RNA–Protein interactions for RNA: ENST00000324856.11

ARID1A-201, Transcript of AT-rich interaction domain 1A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ARID1A, Length 8,577 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1A-201ENST00000324856 CALCOCO2Q13137 446 aa20.82■□□□□ 0.92
ARID1A-201ENST00000324856 CCDC170Q8IYT3 715 aa20.82■□□□□ 0.92
ARID1A-201ENST00000324856 EXOC6BQ9Y2D4 811 aa20.82■□□□□ 0.92
ARID1A-201ENST00000324856 UTP11Q9Y3A2 253 aaKnown RBP20.82■□□□□ 0.92
ARID1A-201ENST00000324856 MGEA5O60502 916 aa20.81■□□□□ 0.92
ARID1A-201ENST00000324856 IDH1O75874 414 aaKnown RBP20.81■□□□□ 0.92
ARID1A-201ENST00000324856 CSRNP2Q9H175 543 aa20.81■□□□□ 0.92
ARID1A-201ENST00000324856 CASKIN1Q8WXD9 1431 aa20.81■□□□□ 0.92
ARID1A-201ENST00000324856 EVCP57679 992 aa20.81■□□□□ 0.92
ARID1A-201ENST00000324856 THEGQ9P2T0 379 aa20.81■□□□□ 0.92
ARID1A-201ENST00000324856 SYNCQ9H7C4 482 aa20.81■□□□□ 0.92
ARID1A-201ENST00000324856 STAT6P42226 847 aa20.81■□□□□ 0.92
ARID1A-201ENST00000324856 GDPD2Q9HCC8 539 aa20.81■□□□□ 0.92
ARID1A-201ENST00000324856 MIER3Q7Z3K6 550 aa20.81■□□□□ 0.92
ARID1A-201ENST00000324856 NLRP2Q9NX02 1062 aa20.81■□□□□ 0.92
ARID1A-201ENST00000324856 ANKRD12Q6UB98 2062 aa20.81■□□□□ 0.92
ARID1A-201ENST00000324856 NBPF7P0C2Y1 421 aaPredicted RBP20.8■□□□□ 0.92
ARID1A-201ENST00000324856 PRIM1P49642 420 aaKnown RBP20.8■□□□□ 0.92
ARID1A-201ENST00000324856 VIMP08670 466 aaKnown RBP20.8■□□□□ 0.92
ARID1A-201ENST00000324856 PRR16Q569H4 304 aa20.8■□□□□ 0.92
ARID1A-201ENST00000324856 UBLCP1Q8WVY7 318 aaPredicted RBP20.8■□□□□ 0.92
ARID1A-201ENST00000324856 ZNF830Q96NB3 372 aaPredicted RBP20.8■□□□□ 0.92
ARID1A-201ENST00000324856 PANK2Q9BZ23 570 aa20.8■□□□□ 0.92
ARID1A-201ENST00000324856 HMGB2P26583 209 aaKnown RBP20.8■□□□□ 0.92
ARID1A-201ENST00000324856 MRPS27Q92552 414 aaKnown RBP20.8■□□□□ 0.92
ARID1A-201ENST00000324856 NDC80O14777 642 aa20.8■□□□□ 0.92
ARID1A-201ENST00000324856 MAP3K12Q12852 859 aa20.8■□□□□ 0.92
ARID1A-201ENST00000324856 GOLGA6BA6NDN3 693 aa20.8■□□□□ 0.92
ARID1A-201ENST00000324856 LARSQ9P2J5 1176 aaKnown RBP20.8■□□□□ 0.92
ARID1A-201ENST00000324856 RTL1A6NKG5 1358 aa20.79■□□□□ 0.92
ARID1A-201ENST00000324856 DNAJC8O75937 253 aaPredicted RBP20.79■□□□□ 0.92
ARID1A-201ENST00000324856 TRIM14Q14142 442 aa20.79■□□□□ 0.92
ARID1A-201ENST00000324856 VPS52Q8N1B4 723 aa20.79■□□□□ 0.92
ARID1A-201ENST00000324856 MICAL1Q8TDZ2 1067 aa20.79■□□□□ 0.92
ARID1A-201ENST00000324856 SDCCAG8Q86SQ7 713 aaPredicted RBP20.79■□□□□ 0.92
ARID1A-201ENST00000324856 IFT81Q8WYA0 676 aa20.79■□□□□ 0.92
ARID1A-201ENST00000324856 IMPACTQ9P2X3 320 aa20.79■□□□□ 0.92
ARID1A-201ENST00000324856 GKAP1Q5VSY0 366 aaPredicted RBP20.79■□□□□ 0.92
ARID1A-201ENST00000324856 BICDL1Q6ZP65 573 aa20.79■□□□□ 0.92
ARID1A-201ENST00000324856 RPAINQ86UA6 219 aa20.79■□□□□ 0.92
ARID1A-201ENST00000324856 ERMNQ8TAM6 284 aa20.79■□□□□ 0.92
ARID1A-201ENST00000324856 ZNF692Q9BU19 519 aaPredicted RBP20.79■□□□□ 0.92
ARID1A-201ENST00000324856 MYH9P35579 1960 aaKnown RBP20.79■□□□□ 0.92
ARID1A-201ENST00000324856 IARSP41252 1262 aaKnown RBP20.79■□□□□ 0.92
ARID1A-201ENST00000324856 USP48Q86UV5 1035 aa20.79■□□□□ 0.92
ARID1A-201ENST00000324856 ABTB2Q8N961 1025 aa20.79■□□□□ 0.92
ARID1A-201ENST00000324856 Q9H521 79 aa20.79■□□□□ 0.92
ARID1A-201ENST00000324856 ANKRD24Q8TF21 1146 aa20.78■□□□□ 0.92
ARID1A-201ENST00000324856 MKNK2Q9HBH9 465 aa20.78■□□□□ 0.92
ARID1A-201ENST00000324856 NLRP5P59047 1200 aa20.78■□□□□ 0.92
ARID1A-201ENST00000324856 KCNK9Q9NPC2 374 aa20.78■□□□□ 0.92
ARID1A-201ENST00000324856 NPHP3Q7Z494 1330 aa20.78■□□□□ 0.92
ARID1A-201ENST00000324856 TTC36A6NLP5 189 aa20.78■□□□□ 0.92
ARID1A-201ENST00000324856 AFAP1L2Q8N4X5 818 aa20.78■□□□□ 0.92
ARID1A-201ENST00000324856 PPP1R7Q15435 360 aa20.78■□□□□ 0.92
ARID1A-201ENST00000324856 RAB11FIP4Q86YS3 637 aa20.78■□□□□ 0.92
ARID1A-201ENST00000324856 ARHGEF2Q92974 986 aaKnown RBP20.78■□□□□ 0.92
ARID1A-201ENST00000324856 RHOXF2BP0C7M4 288 aa20.78■□□□□ 0.92
ARID1A-201ENST00000324856 RARSP54136 660 aaKnown RBP20.78■□□□□ 0.92
ARID1A-201ENST00000324856 NLRP6P59044 892 aa20.78■□□□□ 0.92
ARID1A-201ENST00000324856 TTF1Q15361 905 aaPredicted RBP20.78■□□□□ 0.92
ARID1A-201ENST00000324856 RHOXF2Q9BQY4 288 aa20.78■□□□□ 0.92
ARID1A-201ENST00000324856 IL1RAPL2Q9NP60 686 aa20.78■□□□□ 0.92
ARID1A-201ENST00000324856 FAN1Q9Y2M0 1017 aa20.78■□□□□ 0.92
ARID1A-201ENST00000324856 RAB3GAP1Q15042 981 aa20.77■□□□□ 0.92
ARID1A-201ENST00000324856 CABP2Q9NPB3 220 aa20.77■□□□□ 0.92
ARID1A-201ENST00000324856 ELP1O95163 1332 aa20.77■□□□□ 0.92
ARID1A-201ENST00000324856 SNX16P57768 344 aa20.77■□□□□ 0.92
ARID1A-201ENST00000324856 ZSCAN26Q16670 478 aa20.77■□□□□ 0.92
ARID1A-201ENST00000324856 CETN3O15182 167 aa20.77■□□□□ 0.92
ARID1A-201ENST00000324856 IGHMBP2P38935 993 aaKnown RBP20.77■□□□□ 0.92
ARID1A-201ENST00000324856 ARL1P40616 181 aaPredicted RBP20.77■□□□□ 0.92
ARID1A-201ENST00000324856 PDE1CQ14123 709 aaPredicted RBP20.77■□□□□ 0.92
ARID1A-201ENST00000324856 RPGRIP1Q96KN7 1286 aa20.77■□□□□ 0.92
ARID1A-201ENST00000324856 AOPEPQ8N6M6 819 aa20.76■□□□□ 0.91
ARID1A-201ENST00000324856 BAG1Q99933 345 aaPredicted RBP20.76■□□□□ 0.91
ARID1A-201ENST00000324856 GUCA1BQ9UMX6 200 aa20.76■□□□□ 0.91
ARID1A-201ENST00000324856 NUTM2AQ8IVF1 878 aaPredicted RBP20.76■□□□□ 0.91
ARID1A-201ENST00000324856 BTBD11A6QL63 1104 aa20.76■□□□□ 0.91
ARID1A-201ENST00000324856 HPDP32754 393 aaPredicted RBP20.76■□□□□ 0.91
ARID1A-201ENST00000324856 METAP2P50579 478 aaKnown RBP eCLIP20.76■□□□□ 0.918e-8■□□□□ 9.5
ARID1A-201ENST00000324856 HSP90AA5PQ58FG0 334 aa20.76■□□□□ 0.91
ARID1A-201ENST00000324856 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.76■□□□□ 0.91
ARID1A-201ENST00000324856 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.76■□□□□ 0.913e-7■■□□□ 11.6
ARID1A-201ENST00000324856 NFE2L2Q16236 605 aa20.76■□□□□ 0.91
ARID1A-201ENST00000324856 TRIM4Q9C037 500 aa20.76■□□□□ 0.91
ARID1A-201ENST00000324856 TFIP11Q9UBB9 837 aaKnown RBP20.76■□□□□ 0.91
ARID1A-201ENST00000324856 CABS1Q96KC9 395 aa20.76■□□□□ 0.91
ARID1A-201ENST00000324856 INTS4Q96HW7 963 aaKnown RBP20.75■□□□□ 0.91
ARID1A-201ENST00000324856 BICD1Q96G01 975 aa20.75■□□□□ 0.91
ARID1A-201ENST00000324856 TBCAO75347 108 aaKnown RBP20.75■□□□□ 0.91
ARID1A-201ENST00000324856 TMPOP42166 694 aaKnown RBP20.75■□□□□ 0.91
ARID1A-201ENST00000324856 MUM1Q2TAK8 710 aa20.75■□□□□ 0.91
ARID1A-201ENST00000324856 IFIT3O14879 490 aaKnown RBP20.75■□□□□ 0.91
ARID1A-201ENST00000324856 ZNF569Q5MCW4 686 aa20.75■□□□□ 0.91
ARID1A-201ENST00000324856 SULT6B1Q6IMI4 303 aa20.75■□□□□ 0.91
ARID1A-201ENST00000324856 TRIM35Q9UPQ4 493 aa20.75■□□□□ 0.91
ARID1A-201ENST00000324856 CAPZA3Q96KX2 299 aa20.75■□□□□ 0.91
ARID1A-201ENST00000324856 FAM135AQ9P2D6 1515 aa20.75■□□□□ 0.91
ARID1A-201ENST00000324856 PPP1R9BQ96SB3 815 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms