RNA–Protein interactions for RNA: ENST00000325167.9

CHMP6-201, Transcript of charged multivesicular body protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP6, Length 1,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-201ENST00000325167 A0A0D9SFI3 127 aa23.16■■□□□ 1.3
CHMP6-201ENST00000325167 SKOR2Q2VWA4 1001 aaPredicted RBP23.16■■□□□ 1.3
CHMP6-201ENST00000325167 CAMKK2Q96RR4 588 aa23.16■■□□□ 1.3
CHMP6-201ENST00000325167 UPF3BQ9BZI7 483 aaKnown RBP23.16■■□□□ 1.3
CHMP6-201ENST00000325167 PAG1Q9NWQ8 432 aa23.16■■□□□ 1.3
CHMP6-201ENST00000325167 CYP2E1P05181 493 aaPredicted RBP23.15■■□□□ 1.3
CHMP6-201ENST00000325167 VPS53Q5VIR6 699 aa23.15■■□□□ 1.3
CHMP6-201ENST00000325167 PRPF40BQ6NWY9 871 aaKnown RBP23.15■■□□□ 1.3
CHMP6-201ENST00000325167 TTC14Q96N46 770 aa23.15■■□□□ 1.3
CHMP6-201ENST00000325167 CYP46A1Q9Y6A2 500 aa23.15■■□□□ 1.3
CHMP6-201ENST00000325167 SH3TC1Q8TE82 1336 aa23.15■■□□□ 1.3
CHMP6-201ENST00000325167 IFIT1P09914 478 aaKnown RBP23.14■■□□□ 1.29
CHMP6-201ENST00000325167 ITGA6P23229 1130 aa23.14■■□□□ 1.29
CHMP6-201ENST00000325167 MCMDC2Q4G0Z9 681 aa23.14■■□□□ 1.29
CHMP6-201ENST00000325167 CREB3L3Q68CJ9 461 aa23.14■■□□□ 1.29
CHMP6-201ENST00000325167 RASEFQ8IZ41 740 aa23.14■■□□□ 1.29
CHMP6-201ENST00000325167 ZSWIM6Q9HCJ5 1215 aa23.14■■□□□ 1.29
CHMP6-201ENST00000325167 HELLSQ9NRZ9 838 aa23.14■■□□□ 1.29
CHMP6-201ENST00000325167 TIMM10P62072 90 aa23.13■■□□□ 1.29
CHMP6-201ENST00000325167 KRT32Q14532 448 aa23.13■■□□□ 1.29
CHMP6-201ENST00000325167 TSGA10IPQ3SY00 556 aa23.13■■□□□ 1.29
CHMP6-201ENST00000325167 GORABQ5T7V8 394 aa23.13■■□□□ 1.29
CHMP6-201ENST00000325167 UTP14AQ9BVJ6 771 aaKnown RBP23.13■■□□□ 1.29
CHMP6-201ENST00000325167 PUS3Q9BZE2 481 aaKnown RBP23.13■■□□□ 1.29
CHMP6-201ENST00000325167 LIMCH1Q9UPQ0 1083 aa23.13■■□□□ 1.29
CHMP6-201ENST00000325167 MYH3P11055 1940 aa23.13■■□□□ 1.29
CHMP6-201ENST00000325167 ITPK1Q13572 414 aa23.13■■□□□ 1.29
CHMP6-201ENST00000325167 LDHAL6AQ6ZMR3 332 aa23.13■■□□□ 1.29
CHMP6-201ENST00000325167 ZSCAN31Q96LW9 406 aaPredicted RBP23.13■■□□□ 1.29
CHMP6-201ENST00000325167 U3KPZ7 1027 aaPredicted RBP23.13■■□□□ 1.29
CHMP6-201ENST00000325167 CAMTA2O94983 1202 aa23.12■■□□□ 1.29
CHMP6-201ENST00000325167 CASTP20810 708 aaKnown RBP23.12■■□□□ 1.29
CHMP6-201ENST00000325167 USPL1Q5W0Q7 1092 aa23.12■■□□□ 1.29
CHMP6-201ENST00000325167 CLEC4GQ6UXB4 293 aa23.12■■□□□ 1.29
CHMP6-201ENST00000325167 RIPOR2Q9Y4F9 1068 aa23.12■■□□□ 1.29
CHMP6-201ENST00000325167 SBF2Q86WG5 1849 aa23.12■■□□□ 1.29
CHMP6-201ENST00000325167 UBN2Q6ZU65 1347 aa23.12■■□□□ 1.29
CHMP6-201ENST00000325167 TRAK2O60296 914 aa23.11■■□□□ 1.29
CHMP6-201ENST00000325167 TAF5LO75529 589 aa23.11■■□□□ 1.29
CHMP6-201ENST00000325167 SSFA2P28290 1259 aa23.11■■□□□ 1.29
CHMP6-201ENST00000325167 METTL24Q5JXM2 366 aa23.11■■□□□ 1.29
CHMP6-201ENST00000325167 TTC39AQ5SRH9 613 aa23.11■■□□□ 1.29
CHMP6-201ENST00000325167 JAKMIP1Q96N16 626 aaKnown RBP23.11■■□□□ 1.29
CHMP6-201ENST00000325167 GREM2Q9H772 168 aa23.11■■□□□ 1.29
CHMP6-201ENST00000325167 CNNM1Q9NRU3 951 aa23.11■■□□□ 1.29
CHMP6-201ENST00000325167 SLC27A2O14975 620 aa23.1■■□□□ 1.29
CHMP6-201ENST00000325167 R3HDM1Q15032 1099 aaKnown RBP23.1■■□□□ 1.29
CHMP6-201ENST00000325167 ANKRD1Q15327 319 aa23.1■■□□□ 1.29
CHMP6-201ENST00000325167 DDX46Q7L014 1031 aaKnown RBP23.1■■□□□ 1.29
CHMP6-201ENST00000325167 RUFY3Q7L099 469 aa23.1■■□□□ 1.29
CHMP6-201ENST00000325167 PTF1AQ7RTS3 328 aa23.1■■□□□ 1.29
CHMP6-201ENST00000325167 ZGPATQ8N5A5 531 aaKnown RBP23.1■■□□□ 1.29
CHMP6-201ENST00000325167 ZNF512BQ96KM6 892 aaPredicted RBP23.1■■□□□ 1.29
CHMP6-201ENST00000325167 SH2B1Q9NRF2 756 aaPredicted RBP23.1■■□□□ 1.29
CHMP6-201ENST00000325167 PDRG1Q9NUG6 133 aa23.1■■□□□ 1.29
CHMP6-201ENST00000325167 RPAP1Q9BWH6 1393 aaPredicted RBP23.09■■□□□ 1.29
CHMP6-201ENST00000325167 CNTNAP4Q9C0A0 1308 aa23.09■■□□□ 1.29
CHMP6-201ENST00000325167 GOLIM4O00461 696 aa23.09■■□□□ 1.29
CHMP6-201ENST00000325167 ZFYP08048 801 aaPredicted RBP23.09■■□□□ 1.29
CHMP6-201ENST00000325167 ATP2B3Q16720 1220 aa23.09■■□□□ 1.29
CHMP6-201ENST00000325167 EDC3Q96F86 508 aaKnown RBP23.09■■□□□ 1.29
CHMP6-201ENST00000325167 XAGE2Q96GT9 111 aa23.09■■□□□ 1.29
CHMP6-201ENST00000325167 ALDH8A1Q9H2A2 487 aaPredicted RBP23.09■■□□□ 1.29
CHMP6-201ENST00000325167 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.09■■□□□ 1.29
CHMP6-201ENST00000325167 COL5A3P25940 1745 aaPredicted RBP23.09■■□□□ 1.29
CHMP6-201ENST00000325167 RIC1Q4ADV7 1423 aa23.09■■□□□ 1.29
CHMP6-201ENST00000325167 RTL9Q8NET4 1388 aa23.09■■□□□ 1.29
CHMP6-201ENST00000325167 MROH5Q6ZUA9 1318 aa23.09■■□□□ 1.29
CHMP6-201ENST00000325167 AK2P54819 239 aa23.09■■□□□ 1.29
CHMP6-201ENST00000325167 BAG4O95429 457 aaKnown RBP23.07■■□□□ 1.28
CHMP6-201ENST00000325167 LRP5O75197 1615 aa23.07■■□□□ 1.28
CHMP6-201ENST00000325167 RNF113AO15541 343 aaKnown RBP23.06■■□□□ 1.28
CHMP6-201ENST00000325167 KCNQ2O43526 872 aa23.06■■□□□ 1.28
CHMP6-201ENST00000325167 PDIA4P13667 645 aaKnown RBP23.06■■□□□ 1.28
CHMP6-201ENST00000325167 ZMYM1Q5SVZ6 1142 aa23.06■■□□□ 1.28
CHMP6-201ENST00000325167 RC3H1Q5TC82 1133 aaKnown RBP23.06■■□□□ 1.28
CHMP6-201ENST00000325167 SUSD4Q5VX71 490 aa23.06■■□□□ 1.28
CHMP6-201ENST00000325167 ZNF589Q86UQ0 364 aaPredicted RBP23.06■■□□□ 1.28
CHMP6-201ENST00000325167 CCDC85AQ96PX6 553 aaPredicted RBP23.06■■□□□ 1.28
CHMP6-201ENST00000325167 DSCC1Q9BVC3 393 aa23.06■■□□□ 1.28
CHMP6-201ENST00000325167 CCDC152Q4G0S7 254 aa23.06■■□□□ 1.28
CHMP6-201ENST00000325167 BLOC1S2Q6QNY1 142 aa23.06■■□□□ 1.28
CHMP6-201ENST00000325167 SYNE4Q8N205 404 aa23.06■■□□□ 1.28
CHMP6-201ENST00000325167 PDE8BO95263 885 aa23.05■■□□□ 1.28
CHMP6-201ENST00000325167 NIP7Q9Y221 180 aaKnown RBP eCLIP23.05■■□□□ 1.28
CHMP6-201ENST00000325167 BCORQ6W2J9 1755 aa23.04■■□□□ 1.28
CHMP6-201ENST00000325167 UQCRFS1P1P0C7P4 283 aa23.03■■□□□ 1.28
CHMP6-201ENST00000325167 TTF1Q15361 905 aaPredicted RBP23.03■■□□□ 1.28
CHMP6-201ENST00000325167 ADCK5Q3MIX3 580 aa23.03■■□□□ 1.28
CHMP6-201ENST00000325167 ZSCAN25Q6NSZ9 544 aa23.03■■□□□ 1.28
CHMP6-201ENST00000325167 NOL8Q76FK4 1167 aaKnown RBP23.03■■□□□ 1.28
CHMP6-201ENST00000325167 VGLL2Q8N8G2 317 aa23.03■■□□□ 1.28
CHMP6-201ENST00000325167 NTSR2O95665 410 aa23.03■■□□□ 1.28
CHMP6-201ENST00000325167 BRD1O95696 1058 aa23.03■■□□□ 1.28
CHMP6-201ENST00000325167 HMGB1P09429 215 aaKnown RBP23.03■■□□□ 1.28
CHMP6-201ENST00000325167 PUM3Q15397 648 aaKnown RBP23.03■■□□□ 1.28
CHMP6-201ENST00000325167 BCL11BQ9C0K0 894 aaPredicted RBP23.03■■□□□ 1.28
CHMP6-201ENST00000325167 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.03■■□□□ 1.28
CHMP6-201ENST00000325167 LAMB2P55268 1798 aa23.02■■□□□ 1.28
CHMP6-201ENST00000325167 MYH14Q7Z406 1995 aaKnown RBP23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms