RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 TAOK3Q9H2K8 898 aa14.81□□□□□ -0.04
SPTLC1-202ENST00000337841 COPRSQ9NQ92 184 aa14.81□□□□□ -0.04
SPTLC1-202ENST00000337841 PNMA6EA0A0J9YXQ4 647 aa14.8□□□□□ -0.04
SPTLC1-202ENST00000337841 C6orf229H3BNL8 230 aa14.8□□□□□ -0.04
SPTLC1-202ENST00000337841 EYA2O00167 538 aa14.8□□□□□ -0.04
SPTLC1-202ENST00000337841 ATP2B4P23634 1241 aa14.8□□□□□ -0.04
SPTLC1-202ENST00000337841 GPSM2P81274 684 aa14.8□□□□□ -0.04
SPTLC1-202ENST00000337841 G3BP1Q13283 466 aaKnown RBP eCLIP14.8□□□□□ -0.04
SPTLC1-202ENST00000337841 CEP85Q6P2H3 762 aa14.8□□□□□ -0.04
SPTLC1-202ENST00000337841 KLHDC4Q8TBB5 520 aa14.8□□□□□ -0.04
SPTLC1-202ENST00000337841 SSH3Q8TE77 659 aa14.8□□□□□ -0.04
SPTLC1-202ENST00000337841 PSMD1Q99460 953 aa14.8□□□□□ -0.04
SPTLC1-202ENST00000337841 VPS33BQ9H267 617 aa14.8□□□□□ -0.04
SPTLC1-202ENST00000337841 PODXL2Q9NZ53 605 aa14.8□□□□□ -0.04
SPTLC1-202ENST00000337841 GGA1Q9UJY5 639 aa14.8□□□□□ -0.04
SPTLC1-202ENST00000337841 RIPOR2Q9Y4F9 1068 aa14.8□□□□□ -0.04
SPTLC1-202ENST00000337841 DDX60Q8IY21 1712 aaKnown RBP14.8□□□□□ -0.04
SPTLC1-202ENST00000337841 CIAO1O76071 339 aa14.79□□□□□ -0.04
SPTLC1-202ENST00000337841 XDHP47989 1333 aa14.79□□□□□ -0.04
SPTLC1-202ENST00000337841 CHRNDQ07001 517 aa14.79□□□□□ -0.04
SPTLC1-202ENST00000337841 POLA2Q14181 598 aa14.79□□□□□ -0.04
SPTLC1-202ENST00000337841 MROH5Q6ZUA9 1318 aa14.79□□□□□ -0.04
SPTLC1-202ENST00000337841 EYA3Q99504 573 aa14.79□□□□□ -0.04
SPTLC1-202ENST00000337841 RTFDC1Q9BY42 306 aaPredicted RBP14.79□□□□□ -0.04
SPTLC1-202ENST00000337841 PUS3Q9BZE2 481 aaKnown RBP14.79□□□□□ -0.04
SPTLC1-202ENST00000337841 LTBP3Q9NS15 1303 aa14.79□□□□□ -0.04
SPTLC1-202ENST00000337841 LEMD3Q9Y2U8 911 aa14.79□□□□□ -0.04
SPTLC1-202ENST00000337841 KIAA1551Q9HCM1 1747 aa14.78□□□□□ -0.04
SPTLC1-202ENST00000337841 NFKBIEO00221 500 aa14.78□□□□□ -0.04
SPTLC1-202ENST00000337841 SURF6O75683 361 aaKnown RBP14.78□□□□□ -0.04
SPTLC1-202ENST00000337841 LMNB1P20700 586 aa14.78□□□□□ -0.04
SPTLC1-202ENST00000337841 IL15P40933 162 aaPredicted RBP14.78□□□□□ -0.04
SPTLC1-202ENST00000337841 KCNJ4P48050 445 aa14.78□□□□□ -0.04
SPTLC1-202ENST00000337841 LRRC24Q50LG9 513 aa14.78□□□□□ -0.04
SPTLC1-202ENST00000337841 METTL24Q5JXM2 366 aa14.78□□□□□ -0.04
SPTLC1-202ENST00000337841 EXOC6Q8TAG9 804 aa14.78□□□□□ -0.04
SPTLC1-202ENST00000337841 ZC3H12CQ9C0D7 883 aaKnown RBP14.78□□□□□ -0.04
SPTLC1-202ENST00000337841 SIL1Q9H173 461 aa14.78□□□□□ -0.04
SPTLC1-202ENST00000337841 CEP126Q9P2H0 1117 aa14.78□□□□□ -0.04
SPTLC1-202ENST00000337841 PA2G4Q9UQ80 394 aaKnown RBP14.78□□□□□ -0.04
SPTLC1-202ENST00000337841 UFL1O94874 794 aa14.77□□□□□ -0.05
SPTLC1-202ENST00000337841 OS9Q13438 667 aaPredicted RBP14.77□□□□□ -0.05
SPTLC1-202ENST00000337841 WASHC4Q2M389 1173 aa14.77□□□□□ -0.05
SPTLC1-202ENST00000337841 HSP90AB4PQ58FF6 505 aa14.77□□□□□ -0.05
SPTLC1-202ENST00000337841 HELBQ8NG08 1087 aaPredicted RBP14.77□□□□□ -0.05
SPTLC1-202ENST00000337841 TBC1D16Q8TBP0 767 aa14.77□□□□□ -0.05
SPTLC1-202ENST00000337841 COL11A2P13942 1736 aaPredicted RBP14.77□□□□□ -0.05
SPTLC1-202ENST00000337841 SLX4Q8IY92 1834 aa14.76□□□□□ -0.05
SPTLC1-202ENST00000337841 LAMB2P55268 1798 aa14.76□□□□□ -0.05
SPTLC1-202ENST00000337841 G3V3G9 751 aa14.76□□□□□ -0.05
SPTLC1-202ENST00000337841 TAF5LO75529 589 aa14.76□□□□□ -0.05
SPTLC1-202ENST00000337841 IRX6P78412 446 aaPredicted RBP14.76□□□□□ -0.05
SPTLC1-202ENST00000337841 RASSF7Q02833 373 aa14.76□□□□□ -0.05
SPTLC1-202ENST00000337841 DCAF8Q5TAQ9 597 aa14.76□□□□□ -0.05
SPTLC1-202ENST00000337841 ZNF277Q9NRM2 450 aaPredicted RBP14.76□□□□□ -0.05
SPTLC1-202ENST00000337841 POLLQ9UGP5 575 aa14.76□□□□□ -0.05
SPTLC1-202ENST00000337841 NOP58Q9Y2X3 529 aaKnown RBP14.76□□□□□ -0.05
SPTLC1-202ENST00000337841 ZNF804BA4D1E1 1349 aa14.75□□□□□ -0.05
SPTLC1-202ENST00000337841 PPIP5K2O43314 1243 aa14.75□□□□□ -0.05
SPTLC1-202ENST00000337841 PDE8BO95263 885 aa14.75□□□□□ -0.05
SPTLC1-202ENST00000337841 NEFLP07196 543 aa14.75□□□□□ -0.05
SPTLC1-202ENST00000337841 IARSP41252 1262 aaKnown RBP14.75□□□□□ -0.05
SPTLC1-202ENST00000337841 UBE4AQ14139 1066 aa14.75□□□□□ -0.05
SPTLC1-202ENST00000337841 C9orf131Q5VYM1 1079 aa14.75□□□□□ -0.05
SPTLC1-202ENST00000337841 ATG9AQ7Z3C6 839 aa14.75□□□□□ -0.05
SPTLC1-202ENST00000337841 SLC51AQ86UW1 340 aa14.75□□□□□ -0.05
SPTLC1-202ENST00000337841 LARGE2Q8N3Y3 721 aa14.75□□□□□ -0.05
SPTLC1-202ENST00000337841 JDP2Q8WYK2 163 aa14.75□□□□□ -0.05
SPTLC1-202ENST00000337841 RNF181Q9P0P0 153 aa14.75□□□□□ -0.05
SPTLC1-202ENST00000337841 SRCAPQ6ZRS2 3230 aa14.74□□□□□ -0.05
SPTLC1-202ENST00000337841 RIMBP2O15034 1052 aa14.74□□□□□ -0.05
SPTLC1-202ENST00000337841 SIRT2Q8IXJ6 389 aa14.74□□□□□ -0.05
SPTLC1-202ENST00000337841 AKAP2Q9Y2D5 859 aa14.74□□□□□ -0.05
SPTLC1-202ENST00000337841 PCDHB15Q9Y5E8 787 aa14.74□□□□□ -0.05
SPTLC1-202ENST00000337841 DLEC1Q9Y238 1755 aa14.74□□□□□ -0.05
SPTLC1-202ENST00000337841 KIAA2012Q0VF49 1180 aa14.73□□□□□ -0.05
SPTLC1-202ENST00000337841 ERC1Q8IUD2 1116 aa14.73□□□□□ -0.05
SPTLC1-202ENST00000337841 NIM1KQ8IY84 436 aa14.73□□□□□ -0.05
SPTLC1-202ENST00000337841 RAB11FIP3O75154 756 aa14.72□□□□□ -0.05
SPTLC1-202ENST00000337841 IFIT1P09914 478 aaKnown RBP14.72□□□□□ -0.05
SPTLC1-202ENST00000337841 C1QBPQ07021 282 aaKnown RBP14.72□□□□□ -0.05
SPTLC1-202ENST00000337841 PUM3Q15397 648 aaKnown RBP14.72□□□□□ -0.05
SPTLC1-202ENST00000337841 AOC3Q16853 763 aa14.72□□□□□ -0.05
SPTLC1-202ENST00000337841 RWDD1Q9H446 243 aaPredicted RBP14.72□□□□□ -0.05
SPTLC1-202ENST00000337841 MYH3P11055 1940 aa14.71□□□□□ -0.05
SPTLC1-202ENST00000337841 SLC5A1P13866 664 aa14.71□□□□□ -0.05
SPTLC1-202ENST00000337841 TFCP2Q12800 502 aa14.71□□□□□ -0.05
SPTLC1-202ENST00000337841 C15orf52Q6ZUT6 534 aaKnown RBP14.71□□□□□ -0.05
SPTLC1-202ENST00000337841 LPIN2Q92539 896 aa14.71□□□□□ -0.05
SPTLC1-202ENST00000337841 EXOC6BQ9Y2D4 811 aa14.71□□□□□ -0.05
SPTLC1-202ENST00000337841 BRCA1P38398 1863 aaKnown RBP14.71□□□□□ -0.05
SPTLC1-202ENST00000337841 SNED1Q8TER0 1413 aa14.7□□□□□ -0.06
SPTLC1-202ENST00000337841 WTIPA6NIX2 430 aaPredicted RBP14.7□□□□□ -0.06
SPTLC1-202ENST00000337841 SNAP23O00161 211 aa14.7□□□□□ -0.06
SPTLC1-202ENST00000337841 SASH1O94885 1247 aa14.7□□□□□ -0.06
SPTLC1-202ENST00000337841 PRELPP51888 382 aa14.7□□□□□ -0.06
SPTLC1-202ENST00000337841 EIF6P56537 245 aaKnown RBP14.7□□□□□ -0.06
SPTLC1-202ENST00000337841 ATP2B3Q16720 1220 aa14.7□□□□□ -0.06
SPTLC1-202ENST00000337841 DOK7Q18PE1 504 aa14.7□□□□□ -0.06
SPTLC1-202ENST00000337841 CAVIN4Q5BKX8 364 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms