RNA–Protein interactions for RNA: ENST00000310571.7

PAAF1-201, Transcript of proteasomal ATPase associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PAAF1, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-201ENST00000310571 IQCA1Q86XH1 822 aa16.01■□□□□ 0.15
PAAF1-201ENST00000310571 CCNL1Q9UK58 526 aaPredicted RBP16.01■□□□□ 0.15
PAAF1-201ENST00000310571 GOLGA8AA7E2F4 631 aa16■□□□□ 0.15
PAAF1-201ENST00000310571 RAB3GAP1Q15042 981 aa16■□□□□ 0.15
PAAF1-201ENST00000310571 TMEM67Q5HYA8 995 aa16■□□□□ 0.15
PAAF1-201ENST00000310571 MFSD6Q6ZSS7 791 aa16■□□□□ 0.15
PAAF1-201ENST00000310571 NCAPD2Q15021 1401 aa16■□□□□ 0.15
PAAF1-201ENST00000310571 ZSCAN22P10073 491 aaPredicted RBP16■□□□□ 0.15
PAAF1-201ENST00000310571 ST5P78524 1137 aa16■□□□□ 0.15
PAAF1-201ENST00000310571 MICU3Q86XE3 530 aa16■□□□□ 0.15
PAAF1-201ENST00000310571 CCDC144CPQ8IYA2 1237 aa16■□□□□ 0.15
PAAF1-201ENST00000310571 RUFY3Q7L099 469 aa16■□□□□ 0.15
PAAF1-201ENST00000310571 ZSCAN29Q8IWY8 852 aaPredicted RBP16■□□□□ 0.15
PAAF1-201ENST00000310571 CCDC39Q9UFE4 941 aa16■□□□□ 0.15
PAAF1-201ENST00000310571 USP21Q9UK80 565 aa16■□□□□ 0.15
PAAF1-201ENST00000310571 CCDC196A0A1B0GTZ2 297 aa15.99■□□□□ 0.15
PAAF1-201ENST00000310571 CAMK4Q16566 473 aa15.99■□□□□ 0.15
PAAF1-201ENST00000310571 EDC3Q96F86 508 aaKnown RBP15.99■□□□□ 0.15
PAAF1-201ENST00000310571 SNX14Q9Y5W7 946 aa15.99■□□□□ 0.15
PAAF1-201ENST00000310571 KLF18A0A0U1RQI7 1052 aa15.99■□□□□ 0.15
PAAF1-201ENST00000310571 BCL11BQ9C0K0 894 aaPredicted RBP15.99■□□□□ 0.15
PAAF1-201ENST00000310571 REREQ9P2R6 1566 aa15.99■□□□□ 0.15
PAAF1-201ENST00000310571 SLC4A4Q9Y6R1 1079 aa15.99■□□□□ 0.15
PAAF1-201ENST00000310571 CRB1P82279 1406 aa15.98■□□□□ 0.15
PAAF1-201ENST00000310571 ORC3Q9UBD5 711 aaPredicted RBP15.98■□□□□ 0.15
PAAF1-201ENST00000310571 KLHL40Q2TBA0 621 aa15.98■□□□□ 0.15
PAAF1-201ENST00000310571 ZNF219Q9P2Y4 722 aaPredicted RBP15.98■□□□□ 0.15
PAAF1-201ENST00000310571 CHST3Q7LGC8 479 aa15.98■□□□□ 0.15
PAAF1-201ENST00000310571 HELLSQ9NRZ9 838 aa15.98■□□□□ 0.15
PAAF1-201ENST00000310571 HEG1Q9ULI3 1381 aa15.98■□□□□ 0.15
PAAF1-201ENST00000310571 KBTBD3Q8NAB2 608 aa15.98■□□□□ 0.15
PAAF1-201ENST00000310571 OSBPL3Q9H4L5 887 aa15.98■□□□□ 0.15
PAAF1-201ENST00000310571 STAP2Q9UGK3 403 aa15.98■□□□□ 0.15
PAAF1-201ENST00000310571 ATP5JP18859 108 aa15.97■□□□□ 0.15
PAAF1-201ENST00000310571 MAP3K11Q16584 847 aa15.97■□□□□ 0.15
PAAF1-201ENST00000310571 ANKRD20A12PQ8NF67 263 aa15.97■□□□□ 0.15
PAAF1-201ENST00000310571 CCDC183Q5T5S1 534 aa15.97■□□□□ 0.15
PAAF1-201ENST00000310571 MAGEB6Q8N7X4 407 aa15.97■□□□□ 0.15
PAAF1-201ENST00000310571 INTS4Q96HW7 963 aaKnown RBP15.97■□□□□ 0.15
PAAF1-201ENST00000310571 NOL7Q9UMY1 257 aaKnown RBP15.97■□□□□ 0.15
PAAF1-201ENST00000310571 TPM1P09493 284 aa15.97■□□□□ 0.15
PAAF1-201ENST00000310571 METAP2P50579 478 aaKnown RBP eCLIP15.97■□□□□ 0.15
PAAF1-201ENST00000310571 ZNF287Q9HBT7 754 aa15.97■□□□□ 0.15
PAAF1-201ENST00000310571 SLC27A2O14975 620 aa15.97■□□□□ 0.15
PAAF1-201ENST00000310571 TRAPPC3LQ5T215 181 aa15.97■□□□□ 0.15
PAAF1-201ENST00000310571 SPTY2D1Q68D10 685 aaPredicted RBP15.97■□□□□ 0.15
PAAF1-201ENST00000310571 FAM43AQ8N2R8 423 aa15.97■□□□□ 0.15
PAAF1-201ENST00000310571 CTCFLQ8NI51 663 aaPredicted RBP15.97■□□□□ 0.15
PAAF1-201ENST00000310571 RBM27Q9P2N5 1060 aaKnown RBP15.97■□□□□ 0.15
PAAF1-201ENST00000310571 PUM3Q15397 648 aaKnown RBP15.96■□□□□ 0.15
PAAF1-201ENST00000310571 COPRSQ9NQ92 184 aa15.96■□□□□ 0.15
PAAF1-201ENST00000310571 USP32Q8NFA0 1604 aa15.96■□□□□ 0.15
PAAF1-201ENST00000310571 NAA16Q6N069 864 aaPredicted RBP15.96■□□□□ 0.15
PAAF1-201ENST00000310571 MPNDQ8N594 471 aa15.96■□□□□ 0.15
PAAF1-201ENST00000310571 LDHCP07864 332 aa15.96■□□□□ 0.15
PAAF1-201ENST00000310571 SLC4A8Q2Y0W8 1093 aa15.96■□□□□ 0.15
PAAF1-201ENST00000310571 UNC5CLQ8IV45 518 aa15.96■□□□□ 0.15
PAAF1-201ENST00000310571 ZNF444Q8N0Y2 327 aaPredicted RBP15.96■□□□□ 0.15
PAAF1-201ENST00000310571 TPM2P07951 284 aa15.96■□□□□ 0.14
PAAF1-201ENST00000310571 HSPA4P34932 840 aa15.96■□□□□ 0.14
PAAF1-201ENST00000310571 IARSP41252 1262 aaKnown RBP15.96■□□□□ 0.14
PAAF1-201ENST00000310571 SSRP1Q08945 709 aaKnown RBP15.96■□□□□ 0.14
PAAF1-201ENST00000310571 ZBTB38Q8NAP3 1195 aaPredicted RBP15.96■□□□□ 0.14
PAAF1-201ENST00000310571 PIGBQ92521 554 aa15.96■□□□□ 0.14
PAAF1-201ENST00000310571 FAM13BQ9NYF5 915 aa15.96■□□□□ 0.14
PAAF1-201ENST00000310571 ZBTB1Q9Y2K1 713 aa15.96■□□□□ 0.14
PAAF1-201ENST00000310571 TAF5LO75529 589 aa15.95■□□□□ 0.14
PAAF1-201ENST00000310571 TXLNAP40222 546 aa15.95■□□□□ 0.14
PAAF1-201ENST00000310571 SOGA3Q5TF21 947 aa15.95■□□□□ 0.14
PAAF1-201ENST00000310571 MAP3K15Q6ZN16 1313 aa15.95■□□□□ 0.14
PAAF1-201ENST00000310571 PRC1O43663 620 aa15.95■□□□□ 0.14
PAAF1-201ENST00000310571 DHX32Q7L7V1 743 aaKnown RBP15.95■□□□□ 0.14
PAAF1-201ENST00000310571 MIGA1Q8NAN2 632 aa15.95■□□□□ 0.14
PAAF1-201ENST00000310571 ITSN1Q15811 1721 aa15.95■□□□□ 0.14
PAAF1-201ENST00000310571 SIGLEC1Q9BZZ2 1709 aa15.95■□□□□ 0.14
PAAF1-201ENST00000310571 PCCAP05165 728 aaPredicted RBP15.95■□□□□ 0.14
PAAF1-201ENST00000310571 TSR1Q2NL82 804 aaKnown RBP15.95■□□□□ 0.14
PAAF1-201ENST00000310571 LRRC24Q50LG9 513 aa15.95■□□□□ 0.14
PAAF1-201ENST00000310571 NRKQ7Z2Y5 1582 aa15.95■□□□□ 0.14
PAAF1-201ENST00000310571 FER1L4A9Z1Z3 1794 aa15.95■□□□□ 0.14
PAAF1-201ENST00000310571 BAG3O95817 575 aa15.95■□□□□ 0.14
PAAF1-201ENST00000310571 CRNKL1Q9BZJ0 848 aaKnown RBP15.95■□□□□ 0.14
PAAF1-201ENST00000310571 LOC102724428A0A0B4J2F2 783 aa15.94■□□□□ 0.14
PAAF1-201ENST00000310571 SIK1P57059 783 aa15.94■□□□□ 0.14
PAAF1-201ENST00000310571 CATIPQ7Z7H3 387 aa15.94■□□□□ 0.14
PAAF1-201ENST00000310571 SPC24Q8NBT2 197 aa15.94■□□□□ 0.14
PAAF1-201ENST00000310571 CNPY2Q9Y2B0 182 aa15.94■□□□□ 0.14
PAAF1-201ENST00000310571 CTSWP56202 376 aa15.94■□□□□ 0.14
PAAF1-201ENST00000310571 APOBRQ0VD83 1088 aa15.94■□□□□ 0.14
PAAF1-201ENST00000310571 SLF2Q8IX21 1173 aa15.94■□□□□ 0.14
PAAF1-201ENST00000310571 ZNF622Q969S3 477 aaKnown RBP eCLIP15.94■□□□□ 0.142e-7■■■□□ 16.3
PAAF1-201ENST00000310571 MYO5BQ9ULV0 1848 aa15.94■□□□□ 0.14
PAAF1-201ENST00000310571 F13A1P00488 732 aa15.93■□□□□ 0.14
PAAF1-201ENST00000310571 KRT23Q9C075 422 aa15.93■□□□□ 0.14
PAAF1-201ENST00000310571 SMC2O95347 1197 aa15.93■□□□□ 0.14
PAAF1-201ENST00000310571 POLA2Q14181 598 aa15.93■□□□□ 0.14
PAAF1-201ENST00000310571 GIGYF2Q6Y7W6 1299 aaKnown RBP15.93■□□□□ 0.14
PAAF1-201ENST00000310571 ZNF592Q92610 1267 aa15.93■□□□□ 0.14
PAAF1-201ENST00000310571 PALD1Q9ULE6 856 aa15.93■□□□□ 0.14
PAAF1-201ENST00000310571 TSPY2A6NKD2 308 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms