RNA–Protein interactions for RNA: ENST00000318129.5

GINS3-201, Transcript of GINS complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GINS3, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-201ENST00000318129 SPRYD3Q8NCJ5 442 aa12.35□□□□□ -0.43
GINS3-201ENST00000318129 GREM2Q9H772 168 aa12.35□□□□□ -0.43
GINS3-201ENST00000318129 SMARCA5O60264 1052 aaPredicted RBP12.35□□□□□ -0.43
GINS3-201ENST00000318129 UPF1Q92900 1129 aaKnown RBP eCLIP12.35□□□□□ -0.43
GINS3-201ENST00000318129 SIL1Q9H173 461 aa12.35□□□□□ -0.43
GINS3-201ENST00000318129 RIC1Q4ADV7 1423 aa12.35□□□□□ -0.43
GINS3-201ENST00000318129 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.34□□□□□ -0.43
GINS3-201ENST00000318129 ZSCAN30Q86W11 494 aa12.34□□□□□ -0.43
GINS3-201ENST00000318129 CLASRPQ8N2M8 674 aaKnown RBP12.34□□□□□ -0.43
GINS3-201ENST00000318129 KLHDC4Q8TBB5 520 aa12.34□□□□□ -0.43
GINS3-201ENST00000318129 POLRMTO00411 1230 aaKnown RBP12.34□□□□□ -0.43
GINS3-201ENST00000318129 SASH1O94885 1247 aa12.34□□□□□ -0.43
GINS3-201ENST00000318129 SLC16A10Q8TF71 515 aa12.34□□□□□ -0.43
GINS3-201ENST00000318129 CCDC85AQ96PX6 553 aaPredicted RBP12.34□□□□□ -0.43
GINS3-201ENST00000318129 PPP1R9BQ96SB3 815 aa12.34□□□□□ -0.43
GINS3-201ENST00000318129 DDR1Q08345 913 aa12.33□□□□□ -0.44
GINS3-201ENST00000318129 PRR5LQ6MZQ0 368 aa12.33□□□□□ -0.44
GINS3-201ENST00000318129 PLEKHM2Q8IWE5 1019 aa12.33□□□□□ -0.44
GINS3-201ENST00000318129 ZNF594Q96JF6 807 aaPredicted RBP12.33□□□□□ -0.44
GINS3-201ENST00000318129 CDC5LQ99459 802 aaKnown RBP12.33□□□□□ -0.44
GINS3-201ENST00000318129 PARP3Q9Y6F1 533 aa12.33□□□□□ -0.44
GINS3-201ENST00000318129 ABCC12Q96J65 1359 aa12.33□□□□□ -0.44
GINS3-201ENST00000318129 ATG9AQ7Z3C6 839 aa12.32□□□□□ -0.44
GINS3-201ENST00000318129 C16orf71Q8IYS4 520 aaPredicted RBP12.32□□□□□ -0.44
GINS3-201ENST00000318129 IL1RAPL2Q9NP60 686 aa12.32□□□□□ -0.44
GINS3-201ENST00000318129 GPR108Q9NPR9 543 aa12.32□□□□□ -0.44
GINS3-201ENST00000318129 IGHMBP2P38935 993 aaKnown RBP12.32□□□□□ -0.44
GINS3-201ENST00000318129 CCDC173Q0VFZ6 552 aa12.32□□□□□ -0.44
GINS3-201ENST00000318129 LDHAL6AQ6ZMR3 332 aa12.32□□□□□ -0.44
GINS3-201ENST00000318129 OSBPL3Q9H4L5 887 aa12.32□□□□□ -0.44
GINS3-201ENST00000318129 FAM13BQ9NYF5 915 aa12.32□□□□□ -0.44
GINS3-201ENST00000318129 CEP126Q9P2H0 1117 aa12.32□□□□□ -0.44
GINS3-201ENST00000318129 IFIT2P09913 472 aaKnown RBP12.31□□□□□ -0.44
GINS3-201ENST00000318129 CNNM1Q9NRU3 951 aa12.31□□□□□ -0.44
GINS3-201ENST00000318129 STAP2Q9UGK3 403 aa12.31□□□□□ -0.44
GINS3-201ENST00000318129 MMP10P09238 476 aa12.31□□□□□ -0.44
GINS3-201ENST00000318129 TFCP2Q12800 502 aa12.31□□□□□ -0.44
GINS3-201ENST00000318129 LRRC24Q50LG9 513 aa12.31□□□□□ -0.44
GINS3-201ENST00000318129 GPATCH3Q96I76 525 aa12.31□□□□□ -0.44
GINS3-201ENST00000318129 MPHOSPH8Q99549 860 aa12.31□□□□□ -0.44
GINS3-201ENST00000318129 AKAP2Q9Y2D5 859 aa12.31□□□□□ -0.44
GINS3-201ENST00000318129 RIPOR2Q9Y4F9 1068 aa12.31□□□□□ -0.44
GINS3-201ENST00000318129 AOX1Q06278 1338 aa12.31□□□□□ -0.44
GINS3-201ENST00000318129 MX1P20591 662 aa12.3□□□□□ -0.44
GINS3-201ENST00000318129 PDE1AP54750 535 aa12.3□□□□□ -0.44
GINS3-201ENST00000318129 DDX46Q7L014 1031 aaKnown RBP12.3□□□□□ -0.44
GINS3-201ENST00000318129 AACSQ86V21 672 aa12.3□□□□□ -0.44
GINS3-201ENST00000318129 PUS3Q9BZE2 481 aaKnown RBP12.3□□□□□ -0.44
GINS3-201ENST00000318129 SEC31BQ9NQW1 1179 aa12.3□□□□□ -0.44
GINS3-201ENST00000318129 MROH5Q6ZUA9 1318 aa12.3□□□□□ -0.44
GINS3-201ENST00000318129 DDIT3P35638 169 aa12.3□□□□□ -0.44
GINS3-201ENST00000318129 C3orf67Q6ZVT6 689 aa12.3□□□□□ -0.44
GINS3-201ENST00000318129 ANKRD18AQ8IVF6 992 aa12.3□□□□□ -0.44
GINS3-201ENST00000318129 SALL3Q9BXA9 1300 aa12.3□□□□□ -0.44
GINS3-201ENST00000318129 NRXN2Q9P2S2 1712 aa12.29□□□□□ -0.44
GINS3-201ENST00000318129 TNNI3KQ59H18 835 aa12.29□□□□□ -0.44
GINS3-201ENST00000318129 BMP2KLQ5H9B9 411 aa12.29□□□□□ -0.44
GINS3-201ENST00000318129 TTC41PQ6P2S7 1318 aa12.29□□□□□ -0.44
GINS3-201ENST00000318129 ILDR2Q71H61 639 aa12.29□□□□□ -0.44
GINS3-201ENST00000318129 MTERF4Q7Z6M4 381 aaKnown RBP12.29□□□□□ -0.44
GINS3-201ENST00000318129 OTUD7AQ8TE49 926 aaPredicted RBP12.29□□□□□ -0.44
GINS3-201ENST00000318129 BRIP1Q9BX63 1249 aa12.29□□□□□ -0.44
GINS3-201ENST00000318129 FPGT-TNNI3KV9GXZ4 949 aa12.29□□□□□ -0.44
GINS3-201ENST00000318129 PCNTO95613 3336 aa12.29□□□□□ -0.44
GINS3-201ENST00000318129 KLRG2A4D1S0 409 aaPredicted RBP12.28□□□□□ -0.44
GINS3-201ENST00000318129 METTL24Q5JXM2 366 aa12.28□□□□□ -0.44
GINS3-201ENST00000318129 MSL1Q68DK7 614 aa12.28□□□□□ -0.44
GINS3-201ENST00000318129 CCDC24Q8N4L8 307 aa12.28□□□□□ -0.44
GINS3-201ENST00000318129 RPGRQ92834 1020 aaKnown RBP12.28□□□□□ -0.44
GINS3-201ENST00000318129 EAF2Q96CJ1 260 aaPredicted RBP12.28□□□□□ -0.44
GINS3-201ENST00000318129 BSDC1Q9NW68 430 aaPredicted RBP12.28□□□□□ -0.44
GINS3-201ENST00000318129 ERC2O15083 957 aa12.28□□□□□ -0.44
GINS3-201ENST00000318129 PDE6BP35913 854 aa12.28□□□□□ -0.44
GINS3-201ENST00000318129 RPS8P62241 208 aaKnown RBP12.28□□□□□ -0.44
GINS3-201ENST00000318129 PDE4CQ08493 712 aa12.28□□□□□ -0.44
GINS3-201ENST00000318129 CRY2Q49AN0 593 aa12.28□□□□□ -0.44
GINS3-201ENST00000318129 TTC22Q5TAA0 569 aa12.28□□□□□ -0.44
GINS3-201ENST00000318129 UTP14CQ5TAP6 766 aaKnown RBP12.28□□□□□ -0.44
GINS3-201ENST00000318129 RBM17Q96I25 401 aaKnown RBP12.28□□□□□ -0.44
GINS3-201ENST00000318129 CASZ1Q86V15 1759 aa12.27□□□□□ -0.44
GINS3-201ENST00000318129 MSNP26038 577 aaKnown RBP12.27□□□□□ -0.44
GINS3-201ENST00000318129 SKOR2Q2VWA4 1001 aaPredicted RBP12.27□□□□□ -0.44
GINS3-201ENST00000318129 ECHDC1Q9NTX5 307 aa12.27□□□□□ -0.44
GINS3-201ENST00000318129 LRP5O75197 1615 aa12.27□□□□□ -0.44
GINS3-201ENST00000318129 HOXA10P31260 410 aaPredicted RBP12.27□□□□□ -0.45
GINS3-201ENST00000318129 R3HCC1Q9Y3T6 440 aaKnown RBP12.27□□□□□ -0.45
GINS3-201ENST00000318129 GLRX3O76003 335 aaKnown RBP12.26□□□□□ -0.45
GINS3-201ENST00000318129 PDE8BO95263 885 aa12.26□□□□□ -0.45
GINS3-201ENST00000318129 GRAPQ13588 217 aa12.26□□□□□ -0.45
GINS3-201ENST00000318129 GRAPLQ8TC17 118 aaPredicted RBP12.26□□□□□ -0.45
GINS3-201ENST00000318129 CRAMP1Q96RY5 1269 aa12.26□□□□□ -0.45
GINS3-201ENST00000318129 CCDC8Q9H0W5 538 aaPredicted RBP12.26□□□□□ -0.45
GINS3-201ENST00000318129 NASPP49321 788 aaPredicted RBP12.26□□□□□ -0.45
GINS3-201ENST00000318129 CELF1Q92879 486 aaKnown RBP12.26□□□□□ -0.45
GINS3-201ENST00000318129 NEUROD6Q96NK8 337 aa12.26□□□□□ -0.45
GINS3-201ENST00000318129 C22orf23Q9BZE7 217 aa12.26□□□□□ -0.45
GINS3-201ENST00000318129 ZHX1Q9UKY1 873 aaPredicted RBP12.26□□□□□ -0.45
GINS3-201ENST00000318129 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.26□□□□□ -0.45
GINS3-201ENST00000318129 TNRC6CQ9HCJ0 1690 aaKnown RBP12.26□□□□□ -0.45
GINS3-201ENST00000318129 ZNF500O60304 480 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms