RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 U3KPZ7 1027 aaPredicted RBP17.73■□□□□ 0.43
CHFR-202ENST00000315585 BCL9LQ86UU0 1499 aa17.73■□□□□ 0.43
CHFR-202ENST00000315585 RPS6KB1P23443 525 aa17.73■□□□□ 0.43
CHFR-202ENST00000315585 CHMP4CQ96CF2 233 aa17.73■□□□□ 0.43
CHFR-202ENST00000315585 TLR7Q9NYK1 1049 aaKnown RBP17.73■□□□□ 0.43
CHFR-202ENST00000315585 A0A0D9SFI3 127 aa17.72■□□□□ 0.43
CHFR-202ENST00000315585 LARP1BQ659C4 914 aaKnown RBP17.72■□□□□ 0.43
CHFR-202ENST00000315585 CERKQ8TCT0 537 aa17.72■□□□□ 0.43
CHFR-202ENST00000315585 ACSBG1Q96GR2 724 aa17.72■□□□□ 0.43
CHFR-202ENST00000315585 HMGB1P09429 215 aaKnown RBP17.72■□□□□ 0.43
CHFR-202ENST00000315585 ME3Q16798 604 aa17.72■□□□□ 0.43
CHFR-202ENST00000315585 FAM98CQ17RN3 349 aaKnown RBP17.72■□□□□ 0.43
CHFR-202ENST00000315585 ZBTB38Q8NAP3 1195 aaPredicted RBP17.72■□□□□ 0.43
CHFR-202ENST00000315585 CHAMP1Q96JM3 812 aa17.72■□□□□ 0.43
CHFR-202ENST00000315585 HAUS7Q99871 368 aa17.72■□□□□ 0.43
CHFR-202ENST00000315585 PLA2G12BQ9BX93 195 aa17.72■□□□□ 0.43
CHFR-202ENST00000315585 MTMR6Q9Y217 621 aa17.72■□□□□ 0.43
CHFR-202ENST00000315585 ZBTB1Q9Y2K1 713 aa17.72■□□□□ 0.43
CHFR-202ENST00000315585 CICQ96RK0 1608 aaPredicted RBP17.71■□□□□ 0.43
CHFR-202ENST00000315585 ATP6V1AP38606 617 aa17.71■□□□□ 0.43
CHFR-202ENST00000315585 TFCP2Q12800 502 aa17.71■□□□□ 0.43
CHFR-202ENST00000315585 DBNLQ9UJU6 430 aaKnown RBP17.71■□□□□ 0.43
CHFR-202ENST00000315585 FBXO3Q9UK99 471 aa17.71■□□□□ 0.43
CHFR-202ENST00000315585 CNPY2Q9Y2B0 182 aa17.71■□□□□ 0.43
CHFR-202ENST00000315585 TAF5LO75529 589 aa17.71■□□□□ 0.43
CHFR-202ENST00000315585 CPA1P15085 419 aa17.71■□□□□ 0.43
CHFR-202ENST00000315585 KRT85P78386 507 aa17.71■□□□□ 0.43
CHFR-202ENST00000315585 LRRFIP1Q32MZ4 808 aaKnown RBP17.71■□□□□ 0.43
CHFR-202ENST00000315585 FOXD4L6Q3SYB3 417 aaPredicted RBP17.71■□□□□ 0.43
CHFR-202ENST00000315585 MCMDC2Q4G0Z9 681 aa17.71■□□□□ 0.43
CHFR-202ENST00000315585 FOXD4L3Q6VB84 417 aaPredicted RBP17.71■□□□□ 0.43
CHFR-202ENST00000315585 KLHDC4Q8TBB5 520 aa17.71■□□□□ 0.43
CHFR-202ENST00000315585 GDPD2Q9HCC8 539 aa17.71■□□□□ 0.43
CHFR-202ENST00000315585 CCDC87Q9NVE4 849 aa17.71■□□□□ 0.43
CHFR-202ENST00000315585 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.71■□□□□ 0.42
CHFR-202ENST00000315585 LOC102724428A0A0B4J2F2 783 aa17.7■□□□□ 0.42
CHFR-202ENST00000315585 IL15P40933 162 aaPredicted RBP17.7■□□□□ 0.42
CHFR-202ENST00000315585 SIK1P57059 783 aa17.7■□□□□ 0.42
CHFR-202ENST00000315585 DZIP3Q86Y13 1208 aaKnown RBP17.7■□□□□ 0.42
CHFR-202ENST00000315585 USP21Q9UK80 565 aa17.7■□□□□ 0.42
CHFR-202ENST00000315585 TPCN1Q9ULQ1 816 aa17.7■□□□□ 0.42
CHFR-202ENST00000315585 CDHR2Q9BYE9 1310 aa17.7■□□□□ 0.42
CHFR-202ENST00000315585 GADD45BO75293 160 aaPredicted RBP17.7■□□□□ 0.42
CHFR-202ENST00000315585 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.7■□□□□ 0.42
CHFR-202ENST00000315585 AEBP2Q6ZN18 517 aaPredicted RBP17.7■□□□□ 0.42
CHFR-202ENST00000315585 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.7■□□□□ 0.42
CHFR-202ENST00000315585 PALLDQ8WX93 1383 aa17.69■□□□□ 0.42
CHFR-202ENST00000315585 CIAO1O76071 339 aa17.69■□□□□ 0.42
CHFR-202ENST00000315585 VPS37CA5D8V6 355 aaPredicted RBP17.69■□□□□ 0.42
CHFR-202ENST00000315585 LARGE1O95461 756 aa17.69■□□□□ 0.42
CHFR-202ENST00000315585 CCDC57Q2TAC2 916 aa17.69■□□□□ 0.42
CHFR-202ENST00000315585 NEK1Q96PY6 1258 aa17.69■□□□□ 0.42
CHFR-202ENST00000315585 LARP6Q9BRS8 491 aaKnown RBP17.69■□□□□ 0.42
CHFR-202ENST00000315585 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.69■□□□□ 0.42
CHFR-202ENST00000315585 ANKRD36CQ5JPF3 1778 aa17.68■□□□□ 0.42
CHFR-202ENST00000315585 FIBPO43427 364 aa17.68■□□□□ 0.42
CHFR-202ENST00000315585 KBTBD3Q8NAB2 608 aa17.68■□□□□ 0.42
CHFR-202ENST00000315585 SCAND2PQ9GZW5 306 aaPredicted RBP17.68■□□□□ 0.42
CHFR-202ENST00000315585 HELLSQ9NRZ9 838 aa17.68■□□□□ 0.42
CHFR-202ENST00000315585 ELP1O95163 1332 aa17.68■□□□□ 0.42
CHFR-202ENST00000315585 ZNF500O60304 480 aaPredicted RBP17.68■□□□□ 0.42
CHFR-202ENST00000315585 NLRP10Q86W26 655 aa17.68■□□□□ 0.42
CHFR-202ENST00000315585 SH3TC1Q8TE82 1336 aa17.67■□□□□ 0.42
CHFR-202ENST00000315585 EIF5P55010 431 aaKnown RBP17.67■□□□□ 0.42
CHFR-202ENST00000315585 MEX3CQ5U5Q3 659 aaKnown RBP17.67■□□□□ 0.42
CHFR-202ENST00000315585 KIF3AQ9Y496 699 aa17.67■□□□□ 0.42
CHFR-202ENST00000315585 EYA2O00167 538 aa17.67■□□□□ 0.42
CHFR-202ENST00000315585 CRKLP46109 303 aaKnown RBP17.67■□□□□ 0.42
CHFR-202ENST00000315585 HLFQ16534 295 aa17.67■□□□□ 0.42
CHFR-202ENST00000315585 DNAJC2Q99543 621 aaKnown RBP17.67■□□□□ 0.42
CHFR-202ENST00000315585 ZKSCAN5Q9Y2L8 839 aa17.67■□□□□ 0.42
CHFR-202ENST00000315585 ZNF831Q5JPB2 1677 aa17.66■□□□□ 0.42
CHFR-202ENST00000315585 TERF1P54274 439 aa17.66■□□□□ 0.42
CHFR-202ENST00000315585 RNF214Q8ND24 703 aa17.66■□□□□ 0.42
CHFR-202ENST00000315585 DBNDD2Q9BQY9 259 aa17.66■□□□□ 0.42
CHFR-202ENST00000315585 DNM1Q05193 864 aaKnown RBP17.66■□□□□ 0.42
CHFR-202ENST00000315585 INTS5Q6P9B9 1019 aaKnown RBP17.66■□□□□ 0.42
CHFR-202ENST00000315585 ZNF589Q86UQ0 364 aaPredicted RBP17.66■□□□□ 0.42
CHFR-202ENST00000315585 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.66■□□□□ 0.42
CHFR-202ENST00000315585 RREB1Q92766 1687 aa17.65■□□□□ 0.42
CHFR-202ENST00000315585 PTMAP06454 111 aaKnown RBP17.65■□□□□ 0.42
CHFR-202ENST00000315585 CSF1RP07333 972 aa17.65■□□□□ 0.42
CHFR-202ENST00000315585 TPM2P07951 284 aa17.65■□□□□ 0.42
CHFR-202ENST00000315585 HSP90B1P14625 803 aaKnown RBP17.65■□□□□ 0.42
CHFR-202ENST00000315585 NECAB1Q8N987 351 aa17.65■□□□□ 0.42
CHFR-202ENST00000315585 FAM89AQ96GI7 184 aa17.65■□□□□ 0.42
CHFR-202ENST00000315585 AK7Q96M32 723 aa17.65■□□□□ 0.42
CHFR-202ENST00000315585 TCHHQ07283 1943 aa17.65■□□□□ 0.42
CHFR-202ENST00000315585 OFD1O75665 1012 aa17.64■□□□□ 0.42
CHFR-202ENST00000315585 IFIT5Q13325 482 aaKnown RBP17.64■□□□□ 0.42
CHFR-202ENST00000315585 TAF7LQ5H9L4 462 aa17.64■□□□□ 0.42
CHFR-202ENST00000315585 DSCC1Q9BVC3 393 aa17.64■□□□□ 0.42
CHFR-202ENST00000315585 TRMT112Q9UI30 125 aaKnown RBP17.64■□□□□ 0.42
CHFR-202ENST00000315585 GOLGA6L4A6NEF3 574 aa17.64■□□□□ 0.41
CHFR-202ENST00000315585 GPTP24298 496 aa17.64■□□□□ 0.41
CHFR-202ENST00000315585 ATG9AQ7Z3C6 839 aa17.64■□□□□ 0.41
CHFR-202ENST00000315585 ZNF34Q8IZ26 560 aa17.64■□□□□ 0.41
CHFR-202ENST00000315585 LLPHQ9BRT6 129 aaKnown RBP17.64■□□□□ 0.41
CHFR-202ENST00000315585 TBC1D2BQ9UPU7 963 aa17.64■□□□□ 0.41
CHFR-202ENST00000315585 NUP98P52948 1817 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms