RNA–Protein interactions for RNA: ENST00000345057.8

TRADD-201, Transcript of TNFRSF1A associated via death domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRADD, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-201ENST00000345057 XAGE2Q96GT9 111 aa30.46■■■□□ 2.47
TRADD-201ENST00000345057 PAG1Q9NWQ8 432 aa30.46■■■□□ 2.47
TRADD-201ENST00000345057 LRRFIP1Q32MZ4 808 aaKnown RBP30.45■■■□□ 2.47
TRADD-201ENST00000345057 TTC39AQ5SRH9 613 aa30.45■■■□□ 2.47
TRADD-201ENST00000345057 MPHOSPH8Q99549 860 aa30.45■■■□□ 2.47
TRADD-201ENST00000345057 HSP90AA1P07900 732 aaKnown RBP30.44■■■□□ 2.46
TRADD-201ENST00000345057 ADRA2BP18089 450 aa30.44■■■□□ 2.46
TRADD-201ENST00000345057 USPL1Q5W0Q7 1092 aa30.44■■■□□ 2.46
TRADD-201ENST00000345057 PDE8BO95263 885 aa30.44■■■□□ 2.46
TRADD-201ENST00000345057 SETDB2Q96T68 719 aa30.44■■■□□ 2.46
TRADD-201ENST00000345057 CCDC171Q6TFL3 1326 aa30.43■■■□□ 2.46
TRADD-201ENST00000345057 IGHMBP2P38935 993 aaKnown RBP30.43■■■□□ 2.46
TRADD-201ENST00000345057 CD2BP2O95400 341 aaKnown RBP30.42■■■□□ 2.46
TRADD-201ENST00000345057 TRAPPC3LQ5T215 181 aa30.42■■■□□ 2.46
TRADD-201ENST00000345057 VGLL2Q8N8G2 317 aa30.42■■■□□ 2.46
TRADD-201ENST00000345057 FAM227BQ96M60 508 aa30.42■■■□□ 2.46
TRADD-201ENST00000345057 CDC5LQ99459 802 aaKnown RBP30.42■■■□□ 2.46
TRADD-201ENST00000345057 BCL2L12Q9HB09 334 aa30.42■■■□□ 2.46
TRADD-201ENST00000345057 BRWD3Q6RI45 1802 aa30.42■■■□□ 2.46
TRADD-201ENST00000345057 MED23Q9ULK4 1368 aa30.42■■■□□ 2.46
TRADD-201ENST00000345057 GTF2E1P29083 439 aaPredicted RBP30.42■■■□□ 2.46
TRADD-201ENST00000345057 CHMP5Q9NZZ3 219 aa30.42■■■□□ 2.46
TRADD-201ENST00000345057 RFC4P35249 363 aa30.41■■■□□ 2.46
TRADD-201ENST00000345057 SLC10A5Q5PT55 438 aa30.41■■■□□ 2.46
TRADD-201ENST00000345057 TBC1D9BQ66K14 1250 aa30.41■■■□□ 2.46
TRADD-201ENST00000345057 ARHGEF1Q92888 912 aaKnown RBP30.41■■■□□ 2.46
TRADD-201ENST00000345057 ZNF512BQ96KM6 892 aaPredicted RBP30.41■■■□□ 2.46
TRADD-201ENST00000345057 PALD1Q9ULE6 856 aa30.41■■■□□ 2.46
TRADD-201ENST00000345057 SF3B3Q15393 1217 aaKnown RBP30.4■■■□□ 2.46
TRADD-201ENST00000345057 PUM3Q15397 648 aaKnown RBP30.4■■■□□ 2.46
TRADD-201ENST00000345057 COL24A1Q17RW2 1714 aa30.4■■■□□ 2.46
TRADD-201ENST00000345057 NEK4P51957 841 aa30.4■■■□□ 2.46
TRADD-201ENST00000345057 DDX46Q7L014 1031 aaKnown RBP30.4■■■□□ 2.46
TRADD-201ENST00000345057 EDC3Q96F86 508 aaKnown RBP30.4■■■□□ 2.46
TRADD-201ENST00000345057 A0A0D9SFI3 127 aa30.39■■■□□ 2.46
TRADD-201ENST00000345057 GOLIM4O00461 696 aa30.39■■■□□ 2.46
TRADD-201ENST00000345057 LPIN2Q92539 896 aa30.39■■■□□ 2.46
TRADD-201ENST00000345057 CIZ1Q9ULV3 898 aaPredicted RBP30.39■■■□□ 2.46
TRADD-201ENST00000345057 ERFEQ4G0M1 354 aa30.38■■■□□ 2.45
TRADD-201ENST00000345057 SPRYD3Q8NCJ5 442 aa30.38■■■□□ 2.45
TRADD-201ENST00000345057 NBR1Q14596 966 aa30.38■■■□□ 2.45
TRADD-201ENST00000345057 TPTE2Q6XPS3 522 aa30.38■■■□□ 2.45
TRADD-201ENST00000345057 MAP4K1Q92918 833 aa30.38■■■□□ 2.45
TRADD-201ENST00000345057 ADORA1P30542 326 aa30.37■■■□□ 2.45
TRADD-201ENST00000345057 BICDL1Q6ZP65 573 aa30.37■■■□□ 2.45
TRADD-201ENST00000345057 SRP68Q9UHB9 627 aaKnown RBP30.37■■■□□ 2.45
TRADD-201ENST00000345057 ZKSCAN1P17029 563 aaPredicted RBP30.36■■■□□ 2.45
TRADD-201ENST00000345057 KCNJ4P48050 445 aa30.36■■■□□ 2.45
TRADD-201ENST00000345057 MCMDC2Q4G0Z9 681 aa30.36■■■□□ 2.45
TRADD-201ENST00000345057 RNF20Q5VTR2 975 aa30.36■■■□□ 2.45
TRADD-201ENST00000345057 NBPF5PQ86XG9 351 aaPredicted RBP30.36■■■□□ 2.45
TRADD-201ENST00000345057 HELLSQ9NRZ9 838 aa30.36■■■□□ 2.45
TRADD-201ENST00000345057 SNX14Q9Y5W7 946 aa30.36■■■□□ 2.45
TRADD-201ENST00000345057 KCNB2Q92953 911 aa30.36■■■□□ 2.45
TRADD-201ENST00000345057 SEC31BQ9NQW1 1179 aa30.36■■■□□ 2.45
TRADD-201ENST00000345057 SLC5A1P13866 664 aa30.35■■■□□ 2.45
TRADD-201ENST00000345057 PTH1RQ03431 593 aa30.35■■■□□ 2.45
TRADD-201ENST00000345057 LRRC4BQ9NT99 713 aa30.35■■■□□ 2.45
TRADD-201ENST00000345057 C4AP0C0L4 1744 aa30.35■■■□□ 2.45
TRADD-201ENST00000345057 UQCRFS1P1P0C7P4 283 aa30.34■■■□□ 2.45
TRADD-201ENST00000345057 NDUFB9Q9Y6M9 179 aa30.34■■■□□ 2.45
TRADD-201ENST00000345057 TRIM37O94972 964 aa30.33■■■□□ 2.45
TRADD-201ENST00000345057 ZFYP08048 801 aaPredicted RBP30.33■■■□□ 2.45
TRADD-201ENST00000345057 FGFR2P21802 821 aa30.33■■■□□ 2.45
TRADD-201ENST00000345057 NECTIN1Q15223 517 aa30.33■■■□□ 2.45
TRADD-201ENST00000345057 ARAP2Q8WZ64 1704 aa30.33■■■□□ 2.45
TRADD-201ENST00000345057 SSFA2P28290 1259 aa30.33■■■□□ 2.45
TRADD-201ENST00000345057 RBM8AQ9Y5S9 174 aaKnown RBP30.33■■■□□ 2.45
TRADD-201ENST00000345057 FKBP4Q02790 459 aaKnown RBP eCLIP30.32■■■□□ 2.44
TRADD-201ENST00000345057 NFKBIBQ15653 356 aa30.32■■■□□ 2.44
TRADD-201ENST00000345057 ANKRD18AQ8IVF6 992 aa30.32■■■□□ 2.44
TRADD-201ENST00000345057 NLRP3Q96P20 1036 aa30.32■■■□□ 2.44
TRADD-201ENST00000345057 HMG20BQ9P0W2 317 aa30.32■■■□□ 2.44
TRADD-201ENST00000345057 DDIT3P35638 169 aa30.31■■■□□ 2.44
TRADD-201ENST00000345057 TTF1Q15361 905 aaPredicted RBP30.31■■■□□ 2.44
TRADD-201ENST00000345057 TM6SF1Q9BZW5 370 aa30.31■■■□□ 2.44
TRADD-201ENST00000345057 CARMIL3Q8ND23 1372 aa30.31■■■□□ 2.44
TRADD-201ENST00000345057 RNF113AO15541 343 aaKnown RBP30.31■■■□□ 2.44
TRADD-201ENST00000345057 PHF14O94880 888 aa30.31■■■□□ 2.44
TRADD-201ENST00000345057 TAF5LO75529 589 aa30.3■■■□□ 2.44
TRADD-201ENST00000345057 PRPF40BQ6NWY9 871 aaKnown RBP30.3■■■□□ 2.44
TRADD-201ENST00000345057 SMIM5Q71RC9 77 aa30.29■■■□□ 2.44
TRADD-201ENST00000345057 ARID4AP29374 1257 aaPredicted RBP30.29■■■□□ 2.44
TRADD-201ENST00000345057 ZMYM1Q5SVZ6 1142 aa30.29■■■□□ 2.44
TRADD-201ENST00000345057 ZNF589Q86UQ0 364 aaPredicted RBP30.29■■■□□ 2.44
TRADD-201ENST00000345057 DDX24Q9GZR7 859 aaKnown RBP eCLIP30.29■■■□□ 2.44
TRADD-201ENST00000345057 CWC22Q9HCG8 908 aaKnown RBP30.29■■■□□ 2.44
TRADD-201ENST00000345057 CREB3L3Q68CJ9 461 aa30.28■■■□□ 2.44
TRADD-201ENST00000345057 ZSCAN25Q6NSZ9 544 aa30.28■■■□□ 2.44
TRADD-201ENST00000345057 AMIGO3Q86WK7 504 aa30.28■■■□□ 2.44
TRADD-201ENST00000345057 BSDC1Q9NW68 430 aaPredicted RBP30.28■■■□□ 2.44
TRADD-201ENST00000345057 U3KPZ7 1027 aaPredicted RBP30.28■■■□□ 2.44
TRADD-201ENST00000345057 UBR3Q6ZT12 1888 aa30.28■■■□□ 2.44
TRADD-201ENST00000345057 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.27■■■□□ 2.44
TRADD-201ENST00000345057 PSMA5P28066 241 aa30.27■■■□□ 2.44
TRADD-201ENST00000345057 CCDC102BQ68D86 513 aa30.27■■■□□ 2.44
TRADD-201ENST00000345057 RASEFQ8IZ41 740 aa30.27■■■□□ 2.44
TRADD-201ENST00000345057 NPHP1O15259 732 aa30.26■■■□□ 2.43
TRADD-201ENST00000345057 UPF3BQ9BZI7 483 aaKnown RBP30.26■■■□□ 2.43
TRADD-201ENST00000345057 ZAP70P43403 619 aa30.25■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms