RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 KLHL34Q8N239 644 aa22.14■■□□□ 1.13
SDCBP2-201ENST00000339987 OS9Q13438 667 aaPredicted RBP22.13■■□□□ 1.13
SDCBP2-201ENST00000339987 FHDC1Q9C0D6 1143 aaPredicted RBP22.13■■□□□ 1.13
SDCBP2-201ENST00000339987 LRRC37AA6NMS7 1700 aa22.12■■□□□ 1.13
SDCBP2-201ENST00000339987 MROH5Q6ZUA9 1318 aa22.12■■□□□ 1.13
SDCBP2-201ENST00000339987 PPEF1O14829 653 aaPredicted RBP22.12■■□□□ 1.13
SDCBP2-201ENST00000339987 TTLL6Q8N841 843 aa22.12■■□□□ 1.13
SDCBP2-201ENST00000339987 BRCA1P38398 1863 aaKnown RBP22.12■■□□□ 1.13
SDCBP2-201ENST00000339987 SASH1O94885 1247 aa22.11■■□□□ 1.13
SDCBP2-201ENST00000339987 PRPF40BQ6NWY9 871 aaKnown RBP22.11■■□□□ 1.13
SDCBP2-201ENST00000339987 KIF1BPQ96EK5 621 aa22.11■■□□□ 1.13
SDCBP2-201ENST00000339987 PIM2Q9P1W9 311 aa22.11■■□□□ 1.13
SDCBP2-201ENST00000339987 SLX4Q8IY92 1834 aa22.1■■□□□ 1.13
SDCBP2-201ENST00000339987 SP8Q8IXZ3 490 aa22.1■■□□□ 1.13
SDCBP2-201ENST00000339987 RHPN1Q8TCX5 695 aa22.1■■□□□ 1.13
SDCBP2-201ENST00000339987 MINPP1Q9UNW1 487 aa22.1■■□□□ 1.13
SDCBP2-201ENST00000339987 ATP6V0A2Q9Y487 856 aa22.1■■□□□ 1.13
SDCBP2-201ENST00000339987 CACNA1SQ13698 1873 aa22.1■■□□□ 1.13
SDCBP2-201ENST00000339987 METTL24Q5JXM2 366 aa22.09■■□□□ 1.13
SDCBP2-201ENST00000339987 NLGN2Q8NFZ4 835 aa22.09■■□□□ 1.13
SDCBP2-201ENST00000339987 LRRCC1Q9C099 1032 aa22.09■■□□□ 1.13
SDCBP2-201ENST00000339987 CEP126Q9P2H0 1117 aa22.09■■□□□ 1.13
SDCBP2-201ENST00000339987 A0A1B0GUL6 1792 aa22.09■■□□□ 1.13
SDCBP2-201ENST00000339987 CHRNDQ07001 517 aa22.08■■□□□ 1.13
SDCBP2-201ENST00000339987 VGLL2Q8N8G2 317 aa22.08■■□□□ 1.13
SDCBP2-201ENST00000339987 ANKRD2Q9GZV1 360 aa22.08■■□□□ 1.13
SDCBP2-201ENST00000339987 NUCB1Q02818 461 aa22.07■■□□□ 1.12
SDCBP2-201ENST00000339987 TFCP2Q12800 502 aa22.07■■□□□ 1.12
SDCBP2-201ENST00000339987 C7orf43Q8WVR3 580 aa22.07■■□□□ 1.12
SDCBP2-201ENST00000339987 APBB1O00213 710 aa22.06■■□□□ 1.12
SDCBP2-201ENST00000339987 PDE8BO95263 885 aa22.06■■□□□ 1.12
SDCBP2-201ENST00000339987 DALRD3Q5D0E6 543 aaKnown RBP22.06■■□□□ 1.12
SDCBP2-201ENST00000339987 CC2D2BQ6DHV5 1058 aa22.06■■□□□ 1.12
SDCBP2-201ENST00000339987 SYT17Q9BSW7 474 aa22.06■■□□□ 1.12
SDCBP2-201ENST00000339987 GPR108Q9NPR9 543 aa22.06■■□□□ 1.12
SDCBP2-201ENST00000339987 ANKRD45Q5TZF3 282 aa22.06■■□□□ 1.12
SDCBP2-201ENST00000339987 TMX4Q9H1E5 349 aaPredicted RBP22.05■■□□□ 1.12
SDCBP2-201ENST00000339987 PODXL2Q9NZ53 605 aa22.05■■□□□ 1.12
SDCBP2-201ENST00000339987 ZBTB47Q9UFB7 747 aaPredicted RBP22.05■■□□□ 1.12
SDCBP2-201ENST00000339987 AKAP2Q9Y2D5 859 aa22.05■■□□□ 1.12
SDCBP2-201ENST00000339987 XDHP47989 1333 aa22.04■■□□□ 1.12
SDCBP2-201ENST00000339987 GRIPAP1Q4V328 841 aa22.04■■□□□ 1.12
SDCBP2-201ENST00000339987 CHD1LQ86WJ1 897 aa22.04■■□□□ 1.12
SDCBP2-201ENST00000339987 CLASRPQ8N2M8 674 aaKnown RBP22.04■■□□□ 1.12
SDCBP2-201ENST00000339987 HELBQ8NG08 1087 aaPredicted RBP22.04■■□□□ 1.12
SDCBP2-201ENST00000339987 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.04■■□□□ 1.12
SDCBP2-201ENST00000339987 LTBP1Q14766 1721 aa22.04■■□□□ 1.12
SDCBP2-201ENST00000339987 ZNF609O15014 1411 aa22.03■■□□□ 1.12
SDCBP2-201ENST00000339987 SMARCA5O60264 1052 aaPredicted RBP22.03■■□□□ 1.12
SDCBP2-201ENST00000339987 GPSM2P81274 684 aa22.03■■□□□ 1.12
SDCBP2-201ENST00000339987 PUM3Q15397 648 aaKnown RBP22.03■■□□□ 1.12
SDCBP2-201ENST00000339987 TNNI3KQ59H18 835 aa22.03■■□□□ 1.12
SDCBP2-201ENST00000339987 SOGA3Q5TF21 947 aa22.03■■□□□ 1.12
SDCBP2-201ENST00000339987 SLC51AQ86UW1 340 aa22.03■■□□□ 1.12
SDCBP2-201ENST00000339987 IL1RAPL2Q9NP60 686 aa22.03■■□□□ 1.12
SDCBP2-201ENST00000339987 FPGT-TNNI3KV9GXZ4 949 aa22.03■■□□□ 1.12
SDCBP2-201ENST00000339987 SNED1Q8TER0 1413 aa22.02■■□□□ 1.12
SDCBP2-201ENST00000339987 TAF5LO75529 589 aa22.02■■□□□ 1.12
SDCBP2-201ENST00000339987 FGFR2P21802 821 aa22.02■■□□□ 1.12
SDCBP2-201ENST00000339987 ANKIB1Q9P2G1 1089 aa22.02■■□□□ 1.12
SDCBP2-201ENST00000339987 LEMD3Q9Y2U8 911 aa22.02■■□□□ 1.12
SDCBP2-201ENST00000339987 C21orf2O43822 256 aa22.01■■□□□ 1.11
SDCBP2-201ENST00000339987 ATP2B4P23634 1241 aa22.01■■□□□ 1.11
SDCBP2-201ENST00000339987 UBE4AQ14139 1066 aa22.01■■□□□ 1.11
SDCBP2-201ENST00000339987 ATP2B3Q16720 1220 aa22.01■■□□□ 1.11
SDCBP2-201ENST00000339987 ARFGEF1Q9Y6D6 1849 aa22.01■■□□□ 1.11
SDCBP2-201ENST00000339987 CCDC93Q567U6 631 aa22■■□□□ 1.11
SDCBP2-201ENST00000339987 OLFM4Q6UX06 510 aa22■■□□□ 1.11
SDCBP2-201ENST00000339987 MPNDQ8N594 471 aa22■■□□□ 1.11
SDCBP2-201ENST00000339987 LPIN2Q92539 896 aa22■■□□□ 1.11
SDCBP2-201ENST00000339987 EAF2Q96CJ1 260 aaPredicted RBP22■■□□□ 1.11
SDCBP2-201ENST00000339987 LNPKQ9C0E8 428 aa22■■□□□ 1.11
SDCBP2-201ENST00000339987 NSFL1CQ9UNZ2 370 aaKnown RBP22■■□□□ 1.11
SDCBP2-201ENST00000339987 ZNF219Q9P2Y4 722 aaPredicted RBP21.99■■□□□ 1.11
SDCBP2-201ENST00000339987 GGA1Q9UJY5 639 aa21.99■■□□□ 1.11
SDCBP2-201ENST00000339987 BCS1LQ9Y276 419 aa21.99■■□□□ 1.11
SDCBP2-201ENST00000339987 DUOX1Q9NRD9 1551 aa21.99■■□□□ 1.11
SDCBP2-201ENST00000339987 ZNF804BA4D1E1 1349 aa21.99■■□□□ 1.11
SDCBP2-201ENST00000339987 ARAP2Q8WZ64 1704 aa21.99■■□□□ 1.11
SDCBP2-201ENST00000339987 A0A1B0GUL7 405 aa21.98■■□□□ 1.11
SDCBP2-201ENST00000339987 IFIT1P09914 478 aaKnown RBP21.98■■□□□ 1.11
SDCBP2-201ENST00000339987 SLC5A1P13866 664 aa21.98■■□□□ 1.11
SDCBP2-201ENST00000339987 DPP8Q6V1X1 898 aaPredicted RBP21.98■■□□□ 1.11
SDCBP2-201ENST00000339987 AACSQ86V21 672 aa21.98■■□□□ 1.11
SDCBP2-201ENST00000339987 RTKN2Q8IZC4 609 aa21.98■■□□□ 1.11
SDCBP2-201ENST00000339987 KCNJ4P48050 445 aa21.97■■□□□ 1.11
SDCBP2-201ENST00000339987 TBC1D16Q8TBP0 767 aa21.97■■□□□ 1.11
SDCBP2-201ENST00000339987 RTFDC1Q9BY42 306 aaPredicted RBP21.97■■□□□ 1.11
SDCBP2-201ENST00000339987 SNAP23O00161 211 aa21.97■■□□□ 1.11
SDCBP2-201ENST00000339987 UFL1O94874 794 aa21.97■■□□□ 1.11
SDCBP2-201ENST00000339987 IFIT2P09913 472 aaKnown RBP21.97■■□□□ 1.11
SDCBP2-201ENST00000339987 TIMM10P62072 90 aa21.97■■□□□ 1.11
SDCBP2-201ENST00000339987 C15orf52Q6ZUT6 534 aaKnown RBP21.97■■□□□ 1.11
SDCBP2-201ENST00000339987 POLLQ9UGP5 575 aa21.97■■□□□ 1.11
SDCBP2-201ENST00000339987 WWC3Q9ULE0 1092 aa21.97■■□□□ 1.11
SDCBP2-201ENST00000339987 NEUROD6Q96NK8 337 aa21.96■■□□□ 1.11
SDCBP2-201ENST00000339987 PSMD1Q99460 953 aa21.96■■□□□ 1.11
SDCBP2-201ENST00000339987 DBNLQ9UJU6 430 aaKnown RBP21.96■■□□□ 1.11
SDCBP2-201ENST00000339987 SALL3Q9BXA9 1300 aa21.95■■□□□ 1.11
SDCBP2-201ENST00000339987 IRS2Q9Y4H2 1338 aa21.95■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms