RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 ASXL2Q76L83 1435 aa17.06■□□□□ 0.32
RRP1B-201ENST00000340648 ARHGEF5Q12774 1597 aa17.06■□□□□ 0.32
RRP1B-201ENST00000340648 SOGA3Q5TF21 947 aa17.06■□□□□ 0.32
RRP1B-201ENST00000340648 MCM3P25205 808 aa17.06■□□□□ 0.32
RRP1B-201ENST00000340648 FAM160A1Q05DH4 1040 aa17.06■□□□□ 0.32
RRP1B-201ENST00000340648 DHX32Q7L7V1 743 aaKnown RBP17.06■□□□□ 0.32
RRP1B-201ENST00000340648 BICC1Q9H694 974 aaKnown RBP17.06■□□□□ 0.32
RRP1B-201ENST00000340648 CWC25Q9NXE8 425 aaPredicted RBP17.06■□□□□ 0.32
RRP1B-201ENST00000340648 KIF20AO95235 890 aa17.06■□□□□ 0.32
RRP1B-201ENST00000340648 CEBPAP49715 358 aaPredicted RBP17.06■□□□□ 0.32
RRP1B-201ENST00000340648 MAP3K12Q12852 859 aa17.06■□□□□ 0.32
RRP1B-201ENST00000340648 CCDC129Q6ZRS4 1044 aa17.06■□□□□ 0.32
RRP1B-201ENST00000340648 NBPF7P0C2Y1 421 aaPredicted RBP17.05■□□□□ 0.32
RRP1B-201ENST00000340648 KARSQ15046 597 aaKnown RBP17.05■□□□□ 0.32
RRP1B-201ENST00000340648 ANKLE2Q86XL3 938 aa17.05■□□□□ 0.32
RRP1B-201ENST00000340648 UTP14AQ9BVJ6 771 aaKnown RBP17.05■□□□□ 0.32
RRP1B-201ENST00000340648 PRC1O43663 620 aa17.05■□□□□ 0.32
RRP1B-201ENST00000340648 AFMP43652 599 aa17.05■□□□□ 0.32
RRP1B-201ENST00000340648 N4BP3O15049 544 aa17.05■□□□□ 0.32
RRP1B-201ENST00000340648 RANBP6O60518 1105 aaKnown RBP17.05■□□□□ 0.32
RRP1B-201ENST00000340648 LRMPQ12912 555 aa17.05■□□□□ 0.32
RRP1B-201ENST00000340648 CTR9Q6PD62 1173 aa17.05■□□□□ 0.32
RRP1B-201ENST00000340648 CCDC43Q96MW1 224 aaKnown RBP17.05■□□□□ 0.32
RRP1B-201ENST00000340648 PAG1Q9NWQ8 432 aa17.05■□□□□ 0.32
RRP1B-201ENST00000340648 IBTKQ9P2D0 1353 aaPredicted RBP17.05■□□□□ 0.32
RRP1B-201ENST00000340648 TUBB4AP04350 444 aa17.04■□□□□ 0.32
RRP1B-201ENST00000340648 TFCP2Q12800 502 aa17.04■□□□□ 0.32
RRP1B-201ENST00000340648 SIRT2Q8IXJ6 389 aa17.04■□□□□ 0.32
RRP1B-201ENST00000340648 ANKRD24Q8TF21 1146 aa17.04■□□□□ 0.32
RRP1B-201ENST00000340648 SBNO2Q9Y2G9 1366 aa17.04■□□□□ 0.32
RRP1B-201ENST00000340648 ATP10AO60312 1499 aa17.04■□□□□ 0.32
RRP1B-201ENST00000340648 ERLIN2O94905 339 aa17.04■□□□□ 0.32
RRP1B-201ENST00000340648 ME3Q16798 604 aa17.04■□□□□ 0.32
RRP1B-201ENST00000340648 NSFL1CQ9UNZ2 370 aaKnown RBP17.04■□□□□ 0.32
RRP1B-201ENST00000340648 ZBTB43O43298 467 aa17.03■□□□□ 0.32
RRP1B-201ENST00000340648 FKBP15Q5T1M5 1219 aa17.03■□□□□ 0.32
RRP1B-201ENST00000340648 KANK3Q6NY19 840 aa17.03■□□□□ 0.32
RRP1B-201ENST00000340648 TAF4BQ92750 862 aa17.03■□□□□ 0.32
RRP1B-201ENST00000340648 GOLGA1Q92805 767 aa17.03■□□□□ 0.32
RRP1B-201ENST00000340648 JAK2O60674 1132 aa17.03■□□□□ 0.32
RRP1B-201ENST00000340648 GPTP24298 496 aa17.03■□□□□ 0.32
RRP1B-201ENST00000340648 IKQ13123 557 aaPredicted RBP17.03■□□□□ 0.32
RRP1B-201ENST00000340648 AKAP4Q5JQC9 854 aa17.03■□□□□ 0.32
RRP1B-201ENST00000340648 KLHDC4Q8TBB5 520 aa17.03■□□□□ 0.32
RRP1B-201ENST00000340648 LRRC59Q96AG4 307 aaKnown RBP17.03■□□□□ 0.32
RRP1B-201ENST00000340648 EDC4Q6P2E9 1401 aaKnown RBP17.03■□□□□ 0.32
RRP1B-201ENST00000340648 SNRPA1P09661 255 aaKnown RBP17.03■□□□□ 0.32
RRP1B-201ENST00000340648 IBSPP21815 317 aaPredicted RBP17.03■□□□□ 0.32
RRP1B-201ENST00000340648 LDHAL6AQ6ZMR3 332 aa17.03■□□□□ 0.32
RRP1B-201ENST00000340648 CTCFLQ8NI51 663 aaPredicted RBP17.03■□□□□ 0.32
RRP1B-201ENST00000340648 LZTFL1Q9NQ48 299 aa17.03■□□□□ 0.32
RRP1B-201ENST00000340648 PYCARDQ9ULZ3 195 aa17.03■□□□□ 0.32
RRP1B-201ENST00000340648 CTAGE15A4D2H0 777 aa17.02■□□□□ 0.32
RRP1B-201ENST00000340648 CTAGE8P0CG41 777 aa17.02■□□□□ 0.32
RRP1B-201ENST00000340648 CTAGE6Q86UF2 777 aa17.02■□□□□ 0.32
RRP1B-201ENST00000340648 CTAGE4Q8IX94 777 aa17.02■□□□□ 0.32
RRP1B-201ENST00000340648 PLA2R1Q13018 1463 aa17.02■□□□□ 0.32
RRP1B-201ENST00000340648 IGHMBP2P38935 993 aaKnown RBP17.02■□□□□ 0.32
RRP1B-201ENST00000340648 ZFYVE27Q5T4F4 411 aa17.02■□□□□ 0.32
RRP1B-201ENST00000340648 NCOA5Q9HCD5 579 aaKnown RBP17.02■□□□□ 0.32
RRP1B-201ENST00000340648 PUF60Q9UHX1 559 aaKnown RBP17.02■□□□□ 0.32
RRP1B-201ENST00000340648 ATP7AQ04656 1500 aa17.02■□□□□ 0.31
RRP1B-201ENST00000340648 CCDC175P0C221 793 aa17.02■□□□□ 0.31
RRP1B-201ENST00000340648 ATP2B2Q01814 1243 aa17.02■□□□□ 0.31
RRP1B-201ENST00000340648 MTMR6Q9Y217 621 aa17.02■□□□□ 0.31
RRP1B-201ENST00000340648 EVCP57679 992 aa17.01■□□□□ 0.31
RRP1B-201ENST00000340648 NLRP5P59047 1200 aa17.01■□□□□ 0.31
RRP1B-201ENST00000340648 PLXNC1O60486 1568 aa17.01■□□□□ 0.31
RRP1B-201ENST00000340648 STARD3NLO95772 234 aa17.01■□□□□ 0.31
RRP1B-201ENST00000340648 RSPH14Q9UHP6 348 aa17.01■□□□□ 0.31
RRP1B-201ENST00000340648 RGS12O14924 1447 aa17.01■□□□□ 0.31
RRP1B-201ENST00000340648 MATR3P43243 847 aaKnown RBP eCLIP17.01■□□□□ 0.31
RRP1B-201ENST00000340648 JADE2Q9NQC1 790 aa17.01■□□□□ 0.31
RRP1B-201ENST00000340648 CAPN2P17655 700 aa17.01■□□□□ 0.31
RRP1B-201ENST00000340648 ENOX2Q16206 610 aaKnown RBP17.01■□□□□ 0.31
RRP1B-201ENST00000340648 CACNA2D4Q7Z3S7 1137 aa17.01■□□□□ 0.31
RRP1B-201ENST00000340648 ANKRD18BA2A2Z9 1011 aa17■□□□□ 0.31
RRP1B-201ENST00000340648 USO1O60763 962 aaKnown RBP17■□□□□ 0.31
RRP1B-201ENST00000340648 PAFAH1B1P43034 410 aa17■□□□□ 0.31
RRP1B-201ENST00000340648 MFSD6Q6ZSS7 791 aa17■□□□□ 0.31
RRP1B-201ENST00000340648 TAX1BP1Q86VP1 789 aa17■□□□□ 0.31
RRP1B-201ENST00000340648 RXRAP19793 462 aa17■□□□□ 0.31
RRP1B-201ENST00000340648 PTH1RQ03431 593 aa17■□□□□ 0.31
RRP1B-201ENST00000340648 IQCA1Q86XH1 822 aa17■□□□□ 0.31
RRP1B-201ENST00000340648 IFNL2Q8IZJ0 200 aa17■□□□□ 0.31
RRP1B-201ENST00000340648 RNF41Q9H4P4 317 aaPredicted RBP17■□□□□ 0.31
RRP1B-201ENST00000340648 TRMT112Q9UI30 125 aaKnown RBP17■□□□□ 0.31
RRP1B-201ENST00000340648 KIAA0232Q92628 1395 aa17■□□□□ 0.31
RRP1B-201ENST00000340648 GABPB1Q06547 395 aaPredicted RBP17■□□□□ 0.31
RRP1B-201ENST00000340648 SSH2Q76I76 1423 aa17■□□□□ 0.31
RRP1B-201ENST00000340648 MTIF2P46199 727 aaKnown RBP17■□□□□ 0.31
RRP1B-201ENST00000340648 UNC5CLQ8IV45 518 aa17■□□□□ 0.31
RRP1B-201ENST00000340648 VPS18Q9P253 973 aa17■□□□□ 0.31
RRP1B-201ENST00000340648 PHACTR2O75167 634 aa16.99■□□□□ 0.31
RRP1B-201ENST00000340648 MYL5Q02045 173 aa16.99■□□□□ 0.31
RRP1B-201ENST00000340648 BMP2KQ9NSY1 1161 aaPredicted RBP16.99■□□□□ 0.31
RRP1B-201ENST00000340648 ZFYP08048 801 aaPredicted RBP16.99■□□□□ 0.31
RRP1B-201ENST00000340648 STX17P56962 302 aa16.99■□□□□ 0.31
RRP1B-201ENST00000340648 OTUD7BQ6GQQ9 843 aa16.99■□□□□ 0.31
RRP1B-201ENST00000340648 NDUFB9Q9Y6M9 179 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms