RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 VAV2P52735 878 aa15.57■□□□□ 0.08
CLCN6-201ENST00000312413 LMBR1Q8WVP7 490 aa15.57■□□□□ 0.08
CLCN6-201ENST00000312413 SELENOSQ9BQE4 189 aa15.57■□□□□ 0.08
CLCN6-201ENST00000312413 TMOD3Q9NYL9 352 aa15.57■□□□□ 0.08
CLCN6-201ENST00000312413 PIK3R4Q99570 1358 aa15.57■□□□□ 0.08
CLCN6-201ENST00000312413 BICRAQ9NZM4 1560 aa15.57■□□□□ 0.08
CLCN6-201ENST00000312413 CFAP57Q96MR6 1250 aa15.57■□□□□ 0.08
CLCN6-201ENST00000312413 MBIPQ9NS73 344 aa15.57■□□□□ 0.08
CLCN6-201ENST00000312413 NPHP3Q7Z494 1330 aa15.56■□□□□ 0.08
CLCN6-201ENST00000312413 GRIPAP1Q4V328 841 aa15.56■□□□□ 0.08
CLCN6-201ENST00000312413 CCDC42Q96M95 316 aa15.56■□□□□ 0.08
CLCN6-201ENST00000312413 TCEANC2Q96MN5 208 aa15.56■□□□□ 0.08
CLCN6-201ENST00000312413 ANKIB1Q9P2G1 1089 aa15.56■□□□□ 0.08
CLCN6-201ENST00000312413 GBP6Q6ZN66 633 aa15.56■□□□□ 0.08
CLCN6-201ENST00000312413 VAT1LQ9HCJ6 419 aa15.56■□□□□ 0.08
CLCN6-201ENST00000312413 WTAPQ15007 396 aa15.56■□□□□ 0.08
CLCN6-201ENST00000312413 FAM76AQ8TAV0 307 aa15.56■□□□□ 0.08
CLCN6-201ENST00000312413 MARCKSP29966 332 aaPredicted RBP15.56■□□□□ 0.08
CLCN6-201ENST00000312413 MPRIPQ6WCQ1 1025 aa15.56■□□□□ 0.08
CLCN6-201ENST00000312413 HDXQ7Z353 690 aa15.56■□□□□ 0.08
CLCN6-201ENST00000312413 ANKRD24Q8TF21 1146 aa15.56■□□□□ 0.08
CLCN6-201ENST00000312413 SPTLC2O15270 562 aa15.55■□□□□ 0.08
CLCN6-201ENST00000312413 RHOXF2BP0C7M4 288 aa15.55■□□□□ 0.08
CLCN6-201ENST00000312413 KARSQ15046 597 aaKnown RBP15.55■□□□□ 0.08
CLCN6-201ENST00000312413 ZNF569Q5MCW4 686 aa15.55■□□□□ 0.08
CLCN6-201ENST00000312413 RHOXF2Q9BQY4 288 aa15.55■□□□□ 0.08
CLCN6-201ENST00000312413 PPP1R1BQ9UD71 204 aaPredicted RBP15.55■□□□□ 0.08
CLCN6-201ENST00000312413 ATP2A1O14983 1001 aa15.55■□□□□ 0.08
CLCN6-201ENST00000312413 KRT13P13646 458 aa15.55■□□□□ 0.08
CLCN6-201ENST00000312413 CAPZA3Q96KX2 299 aa15.55■□□□□ 0.08
CLCN6-201ENST00000312413 LZTFL1Q9NQ48 299 aa15.55■□□□□ 0.08
CLCN6-201ENST00000312413 LDHAL6AQ6ZMR3 332 aa15.55■□□□□ 0.08
CLCN6-201ENST00000312413 RSRC1Q96IZ7 334 aaKnown RBP15.55■□□□□ 0.08
CLCN6-201ENST00000312413 LRRC2Q9BYS8 371 aa15.55■□□□□ 0.08
CLCN6-201ENST00000312413 GUCA1BQ9UMX6 200 aa15.55■□□□□ 0.08
CLCN6-201ENST00000312413 SNAPC4Q5SXM2 1469 aa15.55■□□□□ 0.08
CLCN6-201ENST00000312413 TMTC2Q8N394 836 aa15.55■□□□□ 0.08
CLCN6-201ENST00000312413 MMRN2Q9H8L6 949 aa15.55■□□□□ 0.08
CLCN6-201ENST00000312413 PI4KAP2A4QPH2 592 aa15.54■□□□□ 0.08
CLCN6-201ENST00000312413 USHBP1Q8N6Y0 703 aa15.54■□□□□ 0.08
CLCN6-201ENST00000312413 PI4KAP1Q8N8J0 262 aa15.54■□□□□ 0.08
CLCN6-201ENST00000312413 DNAJC21Q5F1R6 531 aaKnown RBP15.54■□□□□ 0.08
CLCN6-201ENST00000312413 ERO1AQ96HE7 468 aa15.54■□□□□ 0.08
CLCN6-201ENST00000312413 ERMNQ8TAM6 284 aa15.54■□□□□ 0.08
CLCN6-201ENST00000312413 IFNKQ9P0W0 207 aa15.54■□□□□ 0.08
CLCN6-201ENST00000312413 ZFYP08048 801 aaPredicted RBP15.54■□□□□ 0.08
CLCN6-201ENST00000312413 DDX46Q7L014 1031 aaKnown RBP15.54■□□□□ 0.08
CLCN6-201ENST00000312413 KRT23Q9C075 422 aa15.54■□□□□ 0.08
CLCN6-201ENST00000312413 SAMD15Q9P1V8 674 aa15.54■□□□□ 0.08
CLCN6-201ENST00000312413 STIM2Q9P246 746 aa15.54■□□□□ 0.08
CLCN6-201ENST00000312413 CCDC141Q6ZP82 1450 aa15.54■□□□□ 0.08
CLCN6-201ENST00000312413 A0A1B0GUL7 405 aa15.54■□□□□ 0.08
CLCN6-201ENST00000312413 GTF3C6Q969F1 213 aa15.54■□□□□ 0.08
CLCN6-201ENST00000312413 LDHCP07864 332 aa15.53■□□□□ 0.08
CLCN6-201ENST00000312413 Q6ZUG5 572 aa15.53■□□□□ 0.08
CLCN6-201ENST00000312413 ANKRD44Q8N8A2 993 aa15.53■□□□□ 0.08
CLCN6-201ENST00000312413 NSD2O96028 1365 aa15.53■□□□□ 0.08
CLCN6-201ENST00000312413 CFAP58Q5T655 872 aa15.53■□□□□ 0.08
CLCN6-201ENST00000312413 UBE3BQ7Z3V4 1068 aa15.53■□□□□ 0.08
CLCN6-201ENST00000312413 USP37Q86T82 979 aa15.53■□□□□ 0.08
CLCN6-201ENST00000312413 ASIC1P78348 528 aa15.53■□□□□ 0.08
CLCN6-201ENST00000312413 RTN1Q16799 776 aa15.53■□□□□ 0.08
CLCN6-201ENST00000312413 DDX23Q9BUQ8 820 aaKnown RBP15.53■□□□□ 0.08
CLCN6-201ENST00000312413 MEIS3Q99687 375 aa15.52■□□□□ 0.08
CLCN6-201ENST00000312413 EVCP57679 992 aa15.52■□□□□ 0.08
CLCN6-201ENST00000312413 PPP2R3AQ06190 1150 aa15.52■□□□□ 0.08
CLCN6-201ENST00000312413 WAPLQ7Z5K2 1190 aa15.52■□□□□ 0.08
CLCN6-201ENST00000312413 IFT81Q8WYA0 676 aa15.52■□□□□ 0.08
CLCN6-201ENST00000312413 DHX58Q96C10 678 aa15.52■□□□□ 0.08
CLCN6-201ENST00000312413 INTS4Q96HW7 963 aaKnown RBP15.52■□□□□ 0.08
CLCN6-201ENST00000312413 PUS7Q96PZ0 661 aaKnown RBP15.52■□□□□ 0.08
CLCN6-201ENST00000312413 CWC25Q9NXE8 425 aaPredicted RBP15.52■□□□□ 0.08
CLCN6-201ENST00000312413 U2AF2P26368 475 aaKnown RBP eCLIP15.52■□□□□ 0.072e-7■■■□□ 14.7
CLCN6-201ENST00000312413 SETDB1Q15047 1291 aa15.52■□□□□ 0.07
CLCN6-201ENST00000312413 TRMT1LQ7Z2T5 733 aaKnown RBP15.52■□□□□ 0.07
CLCN6-201ENST00000312413 ZBTB3Q9H5J0 574 aa15.52■□□□□ 0.07
CLCN6-201ENST00000312413 CNNM2Q9H8M5 875 aa15.52■□□□□ 0.07
CLCN6-201ENST00000312413 BAG3O95817 575 aa15.51■□□□□ 0.07
CLCN6-201ENST00000312413 A0A1B0GUA9 196 aa15.51■□□□□ 0.07
CLCN6-201ENST00000312413 TLDC2A0PJX2 215 aa15.51■□□□□ 0.07
CLCN6-201ENST00000312413 TRIM75PA6NK02 468 aa15.51■□□□□ 0.07
CLCN6-201ENST00000312413 ZPR1O75312 459 aa15.51■□□□□ 0.07
CLCN6-201ENST00000312413 UQCRFS1P1P0C7P4 283 aa15.51■□□□□ 0.07
CLCN6-201ENST00000312413 TNNC1P63316 161 aa15.51■□□□□ 0.07
CLCN6-201ENST00000312413 KRBA2Q6ZNG9 492 aa15.51■□□□□ 0.07
CLCN6-201ENST00000312413 SAMM50Q9Y512 469 aa15.51■□□□□ 0.07
CLCN6-201ENST00000312413 LACTBP83111 547 aaPredicted RBP15.51■□□□□ 0.07
CLCN6-201ENST00000312413 MCMDC2Q4G0Z9 681 aa15.51■□□□□ 0.07
CLCN6-201ENST00000312413 MTRF1LQ9UGC7 380 aaKnown RBP15.51■□□□□ 0.07
CLCN6-201ENST00000312413 UTP14AQ9BVJ6 771 aaKnown RBP15.51■□□□□ 0.07
CLCN6-201ENST00000312413 UBXN1Q04323 297 aa15.5■□□□□ 0.07
CLCN6-201ENST00000312413 NAA25Q14CX7 972 aa15.5■□□□□ 0.07
CLCN6-201ENST00000312413 PPFIBP2Q8ND30 876 aa15.5■□□□□ 0.07
CLCN6-201ENST00000312413 NAP1L3Q99457 506 aaPredicted RBP15.5■□□□□ 0.07
CLCN6-201ENST00000312413 CHMP4BP1P59074 171 aa15.5■□□□□ 0.07
CLCN6-201ENST00000312413 CNGA4Q8IV77 575 aa15.5■□□□□ 0.07
CLCN6-201ENST00000312413 ESR2Q92731 530 aa15.5■□□□□ 0.07
CLCN6-201ENST00000312413 TTC21BQ7Z4L5 1316 aa15.5■□□□□ 0.07
CLCN6-201ENST00000312413 B4GALNT4Q76KP1 1039 aa15.5■□□□□ 0.07
CLCN6-201ENST00000312413 ANKLE2Q86XL3 938 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms