RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 C2CD5Q86YS7 1000 aa16.8■□□□□ 0.28
PRPF18-201ENST00000320054 CELF1Q92879 486 aaKnown RBP16.8■□□□□ 0.28
PRPF18-201ENST00000320054 APBB1O00213 710 aa16.79■□□□□ 0.28
PRPF18-201ENST00000320054 BBOX1O75936 387 aa16.79■□□□□ 0.28
PRPF18-201ENST00000320054 ALDH1B1P30837 517 aa16.79■□□□□ 0.28
PRPF18-201ENST00000320054 TMC4Q7Z404 712 aa16.79■□□□□ 0.28
PRPF18-201ENST00000320054 GPR108Q9NPR9 543 aa16.79■□□□□ 0.28
PRPF18-201ENST00000320054 SLX4Q8IY92 1834 aa16.79■□□□□ 0.28
PRPF18-201ENST00000320054 CEP126Q9P2H0 1117 aa16.78■□□□□ 0.28
PRPF18-201ENST00000320054 CD2APQ9Y5K6 639 aa16.78■□□□□ 0.28
PRPF18-201ENST00000320054 LTBP1Q14766 1721 aa16.77■□□□□ 0.28
PRPF18-201ENST00000320054 SMARCA5O60264 1052 aaPredicted RBP16.77■□□□□ 0.28
PRPF18-201ENST00000320054 TGFB2P61812 414 aa16.77■□□□□ 0.28
PRPF18-201ENST00000320054 TFCP2Q12800 502 aa16.77■□□□□ 0.28
PRPF18-201ENST00000320054 CLASRPQ8N2M8 674 aaKnown RBP16.77■□□□□ 0.28
PRPF18-201ENST00000320054 VGLL2Q8N8G2 317 aa16.77■□□□□ 0.28
PRPF18-201ENST00000320054 LNPKQ9C0E8 428 aa16.77■□□□□ 0.28
PRPF18-201ENST00000320054 METTL24Q5JXM2 366 aa16.76■□□□□ 0.27
PRPF18-201ENST00000320054 CNKSR1Q969H4 720 aa16.76■□□□□ 0.27
PRPF18-201ENST00000320054 IL1RAPL2Q9NP60 686 aa16.76■□□□□ 0.27
PRPF18-201ENST00000320054 PDE8BO95263 885 aa16.75■□□□□ 0.27
PRPF18-201ENST00000320054 CHRNA5P30532 468 aa16.75■□□□□ 0.27
PRPF18-201ENST00000320054 ANKRD2Q9GZV1 360 aa16.75■□□□□ 0.27
PRPF18-201ENST00000320054 MINPP1Q9UNW1 487 aa16.75■□□□□ 0.27
PRPF18-201ENST00000320054 AKAP2Q9Y2D5 859 aa16.75■□□□□ 0.27
PRPF18-201ENST00000320054 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.75■□□□□ 0.27
PRPF18-201ENST00000320054 ZNF609O15014 1411 aa16.75■□□□□ 0.27
PRPF18-201ENST00000320054 PDE4AP27815 886 aa16.74■□□□□ 0.27
PRPF18-201ENST00000320054 CHRNDQ07001 517 aa16.74■□□□□ 0.27
PRPF18-201ENST00000320054 TNNI3KQ59H18 835 aa16.74■□□□□ 0.27
PRPF18-201ENST00000320054 SP8Q8IXZ3 490 aa16.74■□□□□ 0.27
PRPF18-201ENST00000320054 ZNF622Q969S3 477 aaKnown RBP eCLIP16.74■□□□□ 0.274e-6■□□□□ 10.8
PRPF18-201ENST00000320054 FPGT-TNNI3KV9GXZ4 949 aa16.74■□□□□ 0.27
PRPF18-201ENST00000320054 SALL3Q9BXA9 1300 aa16.73■□□□□ 0.27
PRPF18-201ENST00000320054 ARFGEF1Q9Y6D6 1849 aa16.73■□□□□ 0.27
PRPF18-201ENST00000320054 PPEF1O14829 653 aaPredicted RBP16.73■□□□□ 0.27
PRPF18-201ENST00000320054 DPEP1P16444 411 aa16.73■□□□□ 0.27
PRPF18-201ENST00000320054 KCNA3P22001 575 aa16.73■□□□□ 0.27
PRPF18-201ENST00000320054 EAF2Q96CJ1 260 aaPredicted RBP16.73■□□□□ 0.27
PRPF18-201ENST00000320054 ATP6V0A2Q9Y487 856 aa16.73■□□□□ 0.27
PRPF18-201ENST00000320054 FGFR2P21802 821 aa16.72■□□□□ 0.27
PRPF18-201ENST00000320054 PUM3Q15397 648 aaKnown RBP16.72■□□□□ 0.27
PRPF18-201ENST00000320054 AACSQ86V21 672 aa16.72■□□□□ 0.27
PRPF18-201ENST00000320054 C16orf71Q8IYS4 520 aaPredicted RBP16.72■□□□□ 0.27
PRPF18-201ENST00000320054 AK9Q5TCS8 1911 aa16.72■□□□□ 0.27
PRPF18-201ENST00000320054 MYH13Q9UKX3 1938 aa16.71■□□□□ 0.27
PRPF18-201ENST00000320054 A0A0G2JLW4 131 aa16.71■□□□□ 0.27
PRPF18-201ENST00000320054 A0A1B0GUL7 405 aa16.71■□□□□ 0.27
PRPF18-201ENST00000320054 IFIT2P09913 472 aaKnown RBP16.71■□□□□ 0.27
PRPF18-201ENST00000320054 UBE4AQ14139 1066 aa16.71■□□□□ 0.27
PRPF18-201ENST00000320054 ATP2B3Q16720 1220 aa16.71■□□□□ 0.27
PRPF18-201ENST00000320054 PRPF40BQ6NWY9 871 aaKnown RBP16.71■□□□□ 0.27
PRPF18-201ENST00000320054 STAP2Q9UGK3 403 aa16.71■□□□□ 0.27
PRPF18-201ENST00000320054 XDHP47989 1333 aa16.7■□□□□ 0.26
PRPF18-201ENST00000320054 CC2D2BQ6DHV5 1058 aa16.7■□□□□ 0.26
PRPF18-201ENST00000320054 PLEKHM2Q8IWE5 1019 aa16.7■□□□□ 0.26
PRPF18-201ENST00000320054 TTLL6Q8N841 843 aa16.7■□□□□ 0.26
PRPF18-201ENST00000320054 HELBQ8NG08 1087 aaPredicted RBP16.7■□□□□ 0.26
PRPF18-201ENST00000320054 LPIN2Q92539 896 aa16.7■□□□□ 0.26
PRPF18-201ENST00000320054 OSBPL3Q9H4L5 887 aa16.7■□□□□ 0.26
PRPF18-201ENST00000320054 PODXL2Q9NZ53 605 aa16.7■□□□□ 0.26
PRPF18-201ENST00000320054 AOX1Q06278 1338 aa16.7■□□□□ 0.26
PRPF18-201ENST00000320054 TTC41PQ6P2S7 1318 aa16.7■□□□□ 0.26
PRPF18-201ENST00000320054 AKAP11Q9UKA4 1901 aa16.69■□□□□ 0.26
PRPF18-201ENST00000320054 TAF5LO75529 589 aa16.69■□□□□ 0.26
PRPF18-201ENST00000320054 SLC5A1P13866 664 aa16.69■□□□□ 0.26
PRPF18-201ENST00000320054 MX1P20591 662 aa16.69■□□□□ 0.26
PRPF18-201ENST00000320054 TIMM10P62072 90 aa16.69■□□□□ 0.26
PRPF18-201ENST00000320054 SKAP1Q86WV1 359 aa16.69■□□□□ 0.26
PRPF18-201ENST00000320054 OTUD7AQ8TE49 926 aaPredicted RBP16.69■□□□□ 0.26
PRPF18-201ENST00000320054 C7orf43Q8WVR3 580 aa16.69■□□□□ 0.26
PRPF18-201ENST00000320054 CCDC8Q9H0W5 538 aaPredicted RBP16.69■□□□□ 0.26
PRPF18-201ENST00000320054 TMX4Q9H1E5 349 aaPredicted RBP16.69■□□□□ 0.26
PRPF18-201ENST00000320054 PIM2Q9P1W9 311 aa16.69■□□□□ 0.26
PRPF18-201ENST00000320054 DBNLQ9UJU6 430 aaKnown RBP16.69■□□□□ 0.26
PRPF18-201ENST00000320054 LEMD3Q9Y2U8 911 aa16.69■□□□□ 0.26
PRPF18-201ENST00000320054 DUOX1Q9NRD9 1551 aa16.68■□□□□ 0.26
PRPF18-201ENST00000320054 FER1L6Q2WGJ9 1857 aa16.68■□□□□ 0.26
PRPF18-201ENST00000320054 RGS3P49796 1198 aa16.68■□□□□ 0.26
PRPF18-201ENST00000320054 PDE1AP54750 535 aa16.68■□□□□ 0.26
PRPF18-201ENST00000320054 GPSM2P81274 684 aa16.68■□□□□ 0.26
PRPF18-201ENST00000320054 GRIPAP1Q4V328 841 aa16.68■□□□□ 0.26
PRPF18-201ENST00000320054 GPATCH3Q96I76 525 aa16.68■□□□□ 0.26
PRPF18-201ENST00000320054 NEUROD6Q96NK8 337 aa16.68■□□□□ 0.26
PRPF18-201ENST00000320054 DBNDD2Q9BQY9 259 aa16.68■□□□□ 0.26
PRPF18-201ENST00000320054 PPP1R1BQ9UD71 204 aaPredicted RBP16.68■□□□□ 0.26
PRPF18-201ENST00000320054 IFIT1P09914 478 aaKnown RBP16.67■□□□□ 0.26
PRPF18-201ENST00000320054 ATP2B4P23634 1241 aa16.67■□□□□ 0.26
PRPF18-201ENST00000320054 KLHL34Q8N239 644 aa16.67■□□□□ 0.26
PRPF18-201ENST00000320054 XAGE2Q96GT9 111 aa16.67■□□□□ 0.26
PRPF18-201ENST00000320054 BCL11AQ9H165 835 aa16.67■□□□□ 0.26
PRPF18-201ENST00000320054 ECHDC1Q9NTX5 307 aa16.67■□□□□ 0.26
PRPF18-201ENST00000320054 TLR7Q9NYK1 1049 aaKnown RBP16.67■□□□□ 0.26
PRPF18-201ENST00000320054 ANKIB1Q9P2G1 1089 aa16.67■□□□□ 0.26
PRPF18-201ENST00000320054 SNED1Q8TER0 1413 aa16.67■□□□□ 0.26
PRPF18-201ENST00000320054 ZNF804BA4D1E1 1349 aa16.67■□□□□ 0.26
PRPF18-201ENST00000320054 KCNJ4P48050 445 aa16.66■□□□□ 0.26
PRPF18-201ENST00000320054 C15orf52Q6ZUT6 534 aaKnown RBP16.66■□□□□ 0.26
PRPF18-201ENST00000320054 NSFL1CQ9UNZ2 370 aaKnown RBP16.66■□□□□ 0.26
PRPF18-201ENST00000320054 ERC2O15083 957 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms