RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 CHAF1AQ13111 956 aaPredicted RBP11.23□□□□□ -0.61
CAPN3-201ENST00000318023 FAM89AQ96GI7 184 aa11.23□□□□□ -0.61
CAPN3-201ENST00000318023 MYD88Q99836 296 aa11.23□□□□□ -0.61
CAPN3-201ENST00000318023 DBF4Q9UBU7 674 aaPredicted RBP11.23□□□□□ -0.61
CAPN3-201ENST00000318023 CTNNA3Q9UI47 895 aa11.23□□□□□ -0.61
CAPN3-201ENST00000318023 TM4SF1P30408 202 aa11.23□□□□□ -0.61
CAPN3-201ENST00000318023 ERFEQ4G0M1 354 aa11.23□□□□□ -0.61
CAPN3-201ENST00000318023 SUSD4Q5VX71 490 aa11.23□□□□□ -0.61
CAPN3-201ENST00000318023 DDX21Q9NR30 783 aaKnown RBP eCLIP11.23□□□□□ -0.61
CAPN3-201ENST00000318023 ST7Q9NRC1 585 aa11.23□□□□□ -0.61
CAPN3-201ENST00000318023 ANKRD13DQ6ZTN6 518 aa11.22□□□□□ -0.61
CAPN3-201ENST00000318023 PLEKHG2Q9H7P9 1386 aa11.22□□□□□ -0.61
CAPN3-201ENST00000318023 MAP3K15Q6ZN16 1313 aa11.22□□□□□ -0.61
CAPN3-201ENST00000318023 PI4KAP2A4QPH2 592 aa11.22□□□□□ -0.61
CAPN3-201ENST00000318023 PRR29P0C7W0 189 aa11.22□□□□□ -0.61
CAPN3-201ENST00000318023 TNNT3P45378 269 aaPredicted RBP11.22□□□□□ -0.61
CAPN3-201ENST00000318023 PLCB2Q00722 1185 aa11.22□□□□□ -0.61
CAPN3-201ENST00000318023 TPRNQ4KMQ1 711 aa11.22□□□□□ -0.61
CAPN3-201ENST00000318023 PI4KAP1Q8N8J0 262 aa11.22□□□□□ -0.61
CAPN3-201ENST00000318023 TRMT112Q9UI30 125 aaKnown RBP11.22□□□□□ -0.61
CAPN3-201ENST00000318023 KIF16BQ96L93 1317 aa11.22□□□□□ -0.61
CAPN3-201ENST00000318023 APPP05067 770 aa11.22□□□□□ -0.61
CAPN3-201ENST00000318023 YY1P25490 414 aa11.22□□□□□ -0.61
CAPN3-201ENST00000318023 CWF19L2Q2TBE0 894 aaKnown RBP11.22□□□□□ -0.61
CAPN3-201ENST00000318023 CALCOCO1Q9P1Z2 691 aa11.22□□□□□ -0.61
CAPN3-201ENST00000318023 TUBGCP6Q96RT7 1819 aa11.21□□□□□ -0.61
CAPN3-201ENST00000318023 LOC102724159A0A0B4J2E5 919 aa11.21□□□□□ -0.61
CAPN3-201ENST00000318023 C21orf2O43822 256 aa11.21□□□□□ -0.61
CAPN3-201ENST00000318023 HMGB2P26583 209 aaKnown RBP11.21□□□□□ -0.61
CAPN3-201ENST00000318023 PWP2Q15269 919 aaKnown RBP11.21□□□□□ -0.61
CAPN3-201ENST00000318023 CCDC30Q5VVM6 783 aa11.21□□□□□ -0.61
CAPN3-201ENST00000318023 FEZ2Q9UHY8 353 aaPredicted RBP11.21□□□□□ -0.61
CAPN3-201ENST00000318023 UBN2Q6ZU65 1347 aa11.21□□□□□ -0.61
CAPN3-201ENST00000318023 TAF1LQ8IZX4 1826 aa11.21□□□□□ -0.62
CAPN3-201ENST00000318023 TPTE2Q6XPS3 522 aa11.21□□□□□ -0.62
CAPN3-201ENST00000318023 DIAPH3Q9NSV4 1193 aa11.21□□□□□ -0.62
CAPN3-201ENST00000318023 DDX41Q9UJV9 622 aaKnown RBP11.21□□□□□ -0.62
CAPN3-201ENST00000318023 MAP3K2Q9Y2U5 619 aa11.21□□□□□ -0.62
CAPN3-201ENST00000318023 RARSP54136 660 aaKnown RBP11.2□□□□□ -0.62
CAPN3-201ENST00000318023 C3orf67Q6ZVT6 689 aa11.2□□□□□ -0.62
CAPN3-201ENST00000318023 LNPKQ9C0E8 428 aa11.2□□□□□ -0.62
CAPN3-201ENST00000318023 TSPY26PQ9H489 355 aa11.2□□□□□ -0.62
CAPN3-201ENST00000318023 H0YIN7 160 aa11.2□□□□□ -0.62
CAPN3-201ENST00000318023 ST5P78524 1137 aa11.2□□□□□ -0.62
CAPN3-201ENST00000318023 CNPY4Q8N129 248 aa11.2□□□□□ -0.62
CAPN3-201ENST00000318023 SPTLC3Q9NUV7 552 aa11.2□□□□□ -0.62
CAPN3-201ENST00000318023 EP400NLQ6ZTU2 488 aa11.2□□□□□ -0.62
CAPN3-201ENST00000318023 PYCARDQ9ULZ3 195 aa11.2□□□□□ -0.62
CAPN3-201ENST00000318023 CD2APQ9Y5K6 639 aa11.2□□□□□ -0.62
CAPN3-201ENST00000318023 UBR3Q6ZT12 1888 aa11.19□□□□□ -0.62
CAPN3-201ENST00000318023 TJP1Q07157 1748 aa11.19□□□□□ -0.62
CAPN3-201ENST00000318023 CTIFO43310 598 aaKnown RBP11.19□□□□□ -0.62
CAPN3-201ENST00000318023 VAMP4O75379 141 aa11.19□□□□□ -0.62
CAPN3-201ENST00000318023 ZGPATQ8N5A5 531 aaKnown RBP11.19□□□□□ -0.62
CAPN3-201ENST00000318023 CICQ96RK0 1608 aaPredicted RBP11.19□□□□□ -0.62
CAPN3-201ENST00000318023 ADCY5O95622 1261 aa11.19□□□□□ -0.62
CAPN3-201ENST00000318023 GIGYF2Q6Y7W6 1299 aaKnown RBP11.19□□□□□ -0.62
CAPN3-201ENST00000318023 PIM2Q9P1W9 311 aa11.19□□□□□ -0.62
CAPN3-201ENST00000318023 FOXD4L6Q3SYB3 417 aaPredicted RBP11.18□□□□□ -0.62
CAPN3-201ENST00000318023 FOXD4L3Q6VB84 417 aaPredicted RBP11.18□□□□□ -0.62
CAPN3-201ENST00000318023 WDR63Q8IWG1 891 aa11.18□□□□□ -0.62
CAPN3-201ENST00000318023 RSPH14Q9UHP6 348 aa11.18□□□□□ -0.62
CAPN3-201ENST00000318023 PSEN1P49768 467 aa11.18□□□□□ -0.62
CAPN3-201ENST00000318023 NUCB2P80303 420 aa11.18□□□□□ -0.62
CAPN3-201ENST00000318023 RASSF7Q02833 373 aa11.18□□□□□ -0.62
CAPN3-201ENST00000318023 DALRD3Q5D0E6 543 aaKnown RBP11.18□□□□□ -0.62
CAPN3-201ENST00000318023 LRP10Q7Z4F1 713 aa11.18□□□□□ -0.62
CAPN3-201ENST00000318023 HYPKQ9NX55 129 aa11.18□□□□□ -0.62
CAPN3-201ENST00000318023 RAD51AP2Q09MP3 1159 aa11.18□□□□□ -0.62
CAPN3-201ENST00000318023 FLIIQ13045 1269 aa11.18□□□□□ -0.62
CAPN3-201ENST00000318023 CCDC27Q2M243 656 aa11.18□□□□□ -0.62
CAPN3-201ENST00000318023 KIF18AQ8NI77 898 aa11.18□□□□□ -0.62
CAPN3-201ENST00000318023 SMC4Q9NTJ3 1288 aa11.18□□□□□ -0.62
CAPN3-201ENST00000318023 CHMP3Q9Y3E7 222 aa11.18□□□□□ -0.62
CAPN3-201ENST00000318023 CASZ1Q86V15 1759 aa11.17□□□□□ -0.62
CAPN3-201ENST00000318023 HNRNPH2P55795 449 aaKnown RBP11.17□□□□□ -0.62
CAPN3-201ENST00000318023 KRT222Q8N1A0 295 aa11.17□□□□□ -0.62
CAPN3-201ENST00000318023 CYP2E1P05181 493 aaPredicted RBP11.17□□□□□ -0.62
CAPN3-201ENST00000318023 KCNA3P22001 575 aa11.17□□□□□ -0.62
CAPN3-201ENST00000318023 UTP14AQ9BVJ6 771 aaKnown RBP11.17□□□□□ -0.62
CAPN3-201ENST00000318023 ABCC12Q96J65 1359 aa11.17□□□□□ -0.62
CAPN3-201ENST00000318023 RGPD3A6NKT7 1758 aaPredicted RBP11.17□□□□□ -0.62
CAPN3-201ENST00000318023 RGPD4Q7Z3J3 1758 aa11.17□□□□□ -0.62
CAPN3-201ENST00000318023 MVPQ14764 893 aaKnown RBP11.16□□□□□ -0.62
CAPN3-201ENST00000318023 NLRP10Q86W26 655 aa11.16□□□□□ -0.62
CAPN3-201ENST00000318023 TCIRG1Q13488 830 aa11.16□□□□□ -0.62
CAPN3-201ENST00000318023 SPC24Q8NBT2 197 aa11.16□□□□□ -0.62
CAPN3-201ENST00000318023 SSH1Q8WYL5 1049 aa11.16□□□□□ -0.62
CAPN3-201ENST00000318023 RPGRQ92834 1020 aaKnown RBP11.16□□□□□ -0.62
CAPN3-201ENST00000318023 BABAM1Q9NWV8 329 aa11.16□□□□□ -0.62
CAPN3-201ENST00000318023 ZDHHC9Q9Y397 364 aa11.16□□□□□ -0.62
CAPN3-201ENST00000318023 MORC2Q9Y6X9 1032 aaPredicted RBP11.16□□□□□ -0.62
CAPN3-201ENST00000318023 CLEC4GQ6UXB4 293 aa11.16□□□□□ -0.62
CAPN3-201ENST00000318023 TTLL6Q8N841 843 aa11.16□□□□□ -0.62
CAPN3-201ENST00000318023 PLBD2Q8NHP8 589 aa11.16□□□□□ -0.62
CAPN3-201ENST00000318023 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.16□□□□□ -0.62
CAPN3-201ENST00000318023 V9GYY5 206 aaPredicted RBP11.16□□□□□ -0.62
CAPN3-201ENST00000318023 UBE3BQ7Z3V4 1068 aa11.15□□□□□ -0.62
CAPN3-201ENST00000318023 C16orf45Q96MC5 204 aaPredicted RBP11.15□□□□□ -0.62
CAPN3-201ENST00000318023 KCNF1Q9H3M0 494 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms