RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 ECE2O60344 883 aa18.43■□□□□ 0.54
RPP40-201ENST00000319533 HSP90B1P14625 803 aaKnown RBP18.43■□□□□ 0.54
RPP40-201ENST00000319533 BRPF1P55201 1214 aaPredicted RBP18.43■□□□□ 0.54
RPP40-201ENST00000319533 GNAI1P63096 354 aa18.43■□□□□ 0.54
RPP40-201ENST00000319533 GOLGA2Q08379 1002 aa18.43■□□□□ 0.54
RPP40-201ENST00000319533 GRM1Q13255 1194 aa18.43■□□□□ 0.54
RPP40-201ENST00000319533 RTL5Q5HYW3 569 aaPredicted RBP18.43■□□□□ 0.54
RPP40-201ENST00000319533 RIC3Q7Z5B4 369 aa18.43■□□□□ 0.54
RPP40-201ENST00000319533 PCCAP05165 728 aaPredicted RBP18.42■□□□□ 0.54
RPP40-201ENST00000319533 CALD1Q05682 793 aaKnown RBP18.42■□□□□ 0.54
RPP40-201ENST00000319533 SAMD7Q7Z3H4 446 aa18.42■□□□□ 0.54
RPP40-201ENST00000319533 USP48Q86UV5 1035 aa18.42■□□□□ 0.54
RPP40-201ENST00000319533 CCDC191Q8NCU4 936 aa18.42■□□□□ 0.54
RPP40-201ENST00000319533 KCNQ5Q9NR82 932 aa18.42■□□□□ 0.54
RPP40-201ENST00000319533 APAF1O14727 1248 aa18.41■□□□□ 0.54
RPP40-201ENST00000319533 VIL1P09327 827 aaKnown RBP18.41■□□□□ 0.54
RPP40-201ENST00000319533 SEC31BQ9NQW1 1179 aa18.41■□□□□ 0.54
RPP40-201ENST00000319533 ZNF609O15014 1411 aa18.4■□□□□ 0.54
RPP40-201ENST00000319533 EGFRP00533 1210 aa18.4■□□□□ 0.54
RPP40-201ENST00000319533 DOK7Q18PE1 504 aa18.4■□□□□ 0.54
RPP40-201ENST00000319533 TBC1D10BQ4KMP7 808 aaPredicted RBP18.4■□□□□ 0.54
RPP40-201ENST00000319533 MYD88Q99836 296 aa18.4■□□□□ 0.54
RPP40-201ENST00000319533 ZC3H12CQ9C0D7 883 aaKnown RBP18.4■□□□□ 0.54
RPP40-201ENST00000319533 ZNF408Q9H9D4 720 aa18.4■□□□□ 0.54
RPP40-201ENST00000319533 SCN9AQ15858 1988 aa18.39■□□□□ 0.53
RPP40-201ENST00000319533 PDE8AO60658 829 aa18.39■□□□□ 0.53
RPP40-201ENST00000319533 NOGQ13253 232 aa18.39■□□□□ 0.53
RPP40-201ENST00000319533 KRT26Q7Z3Y9 468 aa18.39■□□□□ 0.53
RPP40-201ENST00000319533 C8orf58Q8NAV2 365 aa18.39■□□□□ 0.53
RPP40-201ENST00000319533 METTL22Q9BUU2 404 aaPredicted RBP18.39■□□□□ 0.53
RPP40-201ENST00000319533 CHMP4AQ9BY43 222 aa18.39■□□□□ 0.53
RPP40-201ENST00000319533 ELL2O00472 640 aaPredicted RBP18.38■□□□□ 0.53
RPP40-201ENST00000319533 CCDC152Q4G0S7 254 aa18.38■□□□□ 0.53
RPP40-201ENST00000319533 DLK2Q6UY11 383 aa18.38■□□□□ 0.53
RPP40-201ENST00000319533 CWC25Q9NXE8 425 aaPredicted RBP18.38■□□□□ 0.53
RPP40-201ENST00000319533 TSKSQ9UJT2 592 aa18.38■□□□□ 0.53
RPP40-201ENST00000319533 POLR2AP24928 1970 aaKnown RBP18.37■□□□□ 0.53
RPP40-201ENST00000319533 HUNKP57058 714 aa18.37■□□□□ 0.53
RPP40-201ENST00000319533 GGA1Q9UJY5 639 aa18.37■□□□□ 0.53
RPP40-201ENST00000319533 FAM155AB1AL88 458 aaPredicted RBP18.36■□□□□ 0.53
RPP40-201ENST00000319533 UFL1O94874 794 aa18.36■□□□□ 0.53
RPP40-201ENST00000319533 ZNF280AP59817 542 aaPredicted RBP18.36■□□□□ 0.53
RPP40-201ENST00000319533 KIF4BQ2VIQ3 1234 aa18.36■□□□□ 0.53
RPP40-201ENST00000319533 CCDC30Q5VVM6 783 aa18.36■□□□□ 0.53
RPP40-201ENST00000319533 DCPSQ96C86 337 aaKnown RBP18.36■□□□□ 0.53
RPP40-201ENST00000319533 ZIC5Q96T25 663 aa18.36■□□□□ 0.53
RPP40-201ENST00000319533 GBA2Q9HCG7 927 aaPredicted RBP18.36■□□□□ 0.53
RPP40-201ENST00000319533 ANKIB1Q9P2G1 1089 aa18.36■□□□□ 0.53
RPP40-201ENST00000319533 ADM5C9JUS6 153 aa18.35■□□□□ 0.53
RPP40-201ENST00000319533 DDX58O95786 925 aaKnown RBP18.35■□□□□ 0.53
RPP40-201ENST00000319533 RBM26Q5T8P6 1007 aaKnown RBP18.35■□□□□ 0.53
RPP40-201ENST00000319533 RGMBQ6NW40 437 aa18.35■□□□□ 0.53
RPP40-201ENST00000319533 AGBL3Q8NEM8 1001 aa18.35■□□□□ 0.53
RPP40-201ENST00000319533 PSME4Q14997 1843 aa18.35■□□□□ 0.53
RPP40-201ENST00000319533 XDHP47989 1333 aa18.34■□□□□ 0.53
RPP40-201ENST00000319533 RGS19P49795 217 aa18.34■□□□□ 0.53
RPP40-201ENST00000319533 RSBN1LQ6PCB5 846 aaPredicted RBP18.34■□□□□ 0.53
RPP40-201ENST00000319533 ANKRD18AQ8IVF6 992 aa18.34■□□□□ 0.53
RPP40-201ENST00000319533 C2orf69Q8N8R5 385 aa18.34■□□□□ 0.53
RPP40-201ENST00000319533 CCDC102AQ96A19 550 aa18.34■□□□□ 0.53
RPP40-201ENST00000319533 GMLQ99445 158 aa18.34■□□□□ 0.53
RPP40-201ENST00000319533 IGKV5-2P06315 115 aa18.33■□□□□ 0.52
RPP40-201ENST00000319533 ATP2B4P23634 1241 aa18.33■□□□□ 0.52
RPP40-201ENST00000319533 KSR2Q6VAB6 950 aa18.33■□□□□ 0.52
RPP40-201ENST00000319533 TSPYL6Q8N831 410 aa18.33■□□□□ 0.52
RPP40-201ENST00000319533 JARID2Q92833 1246 aaPredicted RBP18.33■□□□□ 0.52
RPP40-201ENST00000319533 MAP3K2Q9Y2U5 619 aa18.33■□□□□ 0.52
RPP40-201ENST00000319533 G3V3G9 751 aa18.32■□□□□ 0.52
RPP40-201ENST00000319533 CTSWP56202 376 aa18.32■□□□□ 0.52
RPP40-201ENST00000319533 DCAF8Q5TAQ9 597 aa18.32■□□□□ 0.52
RPP40-201ENST00000319533 PODNQ7Z5L7 613 aa18.32■□□□□ 0.52
RPP40-201ENST00000319533 SULF1Q8IWU6 871 aa18.32■□□□□ 0.52
RPP40-201ENST00000319533 GGA3Q9NZ52 723 aa18.32■□□□□ 0.52
RPP40-201ENST00000319533 CASP8AP2Q9UKL3 1982 aa18.31■□□□□ 0.52
RPP40-201ENST00000319533 ASTN2O75129 1339 aaPredicted RBP18.31■□□□□ 0.52
RPP40-201ENST00000319533 PI4KAP2A4QPH2 592 aa18.31■□□□□ 0.52
RPP40-201ENST00000319533 CCDC27Q2M243 656 aa18.31■□□□□ 0.52
RPP40-201ENST00000319533 PI4KAP1Q8N8J0 262 aa18.31■□□□□ 0.52
RPP40-201ENST00000319533 TTLL11Q8NHH1 800 aa18.31■□□□□ 0.52
RPP40-201ENST00000319533 CCDC85AQ96PX6 553 aaPredicted RBP18.31■□□□□ 0.52
RPP40-201ENST00000319533 CDC5LQ99459 802 aaKnown RBP18.31■□□□□ 0.52
RPP40-201ENST00000319533 MCOLN1Q9GZU1 580 aa18.31■□□□□ 0.52
RPP40-201ENST00000319533 BSDC1Q9NW68 430 aaPredicted RBP18.31■□□□□ 0.52
RPP40-201ENST00000319533 SAGE1Q9NXZ1 904 aa18.31■□□□□ 0.52
RPP40-201ENST00000319533 CCDC85CA6NKD9 419 aa18.3■□□□□ 0.52
RPP40-201ENST00000319533 SCARF1Q14162 830 aa18.3■□□□□ 0.52
RPP40-201ENST00000319533 CDCA5Q96FF9 252 aa18.3■□□□□ 0.52
RPP40-201ENST00000319533 MED23Q9ULK4 1368 aa18.3■□□□□ 0.52
RPP40-201ENST00000319533 PITPNM2Q9BZ72 1349 aa18.29■□□□□ 0.52
RPP40-201ENST00000319533 USP17L3A6NCW0 530 aa18.29■□□□□ 0.52
RPP40-201ENST00000319533 USP17L4A6NCW7 530 aa18.29■□□□□ 0.52
RPP40-201ENST00000319533 SLC10A3P09131 477 aa18.29■□□□□ 0.52
RPP40-201ENST00000319533 USP17L8P0C7I0 530 aa18.29■□□□□ 0.52
RPP40-201ENST00000319533 ZNF157P51786 506 aaPredicted RBP18.29■□□□□ 0.52
RPP40-201ENST00000319533 KIF23Q02241 960 aaPredicted RBP18.29■□□□□ 0.52
RPP40-201ENST00000319533 USP17L1Q7RTZ2 530 aa18.29■□□□□ 0.52
RPP40-201ENST00000319533 MINPP1Q9UNW1 487 aa18.29■□□□□ 0.52
RPP40-201ENST00000319533 ZNF316A6NFI3 1004 aaPredicted RBP18.28■□□□□ 0.52
RPP40-201ENST00000319533 NEURL1BA8MQ27 555 aa18.28■□□□□ 0.52
RPP40-201ENST00000319533 H7C1W4 665 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 152.3 ms