RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 IL15P40933 162 aaPredicted RBP15.7■□□□□ 0.1
CHMP2A-201ENST00000312547 SIL1Q9H173 461 aa15.7■□□□□ 0.1
CHMP2A-201ENST00000312547 RWDD1Q9H446 243 aaPredicted RBP15.7■□□□□ 0.1
CHMP2A-201ENST00000312547 BRCA1P38398 1863 aaKnown RBP15.69■□□□□ 0.1
CHMP2A-201ENST00000312547 SLX4Q8IY92 1834 aa15.69■□□□□ 0.1
CHMP2A-201ENST00000312547 CC2D2BQ6DHV5 1058 aa15.69■□□□□ 0.1
CHMP2A-201ENST00000312547 OLFM4Q6UX06 510 aa15.69■□□□□ 0.1
CHMP2A-201ENST00000312547 VGLL2Q8N8G2 317 aa15.69■□□□□ 0.1
CHMP2A-201ENST00000312547 ZNF784Q8NCA9 323 aaPredicted RBP15.69■□□□□ 0.1
CHMP2A-201ENST00000312547 CNNM1Q9NRU3 951 aa15.69■□□□□ 0.1
CHMP2A-201ENST00000312547 EXOC6BQ9Y2D4 811 aa15.69■□□□□ 0.1
CHMP2A-201ENST00000312547 TAF1P21675 1872 aa15.69■□□□□ 0.1
CHMP2A-201ENST00000312547 MROH5Q6ZUA9 1318 aa15.68■□□□□ 0.1
CHMP2A-201ENST00000312547 C21orf2O43822 256 aa15.68■□□□□ 0.1
CHMP2A-201ENST00000312547 CHRNDQ07001 517 aa15.68■□□□□ 0.1
CHMP2A-201ENST00000312547 G3BP1Q13283 466 aaKnown RBP eCLIP15.68■□□□□ 0.1
CHMP2A-201ENST00000312547 HSP90AB4PQ58FF6 505 aa15.68■□□□□ 0.1
CHMP2A-201ENST00000312547 PODXL2Q9NZ53 605 aa15.68■□□□□ 0.1
CHMP2A-201ENST00000312547 WWC3Q9ULE0 1092 aa15.68■□□□□ 0.1
CHMP2A-201ENST00000312547 BCS1LQ9Y276 419 aa15.68■□□□□ 0.1
CHMP2A-201ENST00000312547 LRRC37AA6NMS7 1700 aa15.68■□□□□ 0.1
CHMP2A-201ENST00000312547 DCAF8L1A6NGE4 600 aa15.67■□□□□ 0.1
CHMP2A-201ENST00000312547 RAB11FIP3O75154 756 aa15.67■□□□□ 0.1
CHMP2A-201ENST00000312547 SASH1O94885 1247 aa15.67■□□□□ 0.1
CHMP2A-201ENST00000312547 GPSM2P81274 684 aa15.67■□□□□ 0.1
CHMP2A-201ENST00000312547 SMC5Q8IY18 1101 aa15.67■□□□□ 0.1
CHMP2A-201ENST00000312547 ANKRD2Q9GZV1 360 aa15.67■□□□□ 0.1
CHMP2A-201ENST00000312547 GRIPAP1Q4V328 841 aa15.66■□□□□ 0.1
CHMP2A-201ENST00000312547 CCDC93Q567U6 631 aa15.66■□□□□ 0.1
CHMP2A-201ENST00000312547 METTL24Q5JXM2 366 aa15.66■□□□□ 0.1
CHMP2A-201ENST00000312547 SOGA3Q5TF21 947 aa15.66■□□□□ 0.1
CHMP2A-201ENST00000312547 ERC1Q8IUD2 1116 aa15.66■□□□□ 0.1
CHMP2A-201ENST00000312547 PPP4R2Q9NY27 417 aa15.66■□□□□ 0.1
CHMP2A-201ENST00000312547 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.66■□□□□ 0.1
CHMP2A-201ENST00000312547 XDHP47989 1333 aa15.66■□□□□ 0.1
CHMP2A-201ENST00000312547 PDE8BO95263 885 aa15.65■□□□□ 0.1
CHMP2A-201ENST00000312547 YBX3P16989 372 aaKnown RBP eCLIP15.65■□□□□ 0.11e-11■□□□□ 11
CHMP2A-201ENST00000312547 TFCP2Q12800 502 aa15.65■□□□□ 0.1
CHMP2A-201ENST00000312547 HELBQ8NG08 1087 aaPredicted RBP15.65■□□□□ 0.1
CHMP2A-201ENST00000312547 RHPN1Q8TCX5 695 aa15.65■□□□□ 0.1
CHMP2A-201ENST00000312547 GCC1Q96CN9 775 aa15.65■□□□□ 0.1
CHMP2A-201ENST00000312547 RTFDC1Q9BY42 306 aaPredicted RBP15.65■□□□□ 0.1
CHMP2A-201ENST00000312547 CEP126Q9P2H0 1117 aa15.65■□□□□ 0.1
CHMP2A-201ENST00000312547 ZNF219Q9P2Y4 722 aaPredicted RBP15.65■□□□□ 0.1
CHMP2A-201ENST00000312547 KDM2BQ8NHM5 1336 aa15.65■□□□□ 0.1
CHMP2A-201ENST00000312547 CEP350Q5VT06 3117 aa15.64■□□□□ 0.09
CHMP2A-201ENST00000312547 TAF5LO75529 589 aa15.64■□□□□ 0.09
CHMP2A-201ENST00000312547 FGFR2P21802 821 aa15.64■□□□□ 0.09
CHMP2A-201ENST00000312547 OS9Q13438 667 aaPredicted RBP15.64■□□□□ 0.09
CHMP2A-201ENST00000312547 LTBP1Q14766 1721 aa15.64■□□□□ 0.09
CHMP2A-201ENST00000312547 RTKN2Q8IZC4 609 aa15.64■□□□□ 0.09
CHMP2A-201ENST00000312547 MPNDQ8N594 471 aa15.64■□□□□ 0.09
CHMP2A-201ENST00000312547 KIF1BPQ96EK5 621 aa15.64■□□□□ 0.09
CHMP2A-201ENST00000312547 TMX4Q9H1E5 349 aaPredicted RBP15.64■□□□□ 0.09
CHMP2A-201ENST00000312547 ANKIB1Q9P2G1 1089 aa15.64■□□□□ 0.09
CHMP2A-201ENST00000312547 NSFL1CQ9UNZ2 370 aaKnown RBP15.64■□□□□ 0.09
CHMP2A-201ENST00000312547 LEMD3Q9Y2U8 911 aa15.64■□□□□ 0.09
CHMP2A-201ENST00000312547 DUOX1Q9NRD9 1551 aa15.63■□□□□ 0.09
CHMP2A-201ENST00000312547 WTIPA6NIX2 430 aaPredicted RBP15.63■□□□□ 0.09
CHMP2A-201ENST00000312547 ATP2B4P23634 1241 aa15.63■□□□□ 0.09
CHMP2A-201ENST00000312547 DPP8Q6V1X1 898 aaPredicted RBP15.63■□□□□ 0.09
CHMP2A-201ENST00000312547 TBC1D16Q8TBP0 767 aa15.63■□□□□ 0.09
CHMP2A-201ENST00000312547 PSMD1Q99460 953 aa15.63■□□□□ 0.09
CHMP2A-201ENST00000312547 GPR108Q9NPR9 543 aa15.63■□□□□ 0.09
CHMP2A-201ENST00000312547 POLLQ9UGP5 575 aa15.63■□□□□ 0.09
CHMP2A-201ENST00000312547 IRS2Q9Y4H2 1338 aa15.63■□□□□ 0.09
CHMP2A-201ENST00000312547 SPEF2Q9C093 1822 aa15.62■□□□□ 0.09
CHMP2A-201ENST00000312547 SNAP23O00161 211 aa15.62■□□□□ 0.09
CHMP2A-201ENST00000312547 NFKBIEO00221 500 aa15.62■□□□□ 0.09
CHMP2A-201ENST00000312547 UBE4AQ14139 1066 aa15.62■□□□□ 0.09
CHMP2A-201ENST00000312547 PUM3Q15397 648 aaKnown RBP15.62■□□□□ 0.09
CHMP2A-201ENST00000312547 CCDC136Q96JN2 1154 aa15.62■□□□□ 0.09
CHMP2A-201ENST00000312547 LRRCC1Q9C099 1032 aa15.62■□□□□ 0.09
CHMP2A-201ENST00000312547 GGA1Q9UJY5 639 aa15.62■□□□□ 0.09
CHMP2A-201ENST00000312547 ZNF804BA4D1E1 1349 aa15.62■□□□□ 0.09
CHMP2A-201ENST00000312547 LTBP3Q9NS15 1303 aa15.62■□□□□ 0.09
CHMP2A-201ENST00000312547 UFL1O94874 794 aa15.61■□□□□ 0.09
CHMP2A-201ENST00000312547 FKBP4Q02790 459 aaKnown RBP eCLIP15.61■□□□□ 0.09
CHMP2A-201ENST00000312547 B4GALNT3Q6L9W6 998 aa15.61■□□□□ 0.09
CHMP2A-201ENST00000312547 C15orf52Q6ZUT6 534 aaKnown RBP15.61■□□□□ 0.09
CHMP2A-201ENST00000312547 LPIN2Q92539 896 aa15.61■□□□□ 0.09
CHMP2A-201ENST00000312547 AKAP2Q9Y2D5 859 aa15.61■□□□□ 0.09
CHMP2A-201ENST00000312547 ARFGEF1Q9Y6D6 1849 aa15.61■□□□□ 0.09
CHMP2A-201ENST00000312547 ZNF609O15014 1411 aa15.6■□□□□ 0.09
CHMP2A-201ENST00000312547 APBB1O00213 710 aa15.6■□□□□ 0.09
CHMP2A-201ENST00000312547 ATP2B3Q16720 1220 aa15.6■□□□□ 0.09
CHMP2A-201ENST00000312547 TNNI3KQ59H18 835 aa15.6■□□□□ 0.09
CHMP2A-201ENST00000312547 CENPQQ7L2Z9 268 aaPredicted RBP15.6■□□□□ 0.09
CHMP2A-201ENST00000312547 EAF2Q96CJ1 260 aaPredicted RBP15.6■□□□□ 0.09
CHMP2A-201ENST00000312547 IL1RAPL2Q9NP60 686 aa15.6■□□□□ 0.09
CHMP2A-201ENST00000312547 FPGT-TNNI3KV9GXZ4 949 aa15.6■□□□□ 0.09
CHMP2A-201ENST00000312547 CACNA1SQ13698 1873 aa15.6■□□□□ 0.09
CHMP2A-201ENST00000312547 A0A1B0GUL6 1792 aa15.59■□□□□ 0.09
CHMP2A-201ENST00000312547 A0A1B0GUL7 405 aa15.59■□□□□ 0.09
CHMP2A-201ENST00000312547 SMARCA5O60264 1052 aaPredicted RBP15.59■□□□□ 0.09
CHMP2A-201ENST00000312547 KLRK1P26718 216 aa15.59■□□□□ 0.09
CHMP2A-201ENST00000312547 NUCB1Q02818 461 aa15.59■□□□□ 0.09
CHMP2A-201ENST00000312547 SUPT20HQ8NEM7 779 aa15.59■□□□□ 0.09
CHMP2A-201ENST00000312547 TAOK3Q9H2K8 898 aa15.59■□□□□ 0.09
CHMP2A-201ENST00000312547 MED23Q9ULK4 1368 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms