RNA–Protein interactions for RNA: ENST00000343805.10

SP140-201, Transcript of SP140 nuclear body protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP140, Length 2,910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-201ENST00000343805 DDX41Q9UJV9 622 aaKnown RBP10.3□□□□□ -0.76
SP140-201ENST00000343805 USTQ9Y2C2 406 aa10.3□□□□□ -0.76
SP140-201ENST00000343805 RPS6KL1Q9Y6S9 549 aa10.3□□□□□ -0.76
SP140-201ENST00000343805 LGR5O75473 907 aa10.3□□□□□ -0.76
SP140-201ENST00000343805 SURF6O75683 361 aaKnown RBP10.3□□□□□ -0.76
SP140-201ENST00000343805 NUCB2P80303 420 aa10.3□□□□□ -0.76
SP140-201ENST00000343805 TMEM164Q5U3C3 297 aa10.3□□□□□ -0.76
SP140-201ENST00000343805 PRR7Q8TB68 274 aa10.3□□□□□ -0.76
SP140-201ENST00000343805 RIMS1Q86UR5 1692 aaKnown RBP10.29□□□□□ -0.76
SP140-201ENST00000343805 CRB1P82279 1406 aa10.29□□□□□ -0.76
SP140-201ENST00000343805 RNF214Q8ND24 703 aa10.29□□□□□ -0.76
SP140-201ENST00000343805 NRXN3Q9Y4C0 1643 aa10.29□□□□□ -0.76
SP140-201ENST00000343805 SPATA31D1Q6ZQQ2 1576 aa10.29□□□□□ -0.76
SP140-201ENST00000343805 UBTFL1P0CB47 393 aaPredicted RBP10.29□□□□□ -0.76
SP140-201ENST00000343805 C1QTNF12Q5T7M4 302 aa10.29□□□□□ -0.76
SP140-201ENST00000343805 TBC1D22AQ8WUA7 517 aa10.29□□□□□ -0.76
SP140-201ENST00000343805 VTI1AQ96AJ9 217 aa10.29□□□□□ -0.76
SP140-201ENST00000343805 TMX3Q96JJ7 454 aa10.29□□□□□ -0.76
SP140-201ENST00000343805 GJD4Q96KN9 370 aaPredicted RBP10.29□□□□□ -0.76
SP140-201ENST00000343805 NSFL1CQ9UNZ2 370 aaKnown RBP10.29□□□□□ -0.76
SP140-201ENST00000343805 KIAA0232Q92628 1395 aa10.29□□□□□ -0.76
SP140-201ENST00000343805 IPO7O95373 1038 aaKnown RBP10.28□□□□□ -0.76
SP140-201ENST00000343805 KCNA6P17658 529 aa10.28□□□□□ -0.76
SP140-201ENST00000343805 EXOC8Q8IYI6 725 aa10.28□□□□□ -0.76
SP140-201ENST00000343805 DDX54Q8TDD1 881 aaKnown RBP10.28□□□□□ -0.76
SP140-201ENST00000343805 CABLES1Q8TDN4 633 aa10.28□□□□□ -0.76
SP140-201ENST00000343805 IL25Q9H293 177 aa10.28□□□□□ -0.76
SP140-201ENST00000343805 ADAMTS13Q76LX8 1427 aa10.28□□□□□ -0.76
SP140-201ENST00000343805 FLT4P35916 1363 aa10.28□□□□□ -0.76
SP140-201ENST00000343805 CCDC196A0A1B0GTZ2 297 aa10.28□□□□□ -0.76
SP140-201ENST00000343805 KCNQ3O43525 872 aa10.28□□□□□ -0.76
SP140-201ENST00000343805 NEFHP12036 1026 aa10.28□□□□□ -0.76
SP140-201ENST00000343805 KLHL40Q2TBA0 621 aa10.28□□□□□ -0.76
SP140-201ENST00000343805 UVSSAQ2YD98 709 aa10.28□□□□□ -0.76
SP140-201ENST00000343805 PLPP6Q8IY26 295 aa10.28□□□□□ -0.76
SP140-201ENST00000343805 NOL10Q9BSC4 688 aaKnown RBP10.28□□□□□ -0.76
SP140-201ENST00000343805 LGR6Q9HBX8 967 aa10.28□□□□□ -0.76
SP140-201ENST00000343805 LMBRD1Q9NUN5 540 aa10.28□□□□□ -0.76
SP140-201ENST00000343805 ZDHHC9Q9Y397 364 aa10.28□□□□□ -0.76
SP140-201ENST00000343805 JRKLQ9Y4A0 524 aa10.28□□□□□ -0.76
SP140-201ENST00000343805 NDUFV2P19404 249 aa10.27□□□□□ -0.76
SP140-201ENST00000343805 ATP2B1P20020 1258 aa10.27□□□□□ -0.76
SP140-201ENST00000343805 HOXC9P31274 260 aa10.27□□□□□ -0.76
SP140-201ENST00000343805 HNRNPH2P55795 449 aaKnown RBP10.27□□□□□ -0.76
SP140-201ENST00000343805 BIRC2Q13490 618 aa10.27□□□□□ -0.76
SP140-201ENST00000343805 ESYT1Q9BSJ8 1104 aa10.27□□□□□ -0.76
SP140-201ENST00000343805 USP44Q9H0E7 712 aa10.27□□□□□ -0.76
SP140-201ENST00000343805 FAM53CQ9NYF3 392 aa10.27□□□□□ -0.76
SP140-201ENST00000343805 CCDC39Q9UFE4 941 aa10.27□□□□□ -0.76
SP140-201ENST00000343805 OVOS2A0A0J9YW53 1432 aa10.27□□□□□ -0.76
SP140-201ENST00000343805 OVOS2Q6IE36 1432 aa10.27□□□□□ -0.76
SP140-201ENST00000343805 SYCE3A1L190 88 aa10.27□□□□□ -0.77
SP140-201ENST00000343805 SRGAP3O43295 1099 aa10.27□□□□□ -0.77
SP140-201ENST00000343805 CTIFO43310 598 aaKnown RBP10.27□□□□□ -0.77
SP140-201ENST00000343805 GNAI3P08754 354 aa10.27□□□□□ -0.77
SP140-201ENST00000343805 ZSCAN23Q3MJ62 389 aa10.27□□□□□ -0.77
SP140-201ENST00000343805 PPP1R42Q7Z4L9 355 aa10.27□□□□□ -0.77
SP140-201ENST00000343805 CTNNA3Q9UI47 895 aa10.27□□□□□ -0.77
SP140-201ENST00000343805 PTPRUQ92729 1446 aa10.27□□□□□ -0.77
SP140-201ENST00000343805 SETD1AO15047 1707 aaKnown RBP10.27□□□□□ -0.77
SP140-201ENST00000343805 ANKRD62A6NC57 917 aa10.27□□□□□ -0.77
SP140-201ENST00000343805 NBPF7P0C2Y1 421 aaPredicted RBP10.27□□□□□ -0.77
SP140-201ENST00000343805 CYP2C19P33261 490 aa10.27□□□□□ -0.77
SP140-201ENST00000343805 MAP3K9P80192 1104 aa10.27□□□□□ -0.77
SP140-201ENST00000343805 CHAF1AQ13111 956 aaPredicted RBP10.27□□□□□ -0.77
SP140-201ENST00000343805 TAF7Q15545 349 aaPredicted RBP10.27□□□□□ -0.77
SP140-201ENST00000343805 MPRIPQ6WCQ1 1025 aa10.27□□□□□ -0.77
SP140-201ENST00000343805 ARMCX6Q7L4S7 300 aa10.27□□□□□ -0.77
SP140-201ENST00000343805 LRRC59Q96AG4 307 aaKnown RBP10.27□□□□□ -0.77
SP140-201ENST00000343805 GOLGA6L6A8MZA4 724 aa10.26□□□□□ -0.77
SP140-201ENST00000343805 RECKO95980 971 aa10.26□□□□□ -0.77
SP140-201ENST00000343805 CHMLP26374 656 aa10.26□□□□□ -0.77
SP140-201ENST00000343805 ATP8B2P98198 1209 aa10.26□□□□□ -0.77
SP140-201ENST00000343805 TSGA10IPQ3SY00 556 aa10.26□□□□□ -0.77
SP140-201ENST00000343805 GPT2Q8TD30 523 aa10.26□□□□□ -0.77
SP140-201ENST00000343805 KIF24Q5T7B8 1368 aa10.26□□□□□ -0.77
SP140-201ENST00000343805 CEP170BQ9Y4F5 1589 aaPredicted RBP10.26□□□□□ -0.77
SP140-201ENST00000343805 PI4KAP2A4QPH2 592 aa10.26□□□□□ -0.77
SP140-201ENST00000343805 PI4KAP1Q8N8J0 262 aa10.26□□□□□ -0.77
SP140-201ENST00000343805 GPATCH3Q96I76 525 aa10.26□□□□□ -0.77
SP140-201ENST00000343805 SBNO1A3KN83 1393 aa10.25□□□□□ -0.77
SP140-201ENST00000343805 PIK3CDO00329 1044 aa10.25□□□□□ -0.77
SP140-201ENST00000343805 CPA1P15085 419 aa10.25□□□□□ -0.77
SP140-201ENST00000343805 TSNAXIP1Q2TAA8 658 aa10.25□□□□□ -0.77
SP140-201ENST00000343805 MAP9Q49MG5 647 aa10.25□□□□□ -0.77
SP140-201ENST00000343805 DRC1Q96MC2 740 aa10.25□□□□□ -0.77
SP140-201ENST00000343805 RBSNQ9H1K0 784 aa10.25□□□□□ -0.77
SP140-201ENST00000343805 CHPF2Q9P2E5 772 aa10.25□□□□□ -0.77
SP140-201ENST00000343805 SPG7Q9UQ90 795 aa10.25□□□□□ -0.77
SP140-201ENST00000343805 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.25□□□□□ -0.77
SP140-201ENST00000343805 IGSF1Q8N6C5 1336 aa10.25□□□□□ -0.77
SP140-201ENST00000343805 ITSN1Q15811 1721 aa10.25□□□□□ -0.77
SP140-201ENST00000343805 PEAK1Q9H792 1746 aa10.25□□□□□ -0.77
SP140-201ENST00000343805 SPDYE16A6NNV3 312 aaPredicted RBP10.25□□□□□ -0.77
SP140-201ENST00000343805 ATP6V1AP38606 617 aa10.25□□□□□ -0.77
SP140-201ENST00000343805 CWC27Q6UX04 472 aaKnown RBP10.25□□□□□ -0.77
SP140-201ENST00000343805 SUGP1Q8IWZ8 645 aaKnown RBP10.25□□□□□ -0.77
SP140-201ENST00000343805 SREK1Q8WXA9 508 aaKnown RBP10.25□□□□□ -0.77
SP140-201ENST00000343805 C3P01024 1663 aa10.25□□□□□ -0.77
SP140-201ENST00000343805 MYBPC2Q14324 1141 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 186.1 ms