202ENST00000346416 CYP21A2P08686 494 aa16.86■□□□□ 0.29
CDK5RAP1-202ENST00000346416 LRRFIP1Q32MZ4 808 aaKnown RBP16.86■□□□□ 0.29
CDK5RAP1-202ENST00000346416 SEC31BQ9NQW1 1179 aa16.86■□□□□ 0.29
CDK5RAP1-202ENST00000346416 MROH5Q6ZUA9 1318 aa16.86■□□□□ 0.29
CDK5RAP1-202ENST00000346416 LRP5O75197 1615 aa16.86■□□□□ 0.29
CDK5RAP1-202ENST00000346416 DDX60Q8IY21 1712 aaKnown RBP16.86■□□□□ 0.29
CDK5RAP1-202ENST00000346416 HSP90B1P14625 803 aaKnown RBP16.85■□□□□ 0.29
CDK5RAP1-202ENST00000346416 MCAMP43121 646 aa16.85■□□□□ 0.29
CDK5RAP1-202ENST00000346416 CCDC152Q4G0S7 254 aa16.85■□□□□ 0.29
CDK5RAP1-202ENST00000346416 MEX3CQ5U5Q3 659 aaKnown RBP16.85■□□□□ 0.29
CDK5RAP1-202ENST00000346416 HELBQ8NG08 1087 aaPredicted RBP16.85■□□□□ 0.29
CDK5RAP1-202ENST00000346416 TCEANC2Q96MN5 208 aa16.85■□□□□ 0.29
CDK5RAP1-202ENST00000346416 MPHOSPH8Q99549 860 aa16.85■□□□□ 0.29
CDK5RAP1-202ENST00000346416 DSCC1Q9BVC3 393 aa16.85■□□□□ 0.29
CDK5RAP1-202ENST00000346416 CNTNAP4Q9C0A0 1308 aa16.85■□□□□ 0.29
CDK5RAP1-202ENST00000346416 BCORQ6W2J9 1755 aa16.85■□□□□ 0.29
CDK5RAP1-202ENST00000346416 PUM3Q15397 648 aaKnown RBP16.85■□□□□ 0.29
CDK5RAP1-202ENST00000346416 ME3Q16798 604 aa16.85■□□□□ 0.29
CDK5RAP1-202ENST00000346416 CCDC83Q8IWF9 413 aa16.85■□□□□ 0.29
CDK5RAP1-202ENST00000346416 CERKQ8TCT0 537 aa16.85■□□□□ 0.29
CDK5RAP1-202ENST00000346416 OSBP2Q969R2 916 aa16.85■□□□□ 0.29
CDK5RAP1-202ENST00000346416 ZNF512BQ96KM6 892 aaPredicted RBP16.85■□□□□ 0.29
CDK5RAP1-202ENST00000346416 TPCN1Q9ULQ1 816 aa16.85■□□□□ 0.29
CDK5RAP1-202ENST00000346416 BTAF1O14981 1849 aa16.84■□□□□ 0.29
CDK5RAP1-202ENST00000346416 ZFYP08048 801 aaPredicted RBP16.84■□□□□ 0.29
CDK5RAP1-202ENST00000346416 HSPD1P10809 573 aaKnown RBP16.84■□□□□ 0.29
CDK5RAP1-202ENST00000346416 GJD4Q96KN9 370 aaPredicted RBP16.84■□□□□ 0.29
CDK5RAP1-202ENST00000346416 ALDH8A1Q9H2A2 487 aaPredicted RBP16.84■□□□□ 0.29
CDK5RAP1-202ENST00000346416 AKAP11Q9UKA4 1901 aa16.84■□□□□ 0.29
CDK5RAP1-202ENST00000346416 M0R2C6 588 aa16.84■□□□□ 0.29
CDK5RAP1-202ENST00000346416 ANKRD1Q15327 319 aa16.84■□□□□ 0.29
CDK5RAP1-202ENST00000346416 LPIN2Q92539 896 aa16.84■□□□□ 0.29
CDK5RAP1-202ENST00000346416 CHAMP1Q96JM3 812 aa16.84■□□□□ 0.29
CDK5RAP1-202ENST00000346416 NEK1Q96PY6 1258 aa16.84■□□□□ 0.29
CDK5RAP1-202ENST00000346416 SMC3Q9UQE7 1217 aa16.84■□□□□ 0.29
CDK5RAP1-202ENST00000346416 FGFR2P21802 821 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms