RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 VWDEQ8N2E2 1590 aa16.49■□□□□ 0.23
PCDH8-201ENST00000338862 SCRN1Q12765 414 aa16.48■□□□□ 0.23
PCDH8-201ENST00000338862 TOB2Q14106 344 aaPredicted RBP16.48■□□□□ 0.23
PCDH8-201ENST00000338862 KRT222Q8N1A0 295 aa16.48■□□□□ 0.23
PCDH8-201ENST00000338862 BBXQ8WY36 941 aaPredicted RBP16.48■□□□□ 0.23
PCDH8-201ENST00000338862 SPTLC3Q9NUV7 552 aa16.48■□□□□ 0.23
PCDH8-201ENST00000338862 OGFRQ9NZT2 677 aa16.48■□□□□ 0.23
PCDH8-201ENST00000338862 ORC3Q9UBD5 711 aaPredicted RBP16.48■□□□□ 0.23
PCDH8-201ENST00000338862 AOX1Q06278 1338 aa16.48■□□□□ 0.23
PCDH8-201ENST00000338862 PLEKHG3A1L390 1219 aa16.48■□□□□ 0.23
PCDH8-201ENST00000338862 IFIT1P09914 478 aaKnown RBP16.48■□□□□ 0.23
PCDH8-201ENST00000338862 GTPBP4Q9BZE4 634 aaKnown RBP16.48■□□□□ 0.23
PCDH8-201ENST00000338862 ARHGAP29Q52LW3 1261 aa16.48■□□□□ 0.23
PCDH8-201ENST00000338862 IGSF1Q8N6C5 1336 aa16.47■□□□□ 0.23
PCDH8-201ENST00000338862 CYP21A2P08686 494 aa16.47■□□□□ 0.23
PCDH8-201ENST00000338862 TRDNQ13061 729 aa16.47■□□□□ 0.23
PCDH8-201ENST00000338862 KLHL10Q6JEL2 608 aa16.47■□□□□ 0.23
PCDH8-201ENST00000338862 ANKRD13DQ6ZTN6 518 aa16.47■□□□□ 0.23
PCDH8-201ENST00000338862 CCDC34Q96HJ3 373 aa16.47■□□□□ 0.23
PCDH8-201ENST00000338862 MCMDC2Q4G0Z9 681 aa16.47■□□□□ 0.23
PCDH8-201ENST00000338862 EPHA10Q5JZY3 1008 aa16.47■□□□□ 0.23
PCDH8-201ENST00000338862 A0A0G2JLW4 131 aa16.47■□□□□ 0.23
PCDH8-201ENST00000338862 U3KPZ7 1027 aaPredicted RBP16.47■□□□□ 0.23
PCDH8-201ENST00000338862 ARHGEF28Q8N1W1 1705 aaKnown RBP16.46■□□□□ 0.23
PCDH8-201ENST00000338862 KLF18A0A0U1RQI7 1052 aa16.46■□□□□ 0.23
PCDH8-201ENST00000338862 TAF5LO75529 589 aa16.46■□□□□ 0.23
PCDH8-201ENST00000338862 CHRNA2Q15822 529 aa16.46■□□□□ 0.23
PCDH8-201ENST00000338862 ANKRD24Q8TF21 1146 aa16.46■□□□□ 0.23
PCDH8-201ENST00000338862 SLU7O95391 586 aaKnown RBP16.46■□□□□ 0.23
PCDH8-201ENST00000338862 TM6SF1Q9BZW5 370 aa16.46■□□□□ 0.23
PCDH8-201ENST00000338862 XPO4Q9C0E2 1151 aaKnown RBP16.46■□□□□ 0.23
PCDH8-201ENST00000338862 DBNLQ9UJU6 430 aaKnown RBP16.46■□□□□ 0.23
PCDH8-201ENST00000338862 PPLO60437 1756 aa16.46■□□□□ 0.23
PCDH8-201ENST00000338862 MICU3Q86XE3 530 aa16.46■□□□□ 0.23
PCDH8-201ENST00000338862 UTP14AQ9BVJ6 771 aaKnown RBP16.46■□□□□ 0.23
PCDH8-201ENST00000338862 DEPDC5O75140 1603 aa16.45■□□□□ 0.22
PCDH8-201ENST00000338862 MRPS27Q92552 414 aaKnown RBP16.45■□□□□ 0.22
PCDH8-201ENST00000338862 FUCA2Q9BTY2 467 aa16.45■□□□□ 0.22
PCDH8-201ENST00000338862 EPC1Q9H2F5 836 aa16.45■□□□□ 0.22
PCDH8-201ENST00000338862 ZSCAN16Q9H4T2 348 aaPredicted RBP16.45■□□□□ 0.22
PCDH8-201ENST00000338862 TTC21AQ8NDW8 1320 aa16.45■□□□□ 0.22
PCDH8-201ENST00000338862 RNMTO43148 476 aaKnown RBP16.45■□□□□ 0.22
PCDH8-201ENST00000338862 GIGYF1O75420 1035 aaPredicted RBP16.45■□□□□ 0.22
PCDH8-201ENST00000338862 IDH1O75874 414 aaKnown RBP16.45■□□□□ 0.22
PCDH8-201ENST00000338862 TRIM29Q14134 588 aa16.45■□□□□ 0.22
PCDH8-201ENST00000338862 TTC39AQ5SRH9 613 aa16.44■□□□□ 0.22
PCDH8-201ENST00000338862 OLFM4Q6UX06 510 aa16.44■□□□□ 0.22
PCDH8-201ENST00000338862 ALDH1L1O75891 902 aa16.44■□□□□ 0.22
PCDH8-201ENST00000338862 DPCR1Q3MIW9 517 aa16.44■□□□□ 0.22
PCDH8-201ENST00000338862 CABLES1Q8TDN4 633 aa16.44■□□□□ 0.22
PCDH8-201ENST00000338862 GOLPH3LQ9H4A5 285 aa16.44■□□□□ 0.22
PCDH8-201ENST00000338862 RNF216Q9NWF9 866 aaPredicted RBP16.44■□□□□ 0.22
PCDH8-201ENST00000338862 HMG20BQ9P0W2 317 aa16.44■□□□□ 0.22
PCDH8-201ENST00000338862 ARHGEF10O15013 1369 aa16.44■□□□□ 0.22
PCDH8-201ENST00000338862 TNNI3KQ59H18 835 aa16.44■□□□□ 0.22
PCDH8-201ENST00000338862 ARGLU1Q9NWB6 273 aaPredicted RBP16.44■□□□□ 0.22
PCDH8-201ENST00000338862 FPGT-TNNI3KV9GXZ4 949 aa16.44■□□□□ 0.22
PCDH8-201ENST00000338862 TMCO3Q6UWJ1 677 aa16.43■□□□□ 0.22
PCDH8-201ENST00000338862 DHX32Q7L7V1 743 aaKnown RBP16.43■□□□□ 0.22
PCDH8-201ENST00000338862 NOL10Q9BSC4 688 aaKnown RBP16.43■□□□□ 0.22
PCDH8-201ENST00000338862 PIK3C2BO00750 1634 aa16.43■□□□□ 0.22
PCDH8-201ENST00000338862 USP6P35125 1406 aa16.43■□□□□ 0.22
PCDH8-201ENST00000338862 UBASH3AP57075 661 aa16.43■□□□□ 0.22
PCDH8-201ENST00000338862 AKAP4Q5JQC9 854 aa16.43■□□□□ 0.22
PCDH8-201ENST00000338862 TNRQ92752 1358 aa16.43■□□□□ 0.22
PCDH8-201ENST00000338862 NDUFA8P51970 172 aa16.43■□□□□ 0.22
PCDH8-201ENST00000338862 GNG11P61952 73 aa16.43■□□□□ 0.22
PCDH8-201ENST00000338862 KARSQ15046 597 aaKnown RBP16.43■□□□□ 0.22
PCDH8-201ENST00000338862 FBXO38Q6PIJ6 1188 aa16.43■□□□□ 0.22
PCDH8-201ENST00000338862 ZNF397Q8NF99 534 aaPredicted RBP16.43■□□□□ 0.22
PCDH8-201ENST00000338862 MTMR7Q9Y216 660 aa16.43■□□□□ 0.22
PCDH8-201ENST00000338862 HECW2Q9P2P5 1572 aa16.42■□□□□ 0.22
PCDH8-201ENST00000338862 TULP1O00294 542 aaPredicted RBP16.42■□□□□ 0.22
PCDH8-201ENST00000338862 FEZ1Q99689 392 aa16.42■□□□□ 0.22
PCDH8-201ENST00000338862 CCDC66A2RUB6 948 aa16.42■□□□□ 0.22
PCDH8-201ENST00000338862 FAM160A1Q05DH4 1040 aa16.42■□□□□ 0.22
PCDH8-201ENST00000338862 MYL10Q9BUA6 226 aa16.42■□□□□ 0.22
PCDH8-201ENST00000338862 CLIC4Q9Y696 253 aa16.42■□□□□ 0.22
PCDH8-201ENST00000338862 TOP1P11387 765 aaKnown RBP16.42■□□□□ 0.22
PCDH8-201ENST00000338862 CABP4P57796 275 aa16.42■□□□□ 0.22
PCDH8-201ENST00000338862 TDRD7Q8NHU6 1098 aaKnown RBP16.42■□□□□ 0.22
PCDH8-201ENST00000338862 CEP126Q9P2H0 1117 aa16.42■□□□□ 0.22
PCDH8-201ENST00000338862 PCDHA7Q9UN72 937 aa16.42■□□□□ 0.22
PCDH8-201ENST00000338862 CTAGE5O15320 804 aa16.41■□□□□ 0.22
PCDH8-201ENST00000338862 KMT5BQ4FZB7 885 aa16.41■□□□□ 0.22
PCDH8-201ENST00000338862 NUP133Q8WUM0 1156 aa16.41■□□□□ 0.22
PCDH8-201ENST00000338862 PAG1Q9NWQ8 432 aa16.41■□□□□ 0.22
PCDH8-201ENST00000338862 SPTLC2O15270 562 aa16.41■□□□□ 0.22
PCDH8-201ENST00000338862 KNDC1Q76NI1 1749 aa16.41■□□□□ 0.22
PCDH8-201ENST00000338862 ORAI2Q96SN7 254 aa16.41■□□□□ 0.22
PCDH8-201ENST00000338862 CARD6Q9BX69 1037 aa16.41■□□□□ 0.22
PCDH8-201ENST00000338862 LMTK2Q8IWU2 1503 aa16.41■□□□□ 0.22
PCDH8-201ENST00000338862 CPLX2Q6PUV4 134 aaKnown RBP16.41■□□□□ 0.22
PCDH8-201ENST00000338862 ATP1A3P13637 1013 aa16.4■□□□□ 0.22
PCDH8-201ENST00000338862 RESTQ13127 1097 aa16.4■□□□□ 0.22
PCDH8-201ENST00000338862 PLCD3Q8N3E9 789 aa16.4■□□□□ 0.22
PCDH8-201ENST00000338862 ZNF496Q96IT1 587 aaPredicted RBP16.4■□□□□ 0.22
PCDH8-201ENST00000338862 SEC31AO94979 1220 aaKnown RBP16.4■□□□□ 0.22
PCDH8-201ENST00000338862 GCKRQ14397 625 aa16.4■□□□□ 0.22
PCDH8-201ENST00000338862 DDX17Q92841 729 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms