RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 API5Q9BZZ5 524 aaKnown RBP15.2■□□□□ 0.02
SCFD1-201ENST00000311943 ANKIB1Q9P2G1 1089 aa15.2■□□□□ 0.02
SCFD1-201ENST00000311943 GLTPD2A6NH11 291 aa15.19■□□□□ 0.02
SCFD1-201ENST00000311943 RTFDC1Q9BY42 306 aaPredicted RBP15.19■□□□□ 0.02
SCFD1-201ENST00000311943 C1orf115Q9H7X2 142 aa15.19■□□□□ 0.02
SCFD1-201ENST00000311943 LRRFIP2Q9Y608 721 aaKnown RBP15.19■□□□□ 0.02
SCFD1-201ENST00000311943 KIF16BQ96L93 1317 aa15.19■□□□□ 0.02
SCFD1-201ENST00000311943 CEP350Q5VT06 3117 aa15.19■□□□□ 0.02
SCFD1-201ENST00000311943 SHTN1A0MZ66 631 aa15.19■□□□□ 0.02
SCFD1-201ENST00000311943 UFL1O94874 794 aa15.19■□□□□ 0.02
SCFD1-201ENST00000311943 LRRC24Q50LG9 513 aa15.19■□□□□ 0.02
SCFD1-201ENST00000311943 RAD17O75943 681 aa15.18■□□□□ 0.02
SCFD1-201ENST00000311943 ZKSCAN2Q63HK3 967 aa15.18■□□□□ 0.02
SCFD1-201ENST00000311943 INTS3Q68E01 1043 aaKnown RBP15.18■□□□□ 0.02
SCFD1-201ENST00000311943 CC2D2BQ6DHV5 1058 aa15.18■□□□□ 0.02
SCFD1-201ENST00000311943 GJA3Q9Y6H8 435 aa15.18■□□□□ 0.02
SCFD1-201ENST00000311943 ANKRD18BA2A2Z9 1011 aa15.17■□□□□ 0.02
SCFD1-201ENST00000311943 FZD9O00144 591 aa15.17■□□□□ 0.02
SCFD1-201ENST00000311943 CHRNDQ07001 517 aa15.17■□□□□ 0.02
SCFD1-201ENST00000311943 IFIT5Q13325 482 aaKnown RBP15.17■□□□□ 0.02
SCFD1-201ENST00000311943 CDC5LQ99459 802 aaKnown RBP15.17■□□□□ 0.02
SCFD1-201ENST00000311943 BSDC1Q9NW68 430 aaPredicted RBP15.17■□□□□ 0.02
SCFD1-201ENST00000311943 RCAN3Q9UKA8 241 aa15.17■□□□□ 0.02
SCFD1-201ENST00000311943 CCT4P50991 539 aaKnown RBP15.17■□□□□ 0.02
SCFD1-201ENST00000311943 KIAA2012Q0VF49 1180 aa15.17■□□□□ 0.02
SCFD1-201ENST00000311943 WASHC4Q2M389 1173 aa15.17■□□□□ 0.02
SCFD1-201ENST00000311943 RABL6Q3YEC7 729 aaPredicted RBP15.17■□□□□ 0.02
SCFD1-201ENST00000311943 ARHGAP45Q92619 1136 aa15.17■□□□□ 0.02
SCFD1-201ENST00000311943 PA2G4Q9UQ80 394 aaKnown RBP15.17■□□□□ 0.02
SCFD1-201ENST00000311943 ZBTB12Q9Y330 459 aaPredicted RBP15.17■□□□□ 0.02
SCFD1-201ENST00000311943 RTL9Q8NET4 1388 aa15.16■□□□□ 0.02
SCFD1-201ENST00000311943 CXCL9Q07325 125 aa15.16■□□□□ 0.02
SCFD1-201ENST00000311943 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.16■□□□□ 0.02
SCFD1-201ENST00000311943 UBTFL1P0CB47 393 aaPredicted RBP15.16■□□□□ 0.02
SCFD1-201ENST00000311943 IGHMBP2P38935 993 aaKnown RBP15.16■□□□□ 0.02
SCFD1-201ENST00000311943 CCDC57Q2TAC2 916 aa15.16■□□□□ 0.02
SCFD1-201ENST00000311943 MPHOSPH8Q99549 860 aa15.16■□□□□ 0.02
SCFD1-201ENST00000311943 MXD3Q9BW11 206 aa15.16■□□□□ 0.02
SCFD1-201ENST00000311943 TMX4Q9H1E5 349 aaPredicted RBP15.16■□□□□ 0.02
SCFD1-201ENST00000311943 SCN9AQ15858 1988 aa15.15■□□□□ 0.02
SCFD1-201ENST00000311943 HSP90B1P14625 803 aaKnown RBP15.15■□□□□ 0.02
SCFD1-201ENST00000311943 RFX5P48382 616 aaPredicted RBP15.15■□□□□ 0.02
SCFD1-201ENST00000311943 LDHAL6AQ6ZMR3 332 aa15.15■□□□□ 0.02
SCFD1-201ENST00000311943 JDP2Q8WYK2 163 aa15.15■□□□□ 0.02
SCFD1-201ENST00000311943 SIL1Q9H173 461 aa15.15■□□□□ 0.02
SCFD1-201ENST00000311943 NIM1KQ8IY84 436 aa15.14■□□□□ 0.01
SCFD1-201ENST00000311943 PODXL2Q9NZ53 605 aa15.14■□□□□ 0.01
SCFD1-201ENST00000311943 GGA1Q9UJY5 639 aa15.14■□□□□ 0.01
SCFD1-201ENST00000311943 IPO8O15397 1037 aaKnown RBP15.14■□□□□ 0.01
SCFD1-201ENST00000311943 ITPRIPQ8IWB1 547 aa15.14■□□□□ 0.01
SCFD1-201ENST00000311943 XDHP47989 1333 aa15.13■□□□□ 0.01
SCFD1-201ENST00000311943 PNMA6EA0A0J9YXQ4 647 aa15.13■□□□□ 0.01
SCFD1-201ENST00000311943 EPS15P42566 896 aa15.13■□□□□ 0.01
SCFD1-201ENST00000311943 TAF7LQ5H9L4 462 aa15.13■□□□□ 0.01
SCFD1-201ENST00000311943 DZIP1LQ8IYY4 767 aaKnown RBP15.13■□□□□ 0.01
SCFD1-201ENST00000311943 CNNM1Q9NRU3 951 aa15.13■□□□□ 0.01
SCFD1-201ENST00000311943 JAG2Q9Y219 1238 aa15.13■□□□□ 0.01
SCFD1-201ENST00000311943 COG6Q9Y2V7 657 aa15.13■□□□□ 0.01
SCFD1-201ENST00000311943 A0A1B0GUL6 1792 aa15.12■□□□□ 0.01
SCFD1-201ENST00000311943 ECE2O60344 883 aa15.12■□□□□ 0.01
SCFD1-201ENST00000311943 SCNN1DP51172 638 aa15.12■□□□□ 0.01
SCFD1-201ENST00000311943 PTPN12Q05209 780 aaKnown RBP15.12■□□□□ 0.01
SCFD1-201ENST00000311943 DPY19L2Q6NUT2 758 aa15.12■□□□□ 0.01
SCFD1-201ENST00000311943 TMC4Q7Z404 712 aa15.12■□□□□ 0.01
SCFD1-201ENST00000311943 ZNRF3Q9ULT6 936 aa15.12■□□□□ 0.01
SCFD1-201ENST00000311943 KDM2BQ8NHM5 1336 aa15.12■□□□□ 0.01
SCFD1-201ENST00000311943 EGFRP00533 1210 aa15.12■□□□□ 0.01
SCFD1-201ENST00000311943 ZC3H12CQ9C0D7 883 aaKnown RBP15.12■□□□□ 0.01
SCFD1-201ENST00000311943 RIPOR2Q9Y4F9 1068 aa15.12■□□□□ 0.01
SCFD1-201ENST00000311943 PSMD14O00487 310 aa15.11■□□□□ 0.01
SCFD1-201ENST00000311943 ZBTB7BO15156 539 aaPredicted RBP15.11■□□□□ 0.01
SCFD1-201ENST00000311943 HTRA3P83110 453 aa15.11■□□□□ 0.01
SCFD1-201ENST00000311943 FTSJ3Q8IY81 847 aaKnown RBP15.11■□□□□ 0.01
SCFD1-201ENST00000311943 ZNF804BA4D1E1 1349 aa15.11■□□□□ 0.01
SCFD1-201ENST00000311943 IRS2Q9Y4H2 1338 aa15.11■□□□□ 0.01
SCFD1-201ENST00000311943 SUPT20HQ8NEM7 779 aa15.1■□□□□ 0.01
SCFD1-201ENST00000311943 PCNTO95613 3336 aa15.1■□□□□ 0.01
SCFD1-201ENST00000311943 GMPSP49915 693 aaPredicted RBP15.1■□□□□ 0.01
SCFD1-201ENST00000311943 EIF6P56537 245 aaKnown RBP15.1■□□□□ 0.01
SCFD1-201ENST00000311943 C1QTNF8P60827 252 aa15.1■□□□□ 0.01
SCFD1-201ENST00000311943 FMR1Q06787 632 aaKnown RBP eCLIP15.1■□□□□ 0.01
SCFD1-201ENST00000311943 DLK2Q6UY11 383 aa15.1■□□□□ 0.01
SCFD1-201ENST00000311943 ATG9AQ7Z3C6 839 aa15.1■□□□□ 0.01
SCFD1-201ENST00000311943 VEGFAP15692 232 aaPredicted RBP15.09■□□□□ 0.01
SCFD1-201ENST00000311943 ATP2B4P23634 1241 aa15.09■□□□□ 0.01
SCFD1-201ENST00000311943 IQSEC3Q9UPP2 1182 aaPredicted RBP15.09■□□□□ 0.01
SCFD1-201ENST00000311943 WDR90Q96KV7 1748 aa15.09■□□□□ 0.01
SCFD1-201ENST00000311943 ZC3H4Q9UPT8 1303 aaKnown RBP15.09■□□□□ 0.01
SCFD1-201ENST00000311943 GYG1P46976 350 aa15.09■□□□□ 0.01
SCFD1-201ENST00000311943 EAPPQ56P03 285 aaPredicted RBP15.09■□□□□ 0.01
SCFD1-201ENST00000311943 GPC2Q8N158 579 aa15.09■□□□□ 0.01
SCFD1-201ENST00000311943 SRGAP3O43295 1099 aa15.08■□□□□ 0
SCFD1-201ENST00000311943 GRIPAP1Q4V328 841 aa15.08■□□□□ 0
SCFD1-201ENST00000311943 CIAPIN1Q6FI81 312 aa15.08■□□□□ 0
SCFD1-201ENST00000311943 VGLL2Q8N8G2 317 aa15.08■□□□□ 0
SCFD1-201ENST00000311943 TAF1DQ9H5J8 278 aaPredicted RBP15.08■□□□□ 0
SCFD1-201ENST00000311943 SCAF8Q9UPN6 1271 aaKnown RBP15.08■□□□□ 0
SCFD1-201ENST00000311943 FBXW7Q969H0 707 aa15.07■□□□□ 0
SCFD1-201ENST00000311943 KCNJ4P48050 445 aa15.07■□□□□ 0
SCFD1-201ENST00000311943 HIRAP54198 1017 aaPredicted RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms