RNA–Protein interactions for RNA: ENST00000329151.5

TMEM54-201, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best) BASIC

Gene TMEM54, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-201ENST00000329151 UFL1O94874 794 aa29.98■■■□□ 2.39
TMEM54-201ENST00000329151 RPS12P25398 132 aaKnown RBP29.98■■■□□ 2.39
TMEM54-201ENST00000329151 TBC1D16Q8TBP0 767 aa29.98■■■□□ 2.39
TMEM54-201ENST00000329151 METTL22Q9BUU2 404 aaPredicted RBP29.98■■■□□ 2.39
TMEM54-201ENST00000329151 GGA1Q9UJY5 639 aa29.98■■■□□ 2.39
TMEM54-201ENST00000329151 CCDC85AQ96PX6 553 aaPredicted RBP29.97■■■□□ 2.39
TMEM54-201ENST00000329151 SEC31BQ9NQW1 1179 aa29.97■■■□□ 2.39
TMEM54-201ENST00000329151 PGAP2Q9UHJ9 254 aa29.97■■■□□ 2.39
TMEM54-201ENST00000329151 MAP3K2Q9Y2U5 619 aa29.96■■■□□ 2.39
TMEM54-201ENST00000329151 HSPA8P11142 646 aaKnown RBP29.95■■■□□ 2.39
TMEM54-201ENST00000329151 HIRAP54198 1017 aaPredicted RBP29.95■■■□□ 2.39
TMEM54-201ENST00000329151 TBC1D10BQ4KMP7 808 aaPredicted RBP29.95■■■□□ 2.39
TMEM54-201ENST00000329151 ANKRD18AQ8IVF6 992 aa29.95■■■□□ 2.39
TMEM54-201ENST00000329151 MAP2K2P36507 400 aa29.94■■■□□ 2.38
TMEM54-201ENST00000329151 RBM26Q5T8P6 1007 aaKnown RBP29.94■■■□□ 2.38
TMEM54-201ENST00000329151 SAMD7Q7Z3H4 446 aa29.94■■■□□ 2.38
TMEM54-201ENST00000329151 SAPCD2Q86UD0 394 aa29.94■■■□□ 2.38
TMEM54-201ENST00000329151 JARID2Q92833 1246 aaPredicted RBP29.94■■■□□ 2.38
TMEM54-201ENST00000329151 THSD7BQ9C0I4 1608 aa29.93■■■□□ 2.38
TMEM54-201ENST00000329151 SHTN1A0MZ66 631 aa29.93■■■□□ 2.38
TMEM54-201ENST00000329151 USP48Q86UV5 1035 aa29.93■■■□□ 2.38
TMEM54-201ENST00000329151 DCPSQ96C86 337 aaKnown RBP29.93■■■□□ 2.38
TMEM54-201ENST00000329151 PODXL2Q9NZ53 605 aa29.93■■■□□ 2.38
TMEM54-201ENST00000329151 POLR2AP24928 1970 aaKnown RBP29.93■■■□□ 2.38
TMEM54-201ENST00000329151 MYH3P11055 1940 aa29.92■■■□□ 2.38
TMEM54-201ENST00000329151 KSR2Q6VAB6 950 aa29.92■■■□□ 2.38
TMEM54-201ENST00000329151 TSR2Q969E8 191 aaKnown RBP29.92■■■□□ 2.38
TMEM54-201ENST00000329151 CDC5LQ99459 802 aaKnown RBP29.92■■■□□ 2.38
TMEM54-201ENST00000329151 KRT26Q7Z3Y9 468 aa29.91■■■□□ 2.38
TMEM54-201ENST00000329151 HHIPL1Q96JK4 782 aa29.91■■■□□ 2.38
TMEM54-201ENST00000329151 COL4A1P02462 1669 aa29.91■■■□□ 2.38
TMEM54-201ENST00000329151 XDHP47989 1333 aa29.91■■■□□ 2.38
TMEM54-201ENST00000329151 PI4KAP2A4QPH2 592 aa29.9■■■□□ 2.38
TMEM54-201ENST00000329151 AOC2O75106 756 aa29.9■■■□□ 2.38
TMEM54-201ENST00000329151 PI4KAP1Q8N8J0 262 aa29.9■■■□□ 2.38
TMEM54-201ENST00000329151 TWISTNBQ3B726 338 aaPredicted RBP29.89■■■□□ 2.38
TMEM54-201ENST00000329151 TSPYL6Q8N831 410 aa29.89■■■□□ 2.38
TMEM54-201ENST00000329151 ZEB1P37275 1124 aaPredicted RBP29.88■■■□□ 2.37
TMEM54-201ENST00000329151 CTSWP56202 376 aa29.88■■■□□ 2.37
TMEM54-201ENST00000329151 CCDC27Q2M243 656 aa29.88■■■□□ 2.37
TMEM54-201ENST00000329151 KIF4BQ2VIQ3 1234 aa29.88■■■□□ 2.37
TMEM54-201ENST00000329151 KCNQ5Q9NR82 932 aa29.88■■■□□ 2.37
TMEM54-201ENST00000329151 HUNKP57058 714 aa29.87■■■□□ 2.37
TMEM54-201ENST00000329151 RTL9Q8NET4 1388 aa29.87■■■□□ 2.37
TMEM54-201ENST00000329151 SCN9AQ15858 1988 aa29.86■■■□□ 2.37
TMEM54-201ENST00000329151 CA12O43570 354 aa29.86■■■□□ 2.37
TMEM54-201ENST00000329151 ATP2B4P23634 1241 aa29.86■■■□□ 2.37
TMEM54-201ENST00000329151 SULF1Q8IWU6 871 aa29.86■■■□□ 2.37
TMEM54-201ENST00000329151 C2orf69Q8N8R5 385 aa29.86■■■□□ 2.37
TMEM54-201ENST00000329151 SPEF2Q9C093 1822 aa29.86■■■□□ 2.37
TMEM54-201ENST00000329151 VIL1P09327 827 aaKnown RBP29.85■■■□□ 2.37
TMEM54-201ENST00000329151 WWC1Q8IX03 1113 aa29.85■■■□□ 2.37
TMEM54-201ENST00000329151 SLC4A2P04920 1241 aa29.84■■■□□ 2.37
TMEM54-201ENST00000329151 MRS2Q9HD23 443 aa29.84■■■□□ 2.37
TMEM54-201ENST00000329151 CACNA1FO60840 1977 aa29.84■■■□□ 2.37
TMEM54-201ENST00000329151 NOGQ13253 232 aa29.83■■■□□ 2.37
TMEM54-201ENST00000329151 GBA2Q9HCG7 927 aaPredicted RBP29.83■■■□□ 2.37
TMEM54-201ENST00000329151 IL16Q14005 1332 aa29.82■■■□□ 2.36
TMEM54-201ENST00000329151 IGKV5-2P06315 115 aa29.82■■■□□ 2.36
TMEM54-201ENST00000329151 BRPF1P55201 1214 aaPredicted RBP29.82■■■□□ 2.36
TMEM54-201ENST00000329151 RSBN1LQ6PCB5 846 aaPredicted RBP29.82■■■□□ 2.36
TMEM54-201ENST00000329151 AGBL3Q8NEM8 1001 aa29.82■■■□□ 2.36
TMEM54-201ENST00000329151 GGA3Q9NZ52 723 aa29.82■■■□□ 2.36
TMEM54-201ENST00000329151 PSME4Q14997 1843 aa29.81■■■□□ 2.36
TMEM54-201ENST00000329151 ANP32CO43423 234 aa29.81■■■□□ 2.36
TMEM54-201ENST00000329151 IGHMBP2P38935 993 aaKnown RBP29.81■■■□□ 2.36
TMEM54-201ENST00000329151 CWF19L2Q2TBE0 894 aaKnown RBP29.81■■■□□ 2.36
TMEM54-201ENST00000329151 CCDC184Q52MB2 194 aa29.81■■■□□ 2.36
TMEM54-201ENST00000329151 UBE3BQ7Z3V4 1068 aa29.81■■■□□ 2.36
TMEM54-201ENST00000329151 TSKSQ9UJT2 592 aa29.81■■■□□ 2.36
TMEM54-201ENST00000329151 NEURL1BA8MQ27 555 aa29.8■■■□□ 2.36
TMEM54-201ENST00000329151 ADM5C9JUS6 153 aa29.8■■■□□ 2.36
TMEM54-201ENST00000329151 EGFRP00533 1210 aa29.8■■■□□ 2.36
TMEM54-201ENST00000329151 PODNQ7Z5L7 613 aa29.8■■■□□ 2.36
TMEM54-201ENST00000329151 TTLL11Q8NHH1 800 aa29.8■■■□□ 2.36
TMEM54-201ENST00000329151 MYH16Q9H6N6 1097 aa29.8■■■□□ 2.36
TMEM54-201ENST00000329151 USP17L3A6NCW0 530 aa29.79■■■□□ 2.36
TMEM54-201ENST00000329151 USP17L4A6NCW7 530 aa29.79■■■□□ 2.36
TMEM54-201ENST00000329151 FKBP5Q13451 457 aaPredicted RBP29.79■■■□□ 2.36
TMEM54-201ENST00000329151 USP17L1Q7RTZ2 530 aa29.79■■■□□ 2.36
TMEM54-201ENST00000329151 FBXW7Q969H0 707 aa29.79■■■□□ 2.36
TMEM54-201ENST00000329151 GREM2Q9H772 168 aa29.79■■■□□ 2.36
TMEM54-201ENST00000329151 BSDC1Q9NW68 430 aaPredicted RBP29.79■■■□□ 2.36
TMEM54-201ENST00000329151 USP17L8P0C7I0 530 aa29.78■■■□□ 2.36
TMEM54-201ENST00000329151 ABHD8Q96I13 439 aa29.78■■■□□ 2.36
TMEM54-201ENST00000329151 FLIIQ13045 1269 aa29.77■■■□□ 2.36
TMEM54-201ENST00000329151 RGMBQ6NW40 437 aa29.77■■■□□ 2.36
TMEM54-201ENST00000329151 CCDC102AQ96A19 550 aa29.77■■■□□ 2.36
TMEM54-201ENST00000329151 SALL2Q9Y467 1007 aaPredicted RBP29.77■■■□□ 2.36
TMEM54-201ENST00000329151 DLK2Q6UY11 383 aa29.76■■■□□ 2.35
TMEM54-201ENST00000329151 G2E3Q7L622 706 aa29.76■■■□□ 2.35
TMEM54-201ENST00000329151 MPHOSPH8Q99549 860 aa29.76■■■□□ 2.35
TMEM54-201ENST00000329151 MINPP1Q9UNW1 487 aa29.76■■■□□ 2.35
TMEM54-201ENST00000329151 MED23Q9ULK4 1368 aa29.76■■■□□ 2.35
TMEM54-201ENST00000329151 ZNF157P51786 506 aaPredicted RBP29.75■■■□□ 2.35
TMEM54-201ENST00000329151 SCARF1Q14162 830 aa29.75■■■□□ 2.35
TMEM54-201ENST00000329151 NCBP3Q53F19 620 aaKnown RBP29.75■■■□□ 2.35
TMEM54-201ENST00000329151 CASP8AP2Q9UKL3 1982 aa29.75■■■□□ 2.35
TMEM54-201ENST00000329151 ZNF609O15014 1411 aa29.74■■■□□ 2.35
TMEM54-201ENST00000329151 CCT4P50991 539 aaKnown RBP29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms