RNA–Protein interactions for RNA: ENST00000340729.9

CLPB-202, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2 BASIC

Gene CLPB, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-202ENST00000340729 IFFO2Q5TF58 517 aa24.31■■□□□ 1.48
CLPB-202ENST00000340729 CEP135Q66GS9 1140 aa24.31■■□□□ 1.48
CLPB-202ENST00000340729 MPRIPQ6WCQ1 1025 aa24.31■■□□□ 1.48
CLPB-202ENST00000340729 NYAP1Q6ZVC0 841 aa24.31■■□□□ 1.48
CLPB-202ENST00000340729 DDX41Q9UJV9 622 aaKnown RBP24.31■■□□□ 1.48
CLPB-202ENST00000340729 ALS2Q96Q42 1657 aa24.3■■□□□ 1.48
CLPB-202ENST00000340729 RGPD5Q99666 1765 aa24.3■■□□□ 1.48
CLPB-202ENST00000340729 ADD1P35611 737 aaKnown RBP24.3■■□□□ 1.48
CLPB-202ENST00000340729 GABPB1Q06547 395 aaPredicted RBP24.3■■□□□ 1.48
CLPB-202ENST00000340729 KCNH5Q8NCM2 988 aa24.3■■□□□ 1.48
CLPB-202ENST00000340729 COL15A1P39059 1388 aa24.3■■□□□ 1.48
CLPB-202ENST00000340729 PXDNQ92626 1479 aa24.29■■□□□ 1.48
CLPB-202ENST00000340729 C1orf141Q5JVX7 400 aa24.29■■□□□ 1.48
CLPB-202ENST00000340729 PFKFB2O60825 505 aa24.28■■□□□ 1.48
CLPB-202ENST00000340729 MORC2Q9Y6X9 1032 aaPredicted RBP24.28■■□□□ 1.48
CLPB-202ENST00000340729 CAMTA1Q9Y6Y1 1673 aa24.28■■□□□ 1.48
CLPB-202ENST00000340729 HMGB1P09429 215 aaKnown RBP24.28■■□□□ 1.48
CLPB-202ENST00000340729 Q6ZUG5 572 aa24.28■■□□□ 1.48
CLPB-202ENST00000340729 C11orf57Q6ZUT1 292 aaPredicted RBP24.28■■□□□ 1.48
CLPB-202ENST00000340729 COPRSQ9NQ92 184 aa24.28■■□□□ 1.48
CLPB-202ENST00000340729 IGKV5-2P06315 115 aa24.26■■□□□ 1.47
CLPB-202ENST00000340729 SCRN1Q12765 414 aa24.26■■□□□ 1.47
CLPB-202ENST00000340729 PDIA6Q15084 440 aa24.26■■□□□ 1.47
CLPB-202ENST00000340729 TICAM2Q86XR7 235 aa24.26■■□□□ 1.47
CLPB-202ENST00000340729 C19orf44Q9H6X5 657 aa24.26■■□□□ 1.47
CLPB-202ENST00000340729 ANO10Q9NW15 660 aa24.26■■□□□ 1.47
CLPB-202ENST00000340729 MST1RQ04912 1400 aa24.26■■□□□ 1.47
CLPB-202ENST00000340729 TMEM94Q12767 1356 aa24.26■■□□□ 1.47
CLPB-202ENST00000340729 KIF2AO00139 706 aaPredicted RBP24.25■■□□□ 1.47
CLPB-202ENST00000340729 SNW1Q13573 536 aaKnown RBP24.25■■□□□ 1.47
CLPB-202ENST00000340729 CCAR1Q8IX12 1150 aaKnown RBP24.25■■□□□ 1.47
CLPB-202ENST00000340729 ENGASEQ8NFI3 743 aa24.25■■□□□ 1.47
CLPB-202ENST00000340729 ZNF609O15014 1411 aa24.25■■□□□ 1.47
CLPB-202ENST00000340729 PTPN14Q15678 1187 aa24.25■■□□□ 1.47
CLPB-202ENST00000340729 LMOD2Q6P5Q4 547 aa24.25■■□□□ 1.47
CLPB-202ENST00000340729 CCDC73Q6ZRK6 1079 aa24.25■■□□□ 1.47
CLPB-202ENST00000340729 NSUN7Q8NE18 718 aaKnown RBP24.25■■□□□ 1.47
CLPB-202ENST00000340729 SIL1Q9H173 461 aa24.25■■□□□ 1.47
CLPB-202ENST00000340729 XIRP1Q702N8 1843 aaKnown RBP24.24■■□□□ 1.47
CLPB-202ENST00000340729 GCP02774 474 aa24.24■■□□□ 1.47
CLPB-202ENST00000340729 CYP21A2P08686 494 aa24.24■■□□□ 1.47
CLPB-202ENST00000340729 SKILP12757 684 aa24.24■■□□□ 1.47
CLPB-202ENST00000340729 HSP90B1P14625 803 aaKnown RBP24.24■■□□□ 1.47
CLPB-202ENST00000340729 CCZ1BP86790 482 aa24.24■■□□□ 1.47
CLPB-202ENST00000340729 CCZ1P86791 482 aaPredicted RBP24.24■■□□□ 1.47
CLPB-202ENST00000340729 SLFNL1Q499Z3 407 aa24.24■■□□□ 1.47
CLPB-202ENST00000340729 DHX40Q8IX18 779 aaKnown RBP24.24■■□□□ 1.47
CLPB-202ENST00000340729 ZNF397Q8NF99 534 aaPredicted RBP24.24■■□□□ 1.47
CLPB-202ENST00000340729 KIF18AQ8NI77 898 aa24.24■■□□□ 1.47
CLPB-202ENST00000340729 ZNF396Q96N95 335 aaPredicted RBP24.24■■□□□ 1.47
CLPB-202ENST00000340729 AGXT2Q9BYV1 514 aa24.24■■□□□ 1.47
CLPB-202ENST00000340729 NEURL1BA8MQ27 555 aa24.23■■□□□ 1.47
CLPB-202ENST00000340729 GSDMDP57764 484 aa24.23■■□□□ 1.47
CLPB-202ENST00000340729 FAM160A1Q05DH4 1040 aa24.23■■□□□ 1.47
CLPB-202ENST00000340729 MCMDC2Q4G0Z9 681 aa24.23■■□□□ 1.47
CLPB-202ENST00000340729 KRT28Q7Z3Y7 464 aa24.23■■□□□ 1.47
CLPB-202ENST00000340729 DBNLQ9UJU6 430 aaKnown RBP24.23■■□□□ 1.47
CLPB-202ENST00000340729 BECN2A8MW95 431 aa24.23■■□□□ 1.47
CLPB-202ENST00000340729 NEXNQ0ZGT2 675 aa24.23■■□□□ 1.47
CLPB-202ENST00000340729 TNNI3KQ59H18 835 aa24.23■■□□□ 1.47
CLPB-202ENST00000340729 LRRC59Q96AG4 307 aaKnown RBP24.23■■□□□ 1.47
CLPB-202ENST00000340729 DDX11Q96FC9 970 aa24.23■■□□□ 1.47
CLPB-202ENST00000340729 FPGT-TNNI3KV9GXZ4 949 aa24.23■■□□□ 1.47
CLPB-202ENST00000340729 SH3TC1Q8TE82 1336 aa24.22■■□□□ 1.47
CLPB-202ENST00000340729 LAMA4Q16363 1823 aa24.22■■□□□ 1.47
CLPB-202ENST00000340729 KINO60870 393 aaKnown RBP24.22■■□□□ 1.47
CLPB-202ENST00000340729 HSPA2P54652 639 aa24.22■■□□□ 1.47
CLPB-202ENST00000340729 GCKRQ14397 625 aa24.22■■□□□ 1.47
CLPB-202ENST00000340729 CHMP4CQ96CF2 233 aa24.22■■□□□ 1.47
CLPB-202ENST00000340729 ERO1AQ96HE7 468 aa24.22■■□□□ 1.47
CLPB-202ENST00000340729 GOLPH3LQ9H4A5 285 aa24.22■■□□□ 1.47
CLPB-202ENST00000340729 PRAMEF22A3QJZ6 481 aa24.22■■□□□ 1.47
CLPB-202ENST00000340729 CCDC69A6NI79 296 aa24.22■■□□□ 1.47
CLPB-202ENST00000340729 TAF3Q5VWG9 929 aa24.22■■□□□ 1.47
CLPB-202ENST00000340729 ARHGEF25Q86VW2 580 aa24.22■■□□□ 1.47
CLPB-202ENST00000340729 CEP57L1Q8IYX8 460 aa24.22■■□□□ 1.47
CLPB-202ENST00000340729 OSBPL5Q9H0X9 879 aaPredicted RBP24.22■■□□□ 1.47
CLPB-202ENST00000340729 IMPACTQ9P2X3 320 aa24.22■■□□□ 1.47
CLPB-202ENST00000340729 SALL1Q9NSC2 1324 aa24.21■■□□□ 1.47
CLPB-202ENST00000340729 RFX5P48382 616 aaPredicted RBP24.21■■□□□ 1.47
CLPB-202ENST00000340729 DHX32Q7L7V1 743 aaKnown RBP24.21■■□□□ 1.47
CLPB-202ENST00000340729 RIC3Q7Z5B4 369 aa24.21■■□□□ 1.47
CLPB-202ENST00000340729 CCAR2Q8N163 923 aaKnown RBP24.21■■□□□ 1.47
CLPB-202ENST00000340729 HAUS7Q99871 368 aa24.21■■□□□ 1.47
CLPB-202ENST00000340729 NAT10Q9H0A0 1025 aaKnown RBP24.21■■□□□ 1.47
CLPB-202ENST00000340729 FAM53CQ9NYF3 392 aa24.21■■□□□ 1.47
CLPB-202ENST00000340729 USP27XA6NNY8 438 aa24.2■■□□□ 1.47
CLPB-202ENST00000340729 DHX8Q14562 1220 aaKnown RBP24.2■■□□□ 1.47
CLPB-202ENST00000340729 EDC3Q96F86 508 aaKnown RBP24.2■■□□□ 1.47
CLPB-202ENST00000340729 ABCC6O95255 1503 aa24.2■■□□□ 1.46
CLPB-202ENST00000340729 METTL22Q9BUU2 404 aaPredicted RBP24.2■■□□□ 1.46
CLPB-202ENST00000340729 CTDNEP1O95476 244 aa24.19■■□□□ 1.46
CLPB-202ENST00000340729 NAA30Q147X3 362 aaPredicted RBP24.19■■□□□ 1.46
CLPB-202ENST00000340729 KLHDC4Q8TBB5 520 aa24.19■■□□□ 1.46
CLPB-202ENST00000340729 USP28Q96RU2 1077 aa24.19■■□□□ 1.46
CLPB-202ENST00000340729 PTPDC1A2A3K4 754 aa24.19■■□□□ 1.46
CLPB-202ENST00000340729 KCNJ6P48051 423 aa24.19■■□□□ 1.46
CLPB-202ENST00000340729 ARID5BQ14865 1188 aa24.19■■□□□ 1.46
CLPB-202ENST00000340729 RABL6Q3YEC7 729 aaPredicted RBP24.19■■□□□ 1.46
CLPB-202ENST00000340729 EPHA10Q5JZY3 1008 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms