RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 CNNM1Q9NRU3 951 aa16.05■□□□□ 0.16
APTX-201ENST00000309615 PCDHB15Q9Y5E8 787 aa16.05■□□□□ 0.16
APTX-201ENST00000309615 GPSM2P81274 684 aa16.04■□□□□ 0.16
APTX-201ENST00000309615 CC2D2BQ6DHV5 1058 aa16.04■□□□□ 0.16
APTX-201ENST00000309615 ARHGAP27Q6ZUM4 889 aa16.04■□□□□ 0.16
APTX-201ENST00000309615 COPRSQ9NQ92 184 aa16.04■□□□□ 0.16
APTX-201ENST00000309615 NSFL1CQ9UNZ2 370 aaKnown RBP16.04■□□□□ 0.16
APTX-201ENST00000309615 LRRC37AA6NMS7 1700 aa16.04■□□□□ 0.16
APTX-201ENST00000309615 RTKN2Q8IZC4 609 aa16.03■□□□□ 0.16
APTX-201ENST00000309615 RIPOR2Q9Y4F9 1068 aa16.03■□□□□ 0.16
APTX-201ENST00000309615 EYA2O00167 538 aa16.03■□□□□ 0.16
APTX-201ENST00000309615 NFKBIEO00221 500 aa16.03■□□□□ 0.16
APTX-201ENST00000309615 GRIN3BO60391 1043 aa16.03■□□□□ 0.16
APTX-201ENST00000309615 CHRNDQ07001 517 aa16.03■□□□□ 0.16
APTX-201ENST00000309615 ANKIB1Q9P2G1 1089 aa16.03■□□□□ 0.16
APTX-201ENST00000309615 WTIPA6NIX2 430 aaPredicted RBP16.02■□□□□ 0.16
APTX-201ENST00000309615 DPP8Q6V1X1 898 aaPredicted RBP16.02■□□□□ 0.16
APTX-201ENST00000309615 ATG9AQ7Z3C6 839 aa16.02■□□□□ 0.16
APTX-201ENST00000309615 MPNDQ8N594 471 aa16.02■□□□□ 0.16
APTX-201ENST00000309615 HELBQ8NG08 1087 aaPredicted RBP16.02■□□□□ 0.16
APTX-201ENST00000309615 TAF5LO75529 589 aa16.01■□□□□ 0.15
APTX-201ENST00000309615 RASSF7Q02833 373 aa16.01■□□□□ 0.15
APTX-201ENST00000309615 AAMPQ13685 434 aa16.01■□□□□ 0.15
APTX-201ENST00000309615 DCAF8L1A6NGE4 600 aa16.01■□□□□ 0.15
APTX-201ENST00000309615 HMMRO75330 724 aa16.01■□□□□ 0.15
APTX-201ENST00000309615 CIAO1O76071 339 aa16.01■□□□□ 0.15
APTX-201ENST00000309615 GRIPAP1Q4V328 841 aa16.01■□□□□ 0.15
APTX-201ENST00000309615 TAOK3Q9H2K8 898 aa16.01■□□□□ 0.15
APTX-201ENST00000309615 PODXL2Q9NZ53 605 aa16.01■□□□□ 0.15
APTX-201ENST00000309615 POLLQ9UGP5 575 aa16.01■□□□□ 0.15
APTX-201ENST00000309615 XDHP47989 1333 aa16.01■□□□□ 0.15
APTX-201ENST00000309615 DUOX1Q9NRD9 1551 aa16■□□□□ 0.15
APTX-201ENST00000309615 SURF6O75683 361 aaKnown RBP16■□□□□ 0.15
APTX-201ENST00000309615 FKBP4Q02790 459 aaKnown RBP eCLIP16■□□□□ 0.15
APTX-201ENST00000309615 METTL24Q5JXM2 366 aa16■□□□□ 0.15
APTX-201ENST00000309615 PSMD1Q99460 953 aa16■□□□□ 0.15
APTX-201ENST00000309615 ANKRD2Q9GZV1 360 aa16■□□□□ 0.15
APTX-201ENST00000309615 FBXO3Q9UK99 471 aa16■□□□□ 0.15
APTX-201ENST00000309615 FER1L6Q2WGJ9 1857 aa16■□□□□ 0.15
APTX-201ENST00000309615 MROH5Q6ZUA9 1318 aa16■□□□□ 0.15
APTX-201ENST00000309615 SNAP23O00161 211 aa15.99■□□□□ 0.15
APTX-201ENST00000309615 IL15P40933 162 aaPredicted RBP15.99■□□□□ 0.15
APTX-201ENST00000309615 PRELPP51888 382 aa15.99■□□□□ 0.15
APTX-201ENST00000309615 TBC1D16Q8TBP0 767 aa15.99■□□□□ 0.15
APTX-201ENST00000309615 RTFDC1Q9BY42 306 aaPredicted RBP15.99■□□□□ 0.15
APTX-201ENST00000309615 ZNF277Q9NRM2 450 aaPredicted RBP15.99■□□□□ 0.15
APTX-201ENST00000309615 GGA1Q9UJY5 639 aa15.99■□□□□ 0.15
APTX-201ENST00000309615 LTBP1Q14766 1721 aa15.99■□□□□ 0.15
APTX-201ENST00000309615 C6orf229H3BNL8 230 aa15.99■□□□□ 0.15
APTX-201ENST00000309615 UFL1O94874 794 aa15.99■□□□□ 0.15
APTX-201ENST00000309615 VGLL2Q8N8G2 317 aa15.99■□□□□ 0.15
APTX-201ENST00000309615 GPR101Q96P66 508 aaPredicted RBP15.99■□□□□ 0.15
APTX-201ENST00000309615 EXOC6BQ9Y2D4 811 aa15.99■□□□□ 0.15
APTX-201ENST00000309615 NOP58Q9Y2X3 529 aaKnown RBP15.99■□□□□ 0.15
APTX-201ENST00000309615 G3BP1Q13283 466 aaKnown RBP eCLIP15.98■□□□□ 0.15
APTX-201ENST00000309615 LTBP3Q9NS15 1303 aa15.98■□□□□ 0.15
APTX-201ENST00000309615 NEFLP07196 543 aa15.97■□□□□ 0.15
APTX-201ENST00000309615 ATP2B4P23634 1241 aa15.97■□□□□ 0.15
APTX-201ENST00000309615 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.97■□□□□ 0.15
APTX-201ENST00000309615 SASH1O94885 1247 aa15.97■□□□□ 0.15
APTX-201ENST00000309615 PDE8BO95263 885 aa15.97■□□□□ 0.15
APTX-201ENST00000309615 OS9Q13438 667 aaPredicted RBP15.97■□□□□ 0.15
APTX-201ENST00000309615 CEP126Q9P2H0 1117 aa15.97■□□□□ 0.15
APTX-201ENST00000309615 LEMD3Q9Y2U8 911 aa15.97■□□□□ 0.15
APTX-201ENST00000309615 ZNF804BA4D1E1 1349 aa15.97■□□□□ 0.15
APTX-201ENST00000309615 A0A1B0GUL6 1792 aa15.96■□□□□ 0.15
APTX-201ENST00000309615 KCNJ4P48050 445 aa15.96■□□□□ 0.15
APTX-201ENST00000309615 TFCP2Q12800 502 aa15.96■□□□□ 0.15
APTX-201ENST00000309615 SUPT20HQ8NEM7 779 aa15.96■□□□□ 0.15
APTX-201ENST00000309615 RIMBP2O15034 1052 aa15.95■□□□□ 0.14
APTX-201ENST00000309615 LMNB1P20700 586 aa15.95■□□□□ 0.14
APTX-201ENST00000309615 KLRK1P26718 216 aa15.95■□□□□ 0.14
APTX-201ENST00000309615 IARSP41252 1262 aaKnown RBP15.95■□□□□ 0.14
APTX-201ENST00000309615 AOC3Q16853 763 aa15.95■□□□□ 0.14
APTX-201ENST00000309615 WASHC4Q2M389 1173 aa15.95■□□□□ 0.14
APTX-201ENST00000309615 APBB1O00213 710 aa15.95■□□□□ 0.14
APTX-201ENST00000309615 PPIP5K2O43314 1243 aa15.95■□□□□ 0.14
APTX-201ENST00000309615 TXNRD3Q86VQ6 643 aa15.95■□□□□ 0.14
APTX-201ENST00000309615 KIAA2012Q0VF49 1180 aa15.94■□□□□ 0.14
APTX-201ENST00000309615 HDAC1Q13547 482 aaPredicted RBP15.94■□□□□ 0.14
APTX-201ENST00000309615 UBE4AQ14139 1066 aa15.94■□□□□ 0.14
APTX-201ENST00000309615 PUM3Q15397 648 aaKnown RBP15.94■□□□□ 0.14
APTX-201ENST00000309615 DCTPP1Q9H773 170 aa15.94■□□□□ 0.14
APTX-201ENST00000309615 FGFR2P21802 821 aa15.93■□□□□ 0.14
APTX-201ENST00000309615 HSP90AB4PQ58FF6 505 aa15.93■□□□□ 0.14
APTX-201ENST00000309615 C9orf131Q5VYM1 1079 aa15.93■□□□□ 0.14
APTX-201ENST00000309615 EYA3Q99504 573 aa15.93■□□□□ 0.14
APTX-201ENST00000309615 ZC3H12CQ9C0D7 883 aaKnown RBP15.93■□□□□ 0.14
APTX-201ENST00000309615 RNF181Q9P0P0 153 aa15.93■□□□□ 0.14
APTX-201ENST00000309615 COL4A5P29400 1685 aa15.93■□□□□ 0.14
APTX-201ENST00000309615 MED23Q9ULK4 1368 aa15.93■□□□□ 0.14
APTX-201ENST00000309615 IRS2Q9Y4H2 1338 aa15.93■□□□□ 0.14
APTX-201ENST00000309615 IGHDP01880 384 aa15.93■□□□□ 0.14
APTX-201ENST00000309615 LARGE2Q8N3Y3 721 aa15.93■□□□□ 0.14
APTX-201ENST00000309615 ATP2B3Q16720 1220 aa15.92■□□□□ 0.14
APTX-201ENST00000309615 ERC1Q8IUD2 1116 aa15.92■□□□□ 0.14
APTX-201ENST00000309615 RHPN1Q8TCX5 695 aa15.92■□□□□ 0.14
APTX-201ENST00000309615 LPIN2Q92539 896 aa15.92■□□□□ 0.14
APTX-201ENST00000309615 VPS33BQ9H267 617 aa15.92■□□□□ 0.14
APTX-201ENST00000309615 RWDD1Q9H446 243 aaPredicted RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms