RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 RPS8P62241 208 aaKnown RBP19.02■□□□□ 0.64
PDLIM5-202ENST00000318007 NUCB1Q02818 461 aa19.02■□□□□ 0.64
PDLIM5-202ENST00000318007 WTIPA6NIX2 430 aaPredicted RBP19.01■□□□□ 0.63
PDLIM5-202ENST00000318007 GRAPQ13588 217 aa19.01■□□□□ 0.63
PDLIM5-202ENST00000318007 GRAPLQ8TC17 118 aaPredicted RBP19.01■□□□□ 0.63
PDLIM5-202ENST00000318007 KIF1BPQ96EK5 621 aa19.01■□□□□ 0.63
PDLIM5-202ENST00000318007 RTL9Q8NET4 1388 aa19■□□□□ 0.63
PDLIM5-202ENST00000318007 DPEP1P16444 411 aa19■□□□□ 0.63
PDLIM5-202ENST00000318007 HSP90AB4PQ58FF6 505 aa19■□□□□ 0.63
PDLIM5-202ENST00000318007 CCDC8Q9H0W5 538 aaPredicted RBP19■□□□□ 0.63
PDLIM5-202ENST00000318007 TLR7Q9NYK1 1049 aaKnown RBP19■□□□□ 0.63
PDLIM5-202ENST00000318007 RIC1Q4ADV7 1423 aa19■□□□□ 0.63
PDLIM5-202ENST00000318007 KLRG2A4D1S0 409 aaPredicted RBP18.99■□□□□ 0.63
PDLIM5-202ENST00000318007 NPR1P16066 1061 aa18.99■□□□□ 0.63
PDLIM5-202ENST00000318007 PDE4AP27815 886 aa18.99■□□□□ 0.63
PDLIM5-202ENST00000318007 IL15P40933 162 aaPredicted RBP18.99■□□□□ 0.63
PDLIM5-202ENST00000318007 CHRNDQ07001 517 aa18.99■□□□□ 0.63
PDLIM5-202ENST00000318007 AACSQ86V21 672 aa18.99■□□□□ 0.63
PDLIM5-202ENST00000318007 MASTLQ96GX5 879 aa18.99■□□□□ 0.63
PDLIM5-202ENST00000318007 RIPOR2Q9Y4F9 1068 aa18.99■□□□□ 0.63
PDLIM5-202ENST00000318007 RAB11FIP3O75154 756 aa18.99■□□□□ 0.63
PDLIM5-202ENST00000318007 NEUROD6Q96NK8 337 aa18.99■□□□□ 0.63
PDLIM5-202ENST00000318007 TIMM10P62072 90 aa18.98■□□□□ 0.63
PDLIM5-202ENST00000318007 ERC1Q8IUD2 1116 aa18.98■□□□□ 0.63
PDLIM5-202ENST00000318007 CEP126Q9P2H0 1117 aa18.98■□□□□ 0.63
PDLIM5-202ENST00000318007 LRP5O75197 1615 aa18.97■□□□□ 0.63
PDLIM5-202ENST00000318007 PPEF1O14829 653 aaPredicted RBP18.97■□□□□ 0.63
PDLIM5-202ENST00000318007 NLGN2Q8NFZ4 835 aa18.97■□□□□ 0.63
PDLIM5-202ENST00000318007 EAF2Q96CJ1 260 aaPredicted RBP18.97■□□□□ 0.63
PDLIM5-202ENST00000318007 BSDC1Q9NW68 430 aaPredicted RBP18.97■□□□□ 0.63
PDLIM5-202ENST00000318007 ANKIB1Q9P2G1 1089 aa18.97■□□□□ 0.63
PDLIM5-202ENST00000318007 MINPP1Q9UNW1 487 aa18.97■□□□□ 0.63
PDLIM5-202ENST00000318007 CIAO1O76071 339 aa18.97■□□□□ 0.63
PDLIM5-202ENST00000318007 PRPF40BQ6NWY9 871 aaKnown RBP18.97■□□□□ 0.63
PDLIM5-202ENST00000318007 CLASRPQ8N2M8 674 aaKnown RBP18.97■□□□□ 0.63
PDLIM5-202ENST00000318007 GPR101Q96P66 508 aaPredicted RBP18.96■□□□□ 0.63
PDLIM5-202ENST00000318007 HOXA10P31260 410 aaPredicted RBP18.95■□□□□ 0.62
PDLIM5-202ENST00000318007 TNNI3KQ59H18 835 aa18.95■□□□□ 0.62
PDLIM5-202ENST00000318007 NSFL1CQ9UNZ2 370 aaKnown RBP18.95■□□□□ 0.62
PDLIM5-202ENST00000318007 FPGT-TNNI3KV9GXZ4 949 aa18.95■□□□□ 0.62
PDLIM5-202ENST00000318007 A0A1B0GUL7 405 aa18.95■□□□□ 0.62
PDLIM5-202ENST00000318007 IFIT2P09913 472 aaKnown RBP18.95■□□□□ 0.62
PDLIM5-202ENST00000318007 ALDH1B1P30837 517 aa18.95■□□□□ 0.62
PDLIM5-202ENST00000318007 CRAMP1Q96RY5 1269 aa18.95■□□□□ 0.62
PDLIM5-202ENST00000318007 FHDC1Q9C0D6 1143 aaPredicted RBP18.95■□□□□ 0.62
PDLIM5-202ENST00000318007 PDE8BO95263 885 aa18.94■□□□□ 0.62
PDLIM5-202ENST00000318007 KCNA3P22001 575 aa18.94■□□□□ 0.62
PDLIM5-202ENST00000318007 ADORA1P30542 326 aa18.94■□□□□ 0.62
PDLIM5-202ENST00000318007 MROH5Q6ZUA9 1318 aa18.94■□□□□ 0.62
PDLIM5-202ENST00000318007 KCNJ4P48050 445 aa18.93■□□□□ 0.62
PDLIM5-202ENST00000318007 VGLL2Q8N8G2 317 aa18.93■□□□□ 0.62
PDLIM5-202ENST00000318007 DBNDD2Q9BQY9 259 aa18.93■□□□□ 0.62
PDLIM5-202ENST00000318007 SLX4Q8IY92 1834 aa18.93■□□□□ 0.62
PDLIM5-202ENST00000318007 C21orf2O43822 256 aa18.93■□□□□ 0.62
PDLIM5-202ENST00000318007 KLRK1P26718 216 aa18.93■□□□□ 0.62
PDLIM5-202ENST00000318007 ATP2B3Q16720 1220 aa18.93■□□□□ 0.62
PDLIM5-202ENST00000318007 GPSM2P81274 684 aa18.92■□□□□ 0.62
PDLIM5-202ENST00000318007 STYK1Q6J9G0 422 aa18.92■□□□□ 0.62
PDLIM5-202ENST00000318007 DBNLQ9UJU6 430 aaKnown RBP18.92■□□□□ 0.62
PDLIM5-202ENST00000318007 ZNF609O15014 1411 aa18.92■□□□□ 0.62
PDLIM5-202ENST00000318007 KIF13BQ9NQT8 1826 aa18.92■□□□□ 0.62
PDLIM5-202ENST00000318007 BBOX1O75936 387 aa18.92■□□□□ 0.62
PDLIM5-202ENST00000318007 FBXO3Q9UK99 471 aa18.92■□□□□ 0.62
PDLIM5-202ENST00000318007 MAP4K4O95819 1239 aaPredicted RBP18.91■□□□□ 0.62
PDLIM5-202ENST00000318007 MX1P20591 662 aa18.91■□□□□ 0.62
PDLIM5-202ENST00000318007 PUM3Q15397 648 aaKnown RBP18.91■□□□□ 0.62
PDLIM5-202ENST00000318007 TTLL6Q8N841 843 aa18.91■□□□□ 0.62
PDLIM5-202ENST00000318007 CNKSR1Q969H4 720 aa18.91■□□□□ 0.62
PDLIM5-202ENST00000318007 NDUFB9Q9Y6M9 179 aa18.91■□□□□ 0.62
PDLIM5-202ENST00000318007 TGFB2P61812 414 aa18.9■□□□□ 0.62
PDLIM5-202ENST00000318007 GORABQ5T7V8 394 aa18.9■□□□□ 0.62
PDLIM5-202ENST00000318007 PLEKHM2Q8IWE5 1019 aa18.9■□□□□ 0.62
PDLIM5-202ENST00000318007 BCS1LQ9Y276 419 aa18.9■□□□□ 0.62
PDLIM5-202ENST00000318007 UFL1O94874 794 aa18.9■□□□□ 0.62
PDLIM5-202ENST00000318007 XAGE2Q96GT9 111 aa18.9■□□□□ 0.62
PDLIM5-202ENST00000318007 IQSEC3Q9UPP2 1182 aaPredicted RBP18.9■□□□□ 0.62
PDLIM5-202ENST00000318007 ATP6V0A2Q9Y487 856 aa18.9■□□□□ 0.62
PDLIM5-202ENST00000318007 CD2APQ9Y5K6 639 aa18.9■□□□□ 0.62
PDLIM5-202ENST00000318007 KIAA1551Q9HCM1 1747 aa18.9■□□□□ 0.62
PDLIM5-202ENST00000318007 A0A1B0GUL6 1792 aa18.89■□□□□ 0.61
PDLIM5-202ENST00000318007 C6orf229H3BNL8 230 aa18.89■□□□□ 0.61
PDLIM5-202ENST00000318007 PELP1Q8IZL8 1130 aaKnown RBP18.89■□□□□ 0.61
PDLIM5-202ENST00000318007 TMX4Q9H1E5 349 aaPredicted RBP18.89■□□□□ 0.61
PDLIM5-202ENST00000318007 PIM2Q9P1W9 311 aa18.89■□□□□ 0.61
PDLIM5-202ENST00000318007 AKAP2Q9Y2D5 859 aa18.89■□□□□ 0.61
PDLIM5-202ENST00000318007 GYG1P46976 350 aa18.88■□□□□ 0.61
PDLIM5-202ENST00000318007 XDHP47989 1333 aa18.88■□□□□ 0.61
PDLIM5-202ENST00000318007 DLEC1Q9Y238 1755 aa18.88■□□□□ 0.61
PDLIM5-202ENST00000318007 PDE1AP54750 535 aa18.88■□□□□ 0.61
PDLIM5-202ENST00000318007 TXNRD3Q86VQ6 643 aa18.88■□□□□ 0.61
PDLIM5-202ENST00000318007 ZNF804BA4D1E1 1349 aa18.87■□□□□ 0.61
PDLIM5-202ENST00000318007 RIMBP2O15034 1052 aa18.87■□□□□ 0.61
PDLIM5-202ENST00000318007 SLC5A1P13866 664 aa18.87■□□□□ 0.61
PDLIM5-202ENST00000318007 DPP8Q6V1X1 898 aaPredicted RBP18.87■□□□□ 0.61
PDLIM5-202ENST00000318007 SP8Q8IXZ3 490 aa18.87■□□□□ 0.61
PDLIM5-202ENST00000318007 LPIN2Q92539 896 aa18.87■□□□□ 0.61
PDLIM5-202ENST00000318007 ANKRD2Q9GZV1 360 aa18.87■□□□□ 0.61
PDLIM5-202ENST00000318007 POLLQ9UGP5 575 aa18.87■□□□□ 0.61
PDLIM5-202ENST00000318007 BCAMP50895 628 aa18.86■□□□□ 0.61
PDLIM5-202ENST00000318007 DALRD3Q5D0E6 543 aaKnown RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms