RNA–Protein interactions for RNA: ENST00000340699.7

PBX1-201, Transcript of PBX homeobox 1, humanhuman

TSL 4

Gene PBX1, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-201ENST00000340699 FSTL1Q12841 308 aa28.39■■■□□ 2.14
PBX1-201ENST00000340699 IFIT5Q13325 482 aaKnown RBP28.39■■■□□ 2.14
PBX1-201ENST00000340699 SMC1BQ8NDV3 1235 aa28.39■■■□□ 2.14
PBX1-201ENST00000340699 API5Q9BZZ5 524 aaKnown RBP28.39■■■□□ 2.14
PBX1-201ENST00000340699 ZC3H12CQ9C0D7 883 aaKnown RBP28.39■■■□□ 2.14
PBX1-201ENST00000340699 LMBR1LQ6UX01 489 aa28.38■■■□□ 2.13
PBX1-201ENST00000340699 HACL1Q9UJ83 578 aa28.38■■■□□ 2.13
PBX1-201ENST00000340699 MINPP1Q9UNW1 487 aa28.38■■■□□ 2.13
PBX1-201ENST00000340699 SCN4AP35499 1836 aa28.37■■■□□ 2.13
PBX1-201ENST00000340699 G3V3G9 751 aa28.37■■■□□ 2.13
PBX1-201ENST00000340699 NBPF7P0C2Y1 421 aaPredicted RBP28.37■■■□□ 2.13
PBX1-201ENST00000340699 ATP2B4P23634 1241 aa28.37■■■□□ 2.13
PBX1-201ENST00000340699 DCAF8Q5TAQ9 597 aa28.37■■■□□ 2.13
PBX1-201ENST00000340699 UTYO14607 1347 aa28.37■■■□□ 2.13
PBX1-201ENST00000340699 KIF16BQ96L93 1317 aa28.37■■■□□ 2.13
PBX1-201ENST00000340699 SPEF2Q9C093 1822 aa28.36■■■□□ 2.13
PBX1-201ENST00000340699 LMOD1P29536 600 aaPredicted RBP28.36■■■□□ 2.13
PBX1-201ENST00000340699 CXCL9Q07325 125 aa28.36■■■□□ 2.13
PBX1-201ENST00000340699 CCDC57Q2TAC2 916 aa28.36■■■□□ 2.13
PBX1-201ENST00000340699 EPHA10Q5JZY3 1008 aa28.36■■■□□ 2.13
PBX1-201ENST00000340699 LTBP1Q14766 1721 aa28.35■■■□□ 2.13
PBX1-201ENST00000340699 CCT4P50991 539 aaKnown RBP28.35■■■□□ 2.13
PBX1-201ENST00000340699 TNIP1Q15025 636 aa28.35■■■□□ 2.13
PBX1-201ENST00000340699 CIAPIN1Q6FI81 312 aa28.35■■■□□ 2.13
PBX1-201ENST00000340699 SUCLG2Q96I99 432 aa28.35■■■□□ 2.13
PBX1-201ENST00000340699 TAF1DQ9H5J8 278 aaPredicted RBP28.35■■■□□ 2.13
PBX1-201ENST00000340699 HSPA6P17066 643 aa28.34■■■□□ 2.13
PBX1-201ENST00000340699 TAF7LQ5H9L4 462 aa28.34■■■□□ 2.13
PBX1-201ENST00000340699 ARHGAP45Q92619 1136 aa28.34■■■□□ 2.13
PBX1-201ENST00000340699 GPR101Q96P66 508 aaPredicted RBP28.34■■■□□ 2.13
PBX1-201ENST00000340699 ANKRD2Q9GZV1 360 aa28.34■■■□□ 2.13
PBX1-201ENST00000340699 DBNDD1Q9H9R9 158 aa28.34■■■□□ 2.13
PBX1-201ENST00000340699 IPO8O15397 1037 aaKnown RBP28.33■■■□□ 2.13
PBX1-201ENST00000340699 RAD17O75943 681 aa28.33■■■□□ 2.13
PBX1-201ENST00000340699 EPHX2P34913 555 aa28.32■■■□□ 2.12
PBX1-201ENST00000340699 DOK7Q18PE1 504 aa28.32■■■□□ 2.12
PBX1-201ENST00000340699 USP44Q9H0E7 712 aa28.32■■■□□ 2.12
PBX1-201ENST00000340699 YDJCA8MPS7 323 aa28.31■■■□□ 2.12
PBX1-201ENST00000340699 ECE2O60344 883 aa28.31■■■□□ 2.12
PBX1-201ENST00000340699 PNMA8AQ86V59 439 aaPredicted RBP28.31■■■□□ 2.12
PBX1-201ENST00000340699 EAPPQ56P03 285 aaPredicted RBP28.3■■■□□ 2.12
PBX1-201ENST00000340699 LEMD3Q9Y2U8 911 aa28.3■■■□□ 2.12
PBX1-201ENST00000340699 BCAR3O75815 825 aa28.29■■■□□ 2.12
PBX1-201ENST00000340699 FRAT1Q92837 279 aaPredicted RBP28.29■■■□□ 2.12
PBX1-201ENST00000340699 KAZALD1Q96I82 304 aa28.29■■■□□ 2.12
PBX1-201ENST00000340699 BICC1Q9H694 974 aaKnown RBP28.29■■■□□ 2.12
PBX1-201ENST00000340699 SCNN1DP51172 638 aa28.28■■■□□ 2.12
PBX1-201ENST00000340699 CHRNDQ07001 517 aa28.28■■■□□ 2.12
PBX1-201ENST00000340699 CHADLQ6NUI6 762 aa28.28■■■□□ 2.12
PBX1-201ENST00000340699 LDHAL6AQ6ZMR3 332 aa28.28■■■□□ 2.12
PBX1-201ENST00000340699 LDHDQ86WU2 507 aa28.28■■■□□ 2.12
PBX1-201ENST00000340699 CLEC11AQ9Y240 323 aa28.28■■■□□ 2.12
PBX1-201ENST00000340699 KCNJ4P48050 445 aa28.27■■■□□ 2.12
PBX1-201ENST00000340699 ZNF594Q96JF6 807 aaPredicted RBP28.27■■■□□ 2.12
PBX1-201ENST00000340699 CNNM1Q9NRU3 951 aa28.27■■■□□ 2.12
PBX1-201ENST00000340699 EPS15P42566 896 aa28.26■■■□□ 2.11
PBX1-201ENST00000340699 GMPSP49915 693 aaPredicted RBP28.26■■■□□ 2.11
PBX1-201ENST00000340699 RABL6Q3YEC7 729 aaPredicted RBP28.26■■■□□ 2.11
PBX1-201ENST00000340699 GPRC5DQ9NZD1 345 aa28.26■■■□□ 2.11
PBX1-201ENST00000340699 HDAC5Q9UQL6 1122 aa28.26■■■□□ 2.11
PBX1-201ENST00000340699 MED23Q9ULK4 1368 aa28.25■■■□□ 2.11
PBX1-201ENST00000340699 ZNF804BA4D1E1 1349 aa28.25■■■□□ 2.11
PBX1-201ENST00000340699 POTEIP0CG38 1075 aa28.25■■■□□ 2.11
PBX1-201ENST00000340699 POTEJP0CG39 1038 aa28.25■■■□□ 2.11
PBX1-201ENST00000340699 APLP1P51693 650 aa28.25■■■□□ 2.11
PBX1-201ENST00000340699 PSMD14O00487 310 aa28.24■■■□□ 2.11
PBX1-201ENST00000340699 UBTFL1P0CB47 393 aaPredicted RBP28.24■■■□□ 2.11
PBX1-201ENST00000340699 ATF7IPQ6VMQ6 1270 aa28.24■■■□□ 2.11
PBX1-201ENST00000340699 WTIPA6NIX2 430 aaPredicted RBP28.23■■■□□ 2.11
PBX1-201ENST00000340699 PODNQ7Z5L7 613 aa28.23■■■□□ 2.11
PBX1-201ENST00000340699 ANKRD44Q8N8A2 993 aa28.23■■■□□ 2.11
PBX1-201ENST00000340699 INTS3Q68E01 1043 aaKnown RBP28.22■■■□□ 2.11
PBX1-201ENST00000340699 USP50Q70EL3 339 aaPredicted RBP28.22■■■□□ 2.11
PBX1-201ENST00000340699 HELBQ8NG08 1087 aaPredicted RBP28.22■■■□□ 2.11
PBX1-201ENST00000340699 KCNQ5Q9NR82 932 aa28.22■■■□□ 2.11
PBX1-201ENST00000340699 ADARB2Q9NS39 739 aaKnown RBP28.22■■■□□ 2.11
PBX1-201ENST00000340699 TAF5LO75529 589 aa28.21■■■□□ 2.11
PBX1-201ENST00000340699 TRIM27P14373 513 aa28.21■■■□□ 2.11
PBX1-201ENST00000340699 ZKSCAN2Q63HK3 967 aa28.21■■■□□ 2.11
PBX1-201ENST00000340699 ZBTB12Q9Y330 459 aaPredicted RBP28.21■■■□□ 2.11
PBX1-201ENST00000340699 H7C1D1 291 aa28.2■■■□□ 2.1
PBX1-201ENST00000340699 PLIN1O60240 522 aa28.2■■■□□ 2.1
PBX1-201ENST00000340699 RPS12P25398 132 aaKnown RBP28.2■■■□□ 2.1
PBX1-201ENST00000340699 DPF2Q92785 391 aa28.2■■■□□ 2.1
PBX1-201ENST00000340699 COA1Q9GZY4 146 aa28.2■■■□□ 2.1
PBX1-201ENST00000340699 CNOT7Q9UIV1 285 aaKnown RBP28.2■■■□□ 2.1
PBX1-201ENST00000340699 VIL1P09327 827 aaKnown RBP28.18■■■□□ 2.1
PBX1-201ENST00000340699 CLUAP1Q96AJ1 413 aa28.18■■■□□ 2.1
PBX1-201ENST00000340699 GNAI3P08754 354 aa28.17■■■□□ 2.1
PBX1-201ENST00000340699 TXNRD3Q86VQ6 643 aa28.17■■■□□ 2.1
PBX1-201ENST00000340699 MICALL2Q8IY33 904 aa28.17■■■□□ 2.1
PBX1-201ENST00000340699 PUS3Q9BZE2 481 aaKnown RBP28.17■■■□□ 2.1
PBX1-201ENST00000340699 USP17L3A6NCW0 530 aa28.16■■■□□ 2.1
PBX1-201ENST00000340699 USP17L4A6NCW7 530 aa28.16■■■□□ 2.1
PBX1-201ENST00000340699 USP17L1Q7RTZ2 530 aa28.16■■■□□ 2.1
PBX1-201ENST00000340699 MROH5Q6ZUA9 1318 aa28.16■■■□□ 2.1
PBX1-201ENST00000340699 ADAMTSL1Q8N6G6 1762 aa28.15■■■□□ 2.1
PBX1-201ENST00000340699 MEIS3Q99687 375 aa28.15■■■□□ 2.1
PBX1-201ENST00000340699 LRRFIP2Q9Y608 721 aaKnown RBP28.15■■■□□ 2.1
PBX1-201ENST00000340699 SCN9AQ15858 1988 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms