RNA–Protein interactions for RNA: ENST00000308588.9

SNUPN-201, Transcript of snurportin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNUPN, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-201ENST00000308588 MTX1Q13505 466 aa27.65■■■□□ 2.02
SNUPN-201ENST00000308588 C9orf131Q5VYM1 1079 aa27.65■■■□□ 2.02
SNUPN-201ENST00000308588 LDHAL6AQ6ZMR3 332 aa27.64■■■□□ 2.02
SNUPN-201ENST00000308588 KLHDC4Q8TBB5 520 aa27.64■■■□□ 2.02
SNUPN-201ENST00000308588 C1orf115Q9H7X2 142 aa27.64■■■□□ 2.02
SNUPN-201ENST00000308588 PODXL2Q9NZ53 605 aa27.64■■■□□ 2.02
SNUPN-201ENST00000308588 RNF181Q9P0P0 153 aa27.63■■■□□ 2.01
SNUPN-201ENST00000308588 LTBP1Q14766 1721 aa27.63■■■□□ 2.01
SNUPN-201ENST00000308588 DUOX1Q9NRD9 1551 aa27.63■■■□□ 2.01
SNUPN-201ENST00000308588 PUS3Q9BZE2 481 aaKnown RBP27.62■■■□□ 2.01
SNUPN-201ENST00000308588 ZBTB40Q9NUA8 1239 aa27.62■■■□□ 2.01
SNUPN-201ENST00000308588 ANKIB1Q9P2G1 1089 aa27.62■■■□□ 2.01
SNUPN-201ENST00000308588 POLLQ9UGP5 575 aa27.62■■■□□ 2.01
SNUPN-201ENST00000308588 CCDC88AQ3V6T2 1871 aa27.62■■■□□ 2.01
SNUPN-201ENST00000308588 PTPN12Q05209 780 aaKnown RBP27.62■■■□□ 2.01
SNUPN-201ENST00000308588 XDHP47989 1333 aa27.61■■■□□ 2.01
SNUPN-201ENST00000308588 IARSP41252 1262 aaKnown RBP27.61■■■□□ 2.01
SNUPN-201ENST00000308588 CHRNDQ07001 517 aa27.61■■■□□ 2.01
SNUPN-201ENST00000308588 TBC1D16Q8TBP0 767 aa27.61■■■□□ 2.01
SNUPN-201ENST00000308588 CNNM1Q9NRU3 951 aa27.61■■■□□ 2.01
SNUPN-201ENST00000308588 SUPT16HQ9Y5B9 1047 aaKnown RBP27.61■■■□□ 2.01
SNUPN-201ENST00000308588 SRGAP3O43295 1099 aa27.6■■■□□ 2.01
SNUPN-201ENST00000308588 SUPT20HQ8NEM7 779 aa27.6■■■□□ 2.01
SNUPN-201ENST00000308588 RIPOR2Q9Y4F9 1068 aa27.6■■■□□ 2.01
SNUPN-201ENST00000308588 PNMA6EA0A0J9YXQ4 647 aa27.59■■■□□ 2.01
SNUPN-201ENST00000308588 WTIPA6NIX2 430 aaPredicted RBP27.58■■■□□ 2.01
SNUPN-201ENST00000308588 LRRC24Q50LG9 513 aa27.58■■■□□ 2.01
SNUPN-201ENST00000308588 ANKRD2Q9GZV1 360 aa27.58■■■□□ 2.01
SNUPN-201ENST00000308588 CHMP4BQ9H444 224 aaKnown RBP27.58■■■□□ 2.01
SNUPN-201ENST00000308588 GGA1Q9UJY5 639 aa27.58■■■□□ 2.01
SNUPN-201ENST00000308588 C6orf229H3BNL8 230 aa27.57■■■□□ 2
SNUPN-201ENST00000308588 UFL1O94874 794 aa27.57■■■□□ 2
SNUPN-201ENST00000308588 ATP8B2P98198 1209 aa27.57■■■□□ 2
SNUPN-201ENST00000308588 VPS33BQ9H267 617 aa27.57■■■□□ 2
SNUPN-201ENST00000308588 ATP2B4P23634 1241 aa27.57■■■□□ 2
SNUPN-201ENST00000308588 AOC3Q16853 763 aa27.57■■■□□ 2
SNUPN-201ENST00000308588 HELBQ8NG08 1087 aaPredicted RBP27.57■■■□□ 2
SNUPN-201ENST00000308588 GPR101Q96P66 508 aaPredicted RBP27.57■■■□□ 2
SNUPN-201ENST00000308588 COPRSQ9NQ92 184 aa27.57■■■□□ 2
SNUPN-201ENST00000308588 PA2G4Q9UQ80 394 aaKnown RBP27.57■■■□□ 2
SNUPN-201ENST00000308588 PPIP5K2O43314 1243 aa27.56■■■□□ 2
SNUPN-201ENST00000308588 KIAA2012Q0VF49 1180 aa27.56■■■□□ 2
SNUPN-201ENST00000308588 DICER1Q9UPY3 1922 aaKnown RBP27.56■■■□□ 2
SNUPN-201ENST00000308588 COL4A5P29400 1685 aa27.55■■■□□ 2
SNUPN-201ENST00000308588 EYA2O00167 538 aa27.55■■■□□ 2
SNUPN-201ENST00000308588 TAF5LO75529 589 aa27.55■■■□□ 2
SNUPN-201ENST00000308588 CEP85Q6P2H3 762 aa27.55■■■□□ 2
SNUPN-201ENST00000308588 LARGE2Q8N3Y3 721 aa27.55■■■□□ 2
SNUPN-201ENST00000308588 YY1P25490 414 aa27.54■■■□□ 2
SNUPN-201ENST00000308588 POLA2Q14181 598 aa27.54■■■□□ 2
SNUPN-201ENST00000308588 WASHC4Q2M389 1173 aa27.54■■■□□ 2
SNUPN-201ENST00000308588 SSH3Q8TE77 659 aa27.54■■■□□ 2
SNUPN-201ENST00000308588 LEMD3Q9Y2U8 911 aa27.54■■■□□ 2
SNUPN-201ENST00000308588 ATG9AQ7Z3C6 839 aa27.53■■■□□ 2
SNUPN-201ENST00000308588 EYA3Q99504 573 aa27.53■■■□□ 2
SNUPN-201ENST00000308588 SIL1Q9H173 461 aa27.53■■■□□ 2
SNUPN-201ENST00000308588 FBXO3Q9UK99 471 aa27.53■■■□□ 2
SNUPN-201ENST00000308588 MROH5Q6ZUA9 1318 aa27.53■■■□□ 2
SNUPN-201ENST00000308588 SNAP23O00161 211 aa27.52■■■□□ 2
SNUPN-201ENST00000308588 CRBNQ96SW2 442 aa27.52■■■□□ 2
SNUPN-201ENST00000308588 A0A1B0GUL6 1792 aa27.52■■■□□ 2
SNUPN-201ENST00000308588 RIMBP2O15034 1052 aa27.51■■■□□ 2
SNUPN-201ENST00000308588 CIAO1O76071 339 aa27.51■■■□□ 2
SNUPN-201ENST00000308588 JDP2Q8WYK2 163 aa27.51■■■□□ 2
SNUPN-201ENST00000308588 ZNF804BA4D1E1 1349 aa27.51■■■□□ 2
SNUPN-201ENST00000308588 ZC3H4Q9UPT8 1303 aaKnown RBP27.51■■■□□ 2
SNUPN-201ENST00000308588 VGLL2Q8N8G2 317 aa27.51■■□□□ 1.99
SNUPN-201ENST00000308588 ZC3H12CQ9C0D7 883 aaKnown RBP27.51■■□□□ 1.99
SNUPN-201ENST00000308588 TIAM2Q8IVF5 1701 aa27.5■■□□□ 1.99
SNUPN-201ENST00000308588 METTL24Q5JXM2 366 aa27.5■■□□□ 1.99
SNUPN-201ENST00000308588 FZD9O00144 591 aa27.49■■□□□ 1.99
SNUPN-201ENST00000308588 RPAP2Q8IXW5 612 aaPredicted RBP27.49■■□□□ 1.99
SNUPN-201ENST00000308588 KLRK1P26718 216 aa27.48■■□□□ 1.99
SNUPN-201ENST00000308588 KCNJ4P48050 445 aa27.48■■□□□ 1.99
SNUPN-201ENST00000308588 SIRT2Q8IXJ6 389 aa27.48■■□□□ 1.99
SNUPN-201ENST00000308588 NIM1KQ8IY84 436 aa27.48■■□□□ 1.99
SNUPN-201ENST00000308588 MED23Q9ULK4 1368 aa27.48■■□□□ 1.99
SNUPN-201ENST00000308588 IRS2Q9Y4H2 1338 aa27.47■■□□□ 1.99
SNUPN-201ENST00000308588 PDE8BO95263 885 aa27.47■■□□□ 1.99
SNUPN-201ENST00000308588 IL15P40933 162 aaPredicted RBP27.47■■□□□ 1.99
SNUPN-201ENST00000308588 TXNRD3Q86VQ6 643 aa27.47■■□□□ 1.99
SNUPN-201ENST00000308588 UBE4AQ14139 1066 aa27.46■■□□□ 1.99
SNUPN-201ENST00000308588 DOK7Q18PE1 504 aa27.46■■□□□ 1.99
SNUPN-201ENST00000308588 DBNDD1Q9H9R9 158 aa27.46■■□□□ 1.99
SNUPN-201ENST00000308588 ZNRF3Q9ULT6 936 aa27.46■■□□□ 1.99
SNUPN-201ENST00000308588 C15orf52Q6ZUT6 534 aaKnown RBP27.45■■□□□ 1.98
SNUPN-201ENST00000308588 YDJCA8MPS7 323 aa27.44■■□□□ 1.98
SNUPN-201ENST00000308588 CEP126Q9P2H0 1117 aa27.44■■□□□ 1.98
SNUPN-201ENST00000308588 NOP58Q9Y2X3 529 aaKnown RBP27.44■■□□□ 1.98
SNUPN-201ENST00000308588 ZNF541Q9H0D2 1346 aa27.43■■□□□ 1.98
SNUPN-201ENST00000308588 GLTPD2A6NH11 291 aa27.42■■□□□ 1.98
SNUPN-201ENST00000308588 ECE2O60344 883 aa27.42■■□□□ 1.98
SNUPN-201ENST00000308588 SURF6O75683 361 aaKnown RBP27.42■■□□□ 1.98
SNUPN-201ENST00000308588 FGFR2P21802 821 aa27.42■■□□□ 1.98
SNUPN-201ENST00000308588 G3BP1Q13283 466 aaKnown RBP eCLIP27.42■■□□□ 1.98
SNUPN-201ENST00000308588 DPY19L2Q6NUT2 758 aa27.41■■□□□ 1.98
SNUPN-201ENST00000308588 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.41■■□□□ 1.98
SNUPN-201ENST00000308588 EIF6P56537 245 aaKnown RBP27.41■■□□□ 1.98
SNUPN-201ENST00000308588 PUM3Q15397 648 aaKnown RBP27.41■■□□□ 1.98
SNUPN-201ENST00000308588 PCDHB15Q9Y5E8 787 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms