RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 STX1AQ16623 288 aa12.04□□□□□ -0.48
CLN8-201ENST00000331222 FBF1Q8TES7 1133 aa12.04□□□□□ -0.48
CLN8-201ENST00000331222 SMARCC1Q92922 1105 aaPredicted RBP12.04□□□□□ -0.48
CLN8-201ENST00000331222 CCDC6Q16204 474 aa12.04□□□□□ -0.48
CLN8-201ENST00000331222 DCAF17Q5H9S7 520 aaPredicted RBP12.04□□□□□ -0.48
CLN8-201ENST00000331222 SPOUT1Q5T280 376 aaKnown RBP12.04□□□□□ -0.48
CLN8-201ENST00000331222 CCDC24Q8N4L8 307 aa12.04□□□□□ -0.48
CLN8-201ENST00000331222 ALG1Q9BT22 464 aa12.04□□□□□ -0.48
CLN8-201ENST00000331222 EPRSP07814 1512 aaKnown RBP12.04□□□□□ -0.48
CLN8-201ENST00000331222 CHMP2AO43633 222 aa12.04□□□□□ -0.48
CLN8-201ENST00000331222 UBASH3AP57075 661 aa12.04□□□□□ -0.48
CLN8-201ENST00000331222 FAM160A1Q05DH4 1040 aa12.04□□□□□ -0.48
CLN8-201ENST00000331222 DHX58Q96C10 678 aa12.03□□□□□ -0.48
CLN8-201ENST00000331222 DDX39AO00148 427 aaKnown RBP12.03□□□□□ -0.48
CLN8-201ENST00000331222 BACH1O14867 736 aa12.03□□□□□ -0.48
CLN8-201ENST00000331222 DBF4Q9UBU7 674 aaPredicted RBP12.03□□□□□ -0.48
CLN8-201ENST00000331222 SYKP43405 635 aa12.03□□□□□ -0.48
CLN8-201ENST00000331222 TPD52P55327 224 aaPredicted RBP12.03□□□□□ -0.48
CLN8-201ENST00000331222 GNG11P61952 73 aa12.03□□□□□ -0.48
CLN8-201ENST00000331222 GABPAQ06546 454 aa12.03□□□□□ -0.48
CLN8-201ENST00000331222 PKNOX2Q96KN3 472 aa12.03□□□□□ -0.48
CLN8-201ENST00000331222 NAA16Q6N069 864 aaPredicted RBP12.03□□□□□ -0.48
CLN8-201ENST00000331222 STAC3Q96MF2 364 aa12.03□□□□□ -0.48
CLN8-201ENST00000331222 MAK16Q9BXY0 300 aaKnown RBP12.03□□□□□ -0.48
CLN8-201ENST00000331222 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.03□□□□□ -0.48
CLN8-201ENST00000331222 ASIC1P78348 528 aa12.03□□□□□ -0.48
CLN8-201ENST00000331222 SF3A3Q12874 501 aaKnown RBP eCLIP12.03□□□□□ -0.48
CLN8-201ENST00000331222 PPP1R21Q6ZMI0 780 aa12.03□□□□□ -0.48
CLN8-201ENST00000331222 FAM114A1Q8IWE2 563 aa12.03□□□□□ -0.48
CLN8-201ENST00000331222 RNF34Q969K3 372 aa12.03□□□□□ -0.48
CLN8-201ENST00000331222 PPANQ9NQ55 473 aaKnown RBP12.03□□□□□ -0.48
CLN8-201ENST00000331222 NSFL1CQ9UNZ2 370 aaKnown RBP12.03□□□□□ -0.48
CLN8-201ENST00000331222 ERCC3P19447 782 aa12.03□□□□□ -0.48
CLN8-201ENST00000331222 RTN1Q16799 776 aa12.03□□□□□ -0.48
CLN8-201ENST00000331222 PPP4R3BQ5MIZ7 849 aa12.03□□□□□ -0.48
CLN8-201ENST00000331222 WDR97A6NE52 1622 aa12.02□□□□□ -0.48
CLN8-201ENST00000331222 SPDYE3A6NKU9 549 aa12.02□□□□□ -0.48
CLN8-201ENST00000331222 MAP7D1Q3KQU3 841 aa12.02□□□□□ -0.48
CLN8-201ENST00000331222 SCAND2PQ9GZW5 306 aaPredicted RBP12.02□□□□□ -0.48
CLN8-201ENST00000331222 SLC52A1Q9NWF4 448 aa12.02□□□□□ -0.48
CLN8-201ENST00000331222 LDHCP07864 332 aa12.02□□□□□ -0.49
CLN8-201ENST00000331222 MCM3P25205 808 aa12.02□□□□□ -0.49
CLN8-201ENST00000331222 STX17P56962 302 aa12.02□□□□□ -0.49
CLN8-201ENST00000331222 GSTO1P78417 241 aa12.02□□□□□ -0.49
CLN8-201ENST00000331222 SLFN5Q08AF3 891 aa12.02□□□□□ -0.49
CLN8-201ENST00000331222 SMC1BQ8NDV3 1235 aa12.02□□□□□ -0.49
CLN8-201ENST00000331222 SPAG5Q96R06 1193 aa12.02□□□□□ -0.49
CLN8-201ENST00000331222 PFDN4Q9NQP4 134 aa12.02□□□□□ -0.49
CLN8-201ENST00000331222 PARP3Q9Y6F1 533 aa12.02□□□□□ -0.49
CLN8-201ENST00000331222 MAGEB6P1A0A0J9YX57 407 aa12.02□□□□□ -0.49
CLN8-201ENST00000331222 ZBTB16Q05516 673 aa12.02□□□□□ -0.49
CLN8-201ENST00000331222 Q6ZUG5 572 aa12.02□□□□□ -0.49
CLN8-201ENST00000331222 CEP112Q8N8E3 955 aa12.02□□□□□ -0.49
CLN8-201ENST00000331222 LRRC45Q96CN5 670 aa12.02□□□□□ -0.49
CLN8-201ENST00000331222 AKR1B10O60218 316 aa12.02□□□□□ -0.49
CLN8-201ENST00000331222 LMOD1P29536 600 aaPredicted RBP12.02□□□□□ -0.49
CLN8-201ENST00000331222 CEP135Q66GS9 1140 aa12.02□□□□□ -0.49
CLN8-201ENST00000331222 SPATA24Q86W54 205 aa12.02□□□□□ -0.49
CLN8-201ENST00000331222 CCDC155Q8N6L0 562 aa12.02□□□□□ -0.49
CLN8-201ENST00000331222 SREK1Q8WXA9 508 aaKnown RBP12.02□□□□□ -0.49
CLN8-201ENST00000331222 BIRC2Q13490 618 aa12.01□□□□□ -0.49
CLN8-201ENST00000331222 CNPY2Q9Y2B0 182 aa12.01□□□□□ -0.49
CLN8-201ENST00000331222 RNASE9P60153 205 aaKnown RBP12.01□□□□□ -0.49
CLN8-201ENST00000331222 GPCPD1Q9NPB8 672 aa12.01□□□□□ -0.49
CLN8-201ENST00000331222 CGNQ9P2M7 1197 aaKnown RBP12.01□□□□□ -0.49
CLN8-201ENST00000331222 NOD1Q9Y239 953 aa12.01□□□□□ -0.49
CLN8-201ENST00000331222 ZBTB43O43298 467 aa12.01□□□□□ -0.49
CLN8-201ENST00000331222 KIF4AO95239 1232 aa12.01□□□□□ -0.49
CLN8-201ENST00000331222 TNNI2P48788 182 aa12.01□□□□□ -0.49
CLN8-201ENST00000331222 TBC1D9Q6ZT07 1266 aa12.01□□□□□ -0.49
CLN8-201ENST00000331222 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.01□□□□□ -0.49
CLN8-201ENST00000331222 TTLL3Q9Y4R7 772 aa12.01□□□□□ -0.49
CLN8-201ENST00000331222 V9GYY5 206 aaPredicted RBP12.01□□□□□ -0.49
CLN8-201ENST00000331222 MCM6Q14566 821 aa12.01□□□□□ -0.49
CLN8-201ENST00000331222 IMPG2Q9BZV3 1241 aa12.01□□□□□ -0.49
CLN8-201ENST00000331222 SH2B1Q9NRF2 756 aaPredicted RBP12.01□□□□□ -0.49
CLN8-201ENST00000331222 PA2G4Q9UQ80 394 aaKnown RBP12.01□□□□□ -0.49
CLN8-201ENST00000331222 ATAD2Q6PL18 1390 aa12.01□□□□□ -0.49
CLN8-201ENST00000331222 TNPO1Q92973 898 aaKnown RBP12.01□□□□□ -0.49
CLN8-201ENST00000331222 ANO3Q9BYT9 981 aa12.01□□□□□ -0.49
CLN8-201ENST00000331222 ZHX1Q9UKY1 873 aaPredicted RBP12.01□□□□□ -0.49
CLN8-201ENST00000331222 MCM5P33992 734 aa12.01□□□□□ -0.49
CLN8-201ENST00000331222 SNX16P57768 344 aa12.01□□□□□ -0.49
CLN8-201ENST00000331222 HGSO14964 777 aaPredicted RBP12□□□□□ -0.49
CLN8-201ENST00000331222 MCM9Q9NXL9 1143 aa12□□□□□ -0.49
CLN8-201ENST00000331222 ANO6Q4KMQ2 910 aa12□□□□□ -0.49
CLN8-201ENST00000331222 EAPPQ56P03 285 aaPredicted RBP12□□□□□ -0.49
CLN8-201ENST00000331222 C6orf163Q5TEZ5 329 aa12□□□□□ -0.49
CLN8-201ENST00000331222 IFNL2Q8IZJ0 200 aa12□□□□□ -0.49
CLN8-201ENST00000331222 ERMNQ8TAM6 284 aa12□□□□□ -0.49
CLN8-201ENST00000331222 ZNF526Q8TF50 670 aaPredicted RBP12□□□□□ -0.49
CLN8-201ENST00000331222 IFT81Q8WYA0 676 aa12□□□□□ -0.49
CLN8-201ENST00000331222 TTC36A6NLP5 189 aa12□□□□□ -0.49
CLN8-201ENST00000331222 TRAF3IP1Q8TDR0 691 aaPredicted RBP12□□□□□ -0.49
CLN8-201ENST00000331222 TXNDC16Q9P2K2 825 aa12□□□□□ -0.49
CLN8-201ENST00000331222 FAM135AQ9P2D6 1515 aa12□□□□□ -0.49
CLN8-201ENST00000331222 CRCPO75575 148 aa12□□□□□ -0.49
CLN8-201ENST00000331222 NOP9Q86U38 636 aaKnown RBP12□□□□□ -0.49
CLN8-201ENST00000331222 XAGE3Q8WTP9 111 aa12□□□□□ -0.49
CLN8-201ENST00000331222 KCNK9Q9NPC2 374 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms