RNA–Protein interactions for RNA: ENST00000341529.7

CDH5-201, Transcript of cadherin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH5, Length 4,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-201ENST00000341529 TRMT1LQ7Z2T5 733 aaKnown RBP13.88□□□□□ -0.19
CDH5-201ENST00000341529 DCAF5Q96JK2 942 aa13.88□□□□□ -0.19
CDH5-201ENST00000341529 NSFL1CQ9UNZ2 370 aaKnown RBP13.88□□□□□ -0.19
CDH5-201ENST00000341529 SYNMO15061 1565 aa13.88□□□□□ -0.19
CDH5-201ENST00000341529 CAVIN4Q5BKX8 364 aa13.88□□□□□ -0.19
CDH5-201ENST00000341529 BEND3Q5T5X7 828 aa13.88□□□□□ -0.19
CDH5-201ENST00000341529 CDC42BPBQ9Y5S2 1711 aa13.88□□□□□ -0.19
CDH5-201ENST00000341529 A0A087WWV3 80 aa13.88□□□□□ -0.19
CDH5-201ENST00000341529 METTL22Q9BUU2 404 aaPredicted RBP13.88□□□□□ -0.19
CDH5-201ENST00000341529 DNA2P51530 1060 aa13.88□□□□□ -0.19
CDH5-201ENST00000341529 SSRP1Q08945 709 aaKnown RBP13.88□□□□□ -0.19
CDH5-201ENST00000341529 MAPK8IP2Q13387 824 aaPredicted RBP13.88□□□□□ -0.19
CDH5-201ENST00000341529 MFSD6Q6ZSS7 791 aa13.88□□□□□ -0.19
CDH5-201ENST00000341529 DNAJC10Q8IXB1 793 aa13.88□□□□□ -0.19
CDH5-201ENST00000341529 TANGO6Q9C0B7 1094 aa13.88□□□□□ -0.19
CDH5-201ENST00000341529 SETD1BQ9UPS6 1966 aaKnown RBP13.87□□□□□ -0.19
CDH5-201ENST00000341529 DHX32Q7L7V1 743 aaKnown RBP13.87□□□□□ -0.19
CDH5-201ENST00000341529 ZBTB43O43298 467 aa13.87□□□□□ -0.19
CDH5-201ENST00000341529 TAF5LO75529 589 aa13.87□□□□□ -0.19
CDH5-201ENST00000341529 TOP1P11387 765 aaKnown RBP13.87□□□□□ -0.19
CDH5-201ENST00000341529 CYP7A1P22680 504 aa13.87□□□□□ -0.19
CDH5-201ENST00000341529 DZIP1Q86YF9 867 aaKnown RBP13.87□□□□□ -0.19
CDH5-201ENST00000341529 NOL7Q9UMY1 257 aaKnown RBP13.87□□□□□ -0.19
CDH5-201ENST00000341529 IRS4O14654 1257 aaPredicted RBP13.87□□□□□ -0.19
CDH5-201ENST00000341529 BRD1O95696 1058 aa13.87□□□□□ -0.19
CDH5-201ENST00000341529 KRT18P05783 430 aaKnown RBP13.87□□□□□ -0.19
CDH5-201ENST00000341529 SPECC1Q5M775 1068 aa13.87□□□□□ -0.19
CDH5-201ENST00000341529 FAM182BQ5T319 152 aa13.87□□□□□ -0.19
CDH5-201ENST00000341529 STX8Q9UNK0 236 aa13.87□□□□□ -0.19
CDH5-201ENST00000341529 NIP7Q9Y221 180 aaKnown RBP eCLIP13.87□□□□□ -0.19
CDH5-201ENST00000341529 IL2RBP14784 551 aa13.86□□□□□ -0.19
CDH5-201ENST00000341529 STX1AQ16623 288 aa13.86□□□□□ -0.19
CDH5-201ENST00000341529 SLFNL1Q499Z3 407 aa13.86□□□□□ -0.19
CDH5-201ENST00000341529 SLC4A4Q9Y6R1 1079 aa13.86□□□□□ -0.19
CDH5-201ENST00000341529 ADCY10Q96PN6 1610 aa13.86□□□□□ -0.19
CDH5-201ENST00000341529 PRDM1O75626 825 aa13.86□□□□□ -0.19
CDH5-201ENST00000341529 SKILP12757 684 aa13.86□□□□□ -0.19
CDH5-201ENST00000341529 ATP6V1AP38606 617 aa13.86□□□□□ -0.19
CDH5-201ENST00000341529 SYKP43405 635 aa13.86□□□□□ -0.19
CDH5-201ENST00000341529 IQCA1Q86XH1 822 aa13.86□□□□□ -0.19
CDH5-201ENST00000341529 CTCFLQ8NI51 663 aaPredicted RBP13.86□□□□□ -0.19
CDH5-201ENST00000341529 SLC52A2Q9HAB3 445 aa13.86□□□□□ -0.19
CDH5-201ENST00000341529 MAGEC2Q9UBF1 373 aaPredicted RBP13.86□□□□□ -0.19
CDH5-201ENST00000341529 B4E1Z4 1266 aa13.86□□□□□ -0.19
CDH5-201ENST00000341529 RNF113AO15541 343 aaKnown RBP13.86□□□□□ -0.19
CDH5-201ENST00000341529 RPS6KB1P23443 525 aa13.86□□□□□ -0.19
CDH5-201ENST00000341529 UBXN4Q92575 508 aa13.86□□□□□ -0.19
CDH5-201ENST00000341529 CEP89Q96ST8 783 aa13.86□□□□□ -0.19
CDH5-201ENST00000341529 TCEAL9Q9UHQ7 104 aa13.86□□□□□ -0.19
CDH5-201ENST00000341529 hCG_1642624A0A1W2PR95 340 aa13.85□□□□□ -0.19
CDH5-201ENST00000341529 SMTNL1A8MU46 457 aa13.85□□□□□ -0.19
CDH5-201ENST00000341529 EPS15P42566 896 aa13.85□□□□□ -0.19
CDH5-201ENST00000341529 DZIP3Q86Y13 1208 aaKnown RBP13.85□□□□□ -0.19
CDH5-201ENST00000341529 SLAIN2Q9P270 581 aa13.85□□□□□ -0.19
CDH5-201ENST00000341529 ZPR1O75312 459 aa13.85□□□□□ -0.19
CDH5-201ENST00000341529 KCNQ4P56696 695 aa13.85□□□□□ -0.19
CDH5-201ENST00000341529 NLRP5P59047 1200 aa13.85□□□□□ -0.19
CDH5-201ENST00000341529 GPS2Q13227 327 aa13.85□□□□□ -0.19
CDH5-201ENST00000341529 SOGA3Q5TF21 947 aa13.85□□□□□ -0.19
CDH5-201ENST00000341529 MTERF4Q7Z6M4 381 aaKnown RBP13.85□□□□□ -0.19
CDH5-201ENST00000341529 RNF216Q9NWF9 866 aaPredicted RBP13.85□□□□□ -0.19
CDH5-201ENST00000341529 ZHX1Q9UKY1 873 aaPredicted RBP13.85□□□□□ -0.19
CDH5-201ENST00000341529 TPCN1Q9ULQ1 816 aa13.85□□□□□ -0.19
CDH5-201ENST00000341529 KIAA0232Q92628 1395 aa13.85□□□□□ -0.19
CDH5-201ENST00000341529 NEURL1BA8MQ27 555 aa13.85□□□□□ -0.19
CDH5-201ENST00000341529 TEX35Q5T0J7 233 aa13.85□□□□□ -0.19
CDH5-201ENST00000341529 MAGEB6Q8N7X4 407 aa13.85□□□□□ -0.19
CDH5-201ENST00000341529 EYA2O00167 538 aa13.84□□□□□ -0.19
CDH5-201ENST00000341529 LIG1P18858 919 aa13.84□□□□□ -0.19
CDH5-201ENST00000341529 STX17P56962 302 aa13.84□□□□□ -0.19
CDH5-201ENST00000341529 PPP4R3BQ5MIZ7 849 aa13.84□□□□□ -0.19
CDH5-201ENST00000341529 MRPS27Q92552 414 aaKnown RBP13.84□□□□□ -0.19
CDH5-201ENST00000341529 CLTCL1P53675 1640 aa13.84□□□□□ -0.19
CDH5-201ENST00000341529 TSPY2A6NKD2 308 aa13.84□□□□□ -0.19
CDH5-201ENST00000341529 KIF18AQ8NI77 898 aa13.84□□□□□ -0.19
CDH5-201ENST00000341529 TRERF1Q96PN7 1200 aa13.84□□□□□ -0.19
CDH5-201ENST00000341529 ZSCAN16Q9H4T2 348 aaPredicted RBP13.84□□□□□ -0.19
CDH5-201ENST00000341529 TRPM1Q7Z4N2 1603 aa13.84□□□□□ -0.19
CDH5-201ENST00000341529 MPHOSPH10O00566 681 aaKnown RBP13.84□□□□□ -0.19
CDH5-201ENST00000341529 LRRC24Q50LG9 513 aa13.84□□□□□ -0.19
CDH5-201ENST00000341529 ARHGAP29Q52LW3 1261 aa13.84□□□□□ -0.19
CDH5-201ENST00000341529 ABCC3O15438 1527 aa13.84□□□□□ -0.19
CDH5-201ENST00000341529 FAM193AP78312 1265 aa13.83□□□□□ -0.19
CDH5-201ENST00000341529 HSP90B2PQ58FF3 399 aa13.83□□□□□ -0.19
CDH5-201ENST00000341529 PHKBQ93100 1093 aa13.83□□□□□ -0.19
CDH5-201ENST00000341529 CCDC43Q96MW1 224 aaKnown RBP13.83□□□□□ -0.19
CDH5-201ENST00000341529 SPTLC2O15270 562 aa13.83□□□□□ -0.2
CDH5-201ENST00000341529 LARGE1O95461 756 aa13.83□□□□□ -0.2
CDH5-201ENST00000341529 EIF5P55010 431 aaKnown RBP13.83□□□□□ -0.2
CDH5-201ENST00000341529 WTAPQ15007 396 aa13.83□□□□□ -0.2
CDH5-201ENST00000341529 SMARCE1Q969G3 411 aa13.83□□□□□ -0.2
CDH5-201ENST00000341529 IBTKQ9P2D0 1353 aaPredicted RBP13.83□□□□□ -0.2
CDH5-201ENST00000341529 ZAP70P43403 619 aa13.83□□□□□ -0.2
CDH5-201ENST00000341529 CCDC102BQ68D86 513 aa13.83□□□□□ -0.2
CDH5-201ENST00000341529 CCDC70Q6NSX1 233 aa13.83□□□□□ -0.2
CDH5-201ENST00000341529 WASF1Q92558 559 aa13.83□□□□□ -0.2
CDH5-201ENST00000341529 XAGE2Q96GT9 111 aa13.83□□□□□ -0.2
CDH5-201ENST00000341529 PUS3Q9BZE2 481 aaKnown RBP13.83□□□□□ -0.2
CDH5-201ENST00000341529 CTDP1Q9Y5B0 961 aaPredicted RBP13.83□□□□□ -0.2
CDH5-201ENST00000341529 F8W031 263 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms