RNA–Protein interactions for RNA: ENST00000340326.2

SH2D6-201, Transcript of SH2 domain containing 6, humanhuman

TSL 1 (best)

Gene SH2D6, Length 894 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D6-201ENST00000340326 LRRC24Q50LG9 513 aa12.58□□□□□ -0.4
SH2D6-201ENST00000340326 SLC10A5Q5PT55 438 aa12.58□□□□□ -0.4
SH2D6-201ENST00000340326 VPS53Q5VIR6 699 aa12.58□□□□□ -0.4
SH2D6-201ENST00000340326 TMED8Q6PL24 325 aaPredicted RBP12.58□□□□□ -0.4
SH2D6-201ENST00000340326 LDHAL6AQ6ZMR3 332 aa12.58□□□□□ -0.4
SH2D6-201ENST00000340326 NYXQ9GZU5 481 aa12.58□□□□□ -0.4
SH2D6-201ENST00000340326 PAG1Q9NWQ8 432 aa12.58□□□□□ -0.4
SH2D6-201ENST00000340326 NARFQ9UHQ1 456 aa12.58□□□□□ -0.4
SH2D6-201ENST00000340326 PALD1Q9ULE6 856 aa12.58□□□□□ -0.4
SH2D6-201ENST00000340326 TBC1D2BQ9UPU7 963 aa12.58□□□□□ -0.4
SH2D6-201ENST00000340326 SNX14Q9Y5W7 946 aa12.58□□□□□ -0.4
SH2D6-201ENST00000340326 U3KPZ7 1027 aaPredicted RBP12.58□□□□□ -0.4
SH2D6-201ENST00000340326 KCNQ2O43526 872 aa12.57□□□□□ -0.4
SH2D6-201ENST00000340326 PDE8BO95263 885 aa12.57□□□□□ -0.4
SH2D6-201ENST00000340326 CYP2E1P05181 493 aaPredicted RBP12.57□□□□□ -0.4
SH2D6-201ENST00000340326 UQCRFS1P1P0C7P4 283 aa12.57□□□□□ -0.4
SH2D6-201ENST00000340326 GPTP24298 496 aa12.57□□□□□ -0.4
SH2D6-201ENST00000340326 SSFA2P28290 1259 aa12.57□□□□□ -0.4
SH2D6-201ENST00000340326 TTF1Q15361 905 aaPredicted RBP12.57□□□□□ -0.4
SH2D6-201ENST00000340326 SF3B3Q15393 1217 aaKnown RBP12.57□□□□□ -0.4
SH2D6-201ENST00000340326 PUM3Q15397 648 aaKnown RBP12.57□□□□□ -0.4
SH2D6-201ENST00000340326 MCMDC2Q4G0Z9 681 aa12.57□□□□□ -0.4
SH2D6-201ENST00000340326 LINC00116Q8NCU8 138 aa12.57□□□□□ -0.4
SH2D6-201ENST00000340326 LPIN2Q92539 896 aa12.57□□□□□ -0.4
SH2D6-201ENST00000340326 JARID2Q92833 1246 aaPredicted RBP12.57□□□□□ -0.4
SH2D6-201ENST00000340326 TTC14Q96N46 770 aa12.57□□□□□ -0.4
SH2D6-201ENST00000340326 CDC5LQ99459 802 aaKnown RBP12.57□□□□□ -0.4
SH2D6-201ENST00000340326 DSCC1Q9BVC3 393 aa12.57□□□□□ -0.4
SH2D6-201ENST00000340326 BCL11BQ9C0K0 894 aaPredicted RBP12.57□□□□□ -0.4
SH2D6-201ENST00000340326 BCL11AQ9H165 835 aa12.57□□□□□ -0.4
SH2D6-201ENST00000340326 GREM2Q9H772 168 aa12.57□□□□□ -0.4
SH2D6-201ENST00000340326 ZSWIM6Q9HCJ5 1215 aa12.57□□□□□ -0.4
SH2D6-201ENST00000340326 SH2B1Q9NRF2 756 aaPredicted RBP12.57□□□□□ -0.4
SH2D6-201ENST00000340326 TAF1LQ8IZX4 1826 aa12.56□□□□□ -0.4
SH2D6-201ENST00000340326 A0A0D9SFI3 127 aa12.56□□□□□ -0.4
SH2D6-201ENST00000340326 TAF5LO75529 589 aa12.56□□□□□ -0.4
SH2D6-201ENST00000340326 MAP4K4O95819 1239 aaPredicted RBP12.56□□□□□ -0.4
SH2D6-201ENST00000340326 IFIT1P09914 478 aaKnown RBP12.56□□□□□ -0.4
SH2D6-201ENST00000340326 FGFR2P21802 821 aa12.56□□□□□ -0.4
SH2D6-201ENST00000340326 ARID4AP29374 1257 aaPredicted RBP12.56□□□□□ -0.4
SH2D6-201ENST00000340326 NBR1Q14596 966 aa12.56□□□□□ -0.4
SH2D6-201ENST00000340326 ANKRD1Q15327 319 aa12.56□□□□□ -0.4
SH2D6-201ENST00000340326 ATP2B3Q16720 1220 aa12.56□□□□□ -0.4
SH2D6-201ENST00000340326 METTL24Q5JXM2 366 aa12.56□□□□□ -0.4
SH2D6-201ENST00000340326 ZMYM1Q5SVZ6 1142 aa12.56□□□□□ -0.4
SH2D6-201ENST00000340326 SUSD4Q5VX71 490 aa12.56□□□□□ -0.4
SH2D6-201ENST00000340326 TMX3Q96JJ7 454 aa12.56□□□□□ -0.4
SH2D6-201ENST00000340326 ZSCAN31Q96LW9 406 aaPredicted RBP12.56□□□□□ -0.4
SH2D6-201ENST00000340326 NIP7Q9Y221 180 aaKnown RBP eCLIP12.56□□□□□ -0.4
SH2D6-201ENST00000340326 C4BP0C0L5 1744 aa12.55□□□□□ -0.4
SH2D6-201ENST00000340326 HMGB1P09429 215 aaKnown RBP12.55□□□□□ -0.4
SH2D6-201ENST00000340326 MCM4P33991 863 aa12.55□□□□□ -0.4
SH2D6-201ENST00000340326 SLC27A3Q5K4L6 730 aa12.55□□□□□ -0.4
SH2D6-201ENST00000340326 ZSCAN25Q6NSZ9 544 aa12.55□□□□□ -0.4
SH2D6-201ENST00000340326 XAGE2Q96GT9 111 aa12.55□□□□□ -0.4
SH2D6-201ENST00000340326 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.55□□□□□ -0.4
SH2D6-201ENST00000340326 CNNM1Q9NRU3 951 aa12.55□□□□□ -0.4
SH2D6-201ENST00000340326 RBM8AQ9Y5S9 174 aaKnown RBP12.55□□□□□ -0.4
SH2D6-201ENST00000340326 TTC39AQ5SRH9 613 aa12.54□□□□□ -0.4
SH2D6-201ENST00000340326 CREB3L3Q68CJ9 461 aa12.54□□□□□ -0.4
SH2D6-201ENST00000340326 ZNF594Q96JF6 807 aaPredicted RBP12.54□□□□□ -0.4
SH2D6-201ENST00000340326 FAM227BQ96M60 508 aa12.54□□□□□ -0.4
SH2D6-201ENST00000340326 NEUROD6Q96NK8 337 aa12.54□□□□□ -0.4
SH2D6-201ENST00000340326 ARXQ96QS3 562 aa12.54□□□□□ -0.4
SH2D6-201ENST00000340326 PUS3Q9BZE2 481 aaKnown RBP12.54□□□□□ -0.4
SH2D6-201ENST00000340326 CCNL1Q9UK58 526 aaPredicted RBP12.54□□□□□ -0.4
SH2D6-201ENST00000340326 LIMCH1Q9UPQ0 1083 aa12.54□□□□□ -0.4
SH2D6-201ENST00000340326 RTCBQ9Y3I0 505 aaKnown RBP12.54□□□□□ -0.4
SH2D6-201ENST00000340326 CYP46A1Q9Y6A2 500 aa12.54□□□□□ -0.4
SH2D6-201ENST00000340326 CARMIL3Q8ND23 1372 aa12.54□□□□□ -0.4
SH2D6-201ENST00000340326 GOLGA6L22H0YM25 854 aa12.53□□□□□ -0.4
SH2D6-201ENST00000340326 RNF113AO15541 343 aaKnown RBP12.53□□□□□ -0.4
SH2D6-201ENST00000340326 FRAT2O75474 233 aaPredicted RBP12.53□□□□□ -0.4
SH2D6-201ENST00000340326 SLC5A1P13866 664 aa12.53□□□□□ -0.4
SH2D6-201ENST00000340326 IGHMBP2P38935 993 aaKnown RBP12.53□□□□□ -0.4
SH2D6-201ENST00000340326 TIMM10P62072 90 aa12.53□□□□□ -0.4
SH2D6-201ENST00000340326 PTH1RQ03431 593 aa12.53□□□□□ -0.4
SH2D6-201ENST00000340326 GORABQ5T7V8 394 aa12.53□□□□□ -0.4
SH2D6-201ENST00000340326 FAM196AQ6ZSG2 479 aa12.53□□□□□ -0.4
SH2D6-201ENST00000340326 RUFY3Q7L099 469 aa12.53□□□□□ -0.4
SH2D6-201ENST00000340326 FBXL16Q8N461 479 aa12.53□□□□□ -0.4
SH2D6-201ENST00000340326 CHMP4CQ96CF2 233 aa12.53□□□□□ -0.4
SH2D6-201ENST00000340326 DNAJC2Q99543 621 aaKnown RBP12.53□□□□□ -0.4
SH2D6-201ENST00000340326 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.53□□□□□ -0.4
SH2D6-201ENST00000340326 ZMYM6O95789 1325 aa12.53□□□□□ -0.4
SH2D6-201ENST00000340326 PDS5AQ29RF7 1337 aaKnown RBP12.53□□□□□ -0.4
SH2D6-201ENST00000340326 C4AP0C0L4 1744 aa12.52□□□□□ -0.41
SH2D6-201ENST00000340326 SLC27A2O14975 620 aa12.52□□□□□ -0.41
SH2D6-201ENST00000340326 SKOR2Q2VWA4 1001 aaPredicted RBP12.52□□□□□ -0.41
SH2D6-201ENST00000340326 SEPT12Q8IYM1 358 aa12.52□□□□□ -0.41
SH2D6-201ENST00000340326 RASEFQ8IZ41 740 aa12.52□□□□□ -0.41
SH2D6-201ENST00000340326 APPBP2Q92624 585 aa12.52□□□□□ -0.41
SH2D6-201ENST00000340326 MPHOSPH8Q99549 860 aa12.52□□□□□ -0.41
SH2D6-201ENST00000340326 ISY1Q9ULR0 285 aaKnown RBP12.52□□□□□ -0.41
SH2D6-201ENST00000340326 A0A0G2JS52 829 aa12.51□□□□□ -0.41
SH2D6-201ENST00000340326 GOLIM4O00461 696 aa12.51□□□□□ -0.41
SH2D6-201ENST00000340326 KCNJ4P48050 445 aa12.51□□□□□ -0.41
SH2D6-201ENST00000340326 RBM6P78332 1123 aaKnown RBP12.51□□□□□ -0.41
SH2D6-201ENST00000340326 UBE3CQ15386 1083 aa12.51□□□□□ -0.41
SH2D6-201ENST00000340326 PRPF40BQ6NWY9 871 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms