RNA–Protein interactions for RNA: ENST00000307305.12

PHTF2-203, Transcript of putative homeodomain transcription factor 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PHTF2, Length 4,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-203ENST00000307305 MRPS27Q92552 414 aaKnown RBP13.18□□□□□ -0.3
PHTF2-203ENST00000307305 SLC26A6Q9BXS9 759 aa13.18□□□□□ -0.3
PHTF2-203ENST00000307305 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.18□□□□□ -0.38e-7■■□□□ 12
PHTF2-203ENST00000307305 IFIT5Q13325 482 aaKnown RBP13.17□□□□□ -0.3
PHTF2-203ENST00000307305 TNNI3KQ59H18 835 aa13.17□□□□□ -0.3
PHTF2-203ENST00000307305 ZNF790Q6PG37 636 aa13.17□□□□□ -0.3
PHTF2-203ENST00000307305 MPHOSPH8Q99549 860 aa13.17□□□□□ -0.3
PHTF2-203ENST00000307305 ZKSCAN3Q9BRR0 538 aa13.17□□□□□ -0.3
PHTF2-203ENST00000307305 ZSWIM6Q9HCJ5 1215 aa13.17□□□□□ -0.3
PHTF2-203ENST00000307305 FPGT-TNNI3KV9GXZ4 949 aa13.17□□□□□ -0.3
PHTF2-203ENST00000307305 IFIT3O14879 490 aaKnown RBP13.17□□□□□ -0.3
PHTF2-203ENST00000307305 DHX32Q7L7V1 743 aaKnown RBP13.17□□□□□ -0.3
PHTF2-203ENST00000307305 IFNL2Q8IZJ0 200 aa13.17□□□□□ -0.3
PHTF2-203ENST00000307305 FAM89AQ96GI7 184 aa13.17□□□□□ -0.3
PHTF2-203ENST00000307305 USP28Q96RU2 1077 aa13.17□□□□□ -0.3
PHTF2-203ENST00000307305 ZSCAN16Q9H4T2 348 aaPredicted RBP13.17□□□□□ -0.3
PHTF2-203ENST00000307305 PRC1O43663 620 aa13.17□□□□□ -0.3
PHTF2-203ENST00000307305 BICDL1Q6ZP65 573 aa13.17□□□□□ -0.3
PHTF2-203ENST00000307305 GJB4Q9NTQ9 266 aa13.17□□□□□ -0.3
PHTF2-203ENST00000307305 CWC25Q9NXE8 425 aaPredicted RBP13.17□□□□□ -0.3
PHTF2-203ENST00000307305 LRP2BPQ9P2M1 347 aa13.17□□□□□ -0.3
PHTF2-203ENST00000307305 TAF6LQ9Y6J9 622 aa13.17□□□□□ -0.3
PHTF2-203ENST00000307305 MARCH6O60337 910 aa13.17□□□□□ -0.3
PHTF2-203ENST00000307305 GTF2F1P35269 517 aaKnown RBP eCLIP13.17□□□□□ -0.3
PHTF2-203ENST00000307305 DHX8Q14562 1220 aaKnown RBP13.17□□□□□ -0.3
PHTF2-203ENST00000307305 GTF3C6Q969F1 213 aa13.17□□□□□ -0.3
PHTF2-203ENST00000307305 TRIM22Q8IYM9 498 aa13.16□□□□□ -0.3
PHTF2-203ENST00000307305 GPHNQ9NQX3 736 aaPredicted RBP13.16□□□□□ -0.3
PHTF2-203ENST00000307305 ABCC3O15438 1527 aa13.16□□□□□ -0.3
PHTF2-203ENST00000307305 NAPBQ9H115 298 aa13.16□□□□□ -0.3
PHTF2-203ENST00000307305 SYKP43405 635 aa13.16□□□□□ -0.3
PHTF2-203ENST00000307305 UBASH3AP57075 661 aa13.16□□□□□ -0.3
PHTF2-203ENST00000307305 SART3Q15020 963 aaKnown RBP13.16□□□□□ -0.3
PHTF2-203ENST00000307305 PDLIM2Q96JY6 352 aa13.16□□□□□ -0.3
PHTF2-203ENST00000307305 ALG1Q9BT22 464 aa13.16□□□□□ -0.3
PHTF2-203ENST00000307305 SASH1O94885 1247 aa13.16□□□□□ -0.3
PHTF2-203ENST00000307305 GNG11P61952 73 aa13.16□□□□□ -0.3
PHTF2-203ENST00000307305 GCKRQ14397 625 aa13.16□□□□□ -0.3
PHTF2-203ENST00000307305 MRVI1Q9Y6F6 885 aa13.16□□□□□ -0.3
PHTF2-203ENST00000307305 KIF24Q5T7B8 1368 aa13.15□□□□□ -0.3
PHTF2-203ENST00000307305 GOLGA8AA7E2F4 631 aa13.15□□□□□ -0.3
PHTF2-203ENST00000307305 SPTLC2O15270 562 aa13.15□□□□□ -0.3
PHTF2-203ENST00000307305 HMGB1P09429 215 aaKnown RBP13.15□□□□□ -0.3
PHTF2-203ENST00000307305 AFMP43652 599 aa13.15□□□□□ -0.3
PHTF2-203ENST00000307305 STX17P56962 302 aa13.15□□□□□ -0.3
PHTF2-203ENST00000307305 CLSTN2Q9H4D0 955 aa13.15□□□□□ -0.3
PHTF2-203ENST00000307305 LAMC1P11047 1609 aa13.15□□□□□ -0.3
PHTF2-203ENST00000307305 ELF2Q15723 593 aa13.15□□□□□ -0.3
PHTF2-203ENST00000307305 SLC9C2Q5TAH2 1124 aa13.15□□□□□ -0.3
PHTF2-203ENST00000307305 ZSCAN25Q6NSZ9 544 aa13.15□□□□□ -0.3
PHTF2-203ENST00000307305 PPFIBP1Q86W92 1011 aa13.15□□□□□ -0.3
PHTF2-203ENST00000307305 CTAGE5O15320 804 aa13.15□□□□□ -0.3
PHTF2-203ENST00000307305 METAP2P50579 478 aaKnown RBP eCLIP13.15□□□□□ -0.3
PHTF2-203ENST00000307305 PHKBQ93100 1093 aa13.15□□□□□ -0.3
PHTF2-203ENST00000307305 RAI14Q9P0K7 980 aa13.15□□□□□ -0.3
PHTF2-203ENST00000307305 TRMT112Q9UI30 125 aaKnown RBP13.15□□□□□ -0.3
PHTF2-203ENST00000307305 DBNLQ9UJU6 430 aaKnown RBP13.15□□□□□ -0.3
PHTF2-203ENST00000307305 SMTNL1A8MU46 457 aa13.15□□□□□ -0.31
PHTF2-203ENST00000307305 IARSP41252 1262 aaKnown RBP13.15□□□□□ -0.31
PHTF2-203ENST00000307305 FAM193AP78312 1265 aa13.15□□□□□ -0.31
PHTF2-203ENST00000307305 TMEM67Q5HYA8 995 aa13.15□□□□□ -0.31
PHTF2-203ENST00000307305 TMCO3Q6UWJ1 677 aa13.15□□□□□ -0.31
PHTF2-203ENST00000307305 AATKQ6ZMQ8 1374 aa13.14□□□□□ -0.31
PHTF2-203ENST00000307305 NAP1L1P55209 391 aaKnown RBP13.14□□□□□ -0.31
PHTF2-203ENST00000307305 CACTINQ8WUQ7 758 aaKnown RBP13.14□□□□□ -0.31
PHTF2-203ENST00000307305 A0A1B0GUL7 405 aa13.14□□□□□ -0.31
PHTF2-203ENST00000307305 GOLGA8FQ08AF8 430 aa13.14□□□□□ -0.31
PHTF2-203ENST00000307305 GOLGA8DPQ0D2H9 430 aa13.14□□□□□ -0.31
PHTF2-203ENST00000307305 KARSQ15046 597 aaKnown RBP13.14□□□□□ -0.31
PHTF2-203ENST00000307305 IGSF1Q8N6C5 1336 aa13.14□□□□□ -0.31
PHTF2-203ENST00000307305 UBAC1Q9BSL1 405 aa13.14□□□□□ -0.31
PHTF2-203ENST00000307305 PPRC1Q5VV67 1664 aaKnown RBP13.14□□□□□ -0.31
PHTF2-203ENST00000307305 ATP10DQ9P241 1426 aa13.14□□□□□ -0.31
PHTF2-203ENST00000307305 CYP21A2P08686 494 aa13.13□□□□□ -0.31
PHTF2-203ENST00000307305 EPHA10Q5JZY3 1008 aa13.13□□□□□ -0.31
PHTF2-203ENST00000307305 UTP14AQ9BVJ6 771 aaKnown RBP13.13□□□□□ -0.31
PHTF2-203ENST00000307305 MAP4K1Q92918 833 aa13.13□□□□□ -0.31
PHTF2-203ENST00000307305 IPO7O95373 1038 aaKnown RBP13.13□□□□□ -0.31
PHTF2-203ENST00000307305 SAMD1Q6SPF0 538 aaPredicted RBP13.13□□□□□ -0.31
PHTF2-203ENST00000307305 C11orf57Q6ZUT1 292 aaPredicted RBP13.13□□□□□ -0.31
PHTF2-203ENST00000307305 ANKRD20A12PQ8NF67 263 aa13.13□□□□□ -0.31
PHTF2-203ENST00000307305 SLC12A7Q9Y666 1083 aa13.13□□□□□ -0.31
PHTF2-203ENST00000307305 hCG_1642624A0A1W2PR95 340 aa13.13□□□□□ -0.31
PHTF2-203ENST00000307305 NEURL1BA8MQ27 555 aa13.13□□□□□ -0.31
PHTF2-203ENST00000307305 RANBP6O60518 1105 aaKnown RBP13.13□□□□□ -0.31
PHTF2-203ENST00000307305 NCOA7Q8NI08 942 aa13.13□□□□□ -0.31
PHTF2-203ENST00000307305 CLSTN1O94985 981 aa13.12□□□□□ -0.31
PHTF2-203ENST00000307305 ZNF215Q9UL58 517 aaPredicted RBP13.12□□□□□ -0.31
PHTF2-203ENST00000307305 TAF5LO75529 589 aa13.12□□□□□ -0.31
PHTF2-203ENST00000307305 SCRN1Q12765 414 aa13.12□□□□□ -0.31
PHTF2-203ENST00000307305 LRRC24Q50LG9 513 aa13.12□□□□□ -0.31
PHTF2-203ENST00000307305 CMTR1Q8N1G2 835 aaKnown RBP13.12□□□□□ -0.31
PHTF2-203ENST00000307305 KIAA1524Q8TCG1 905 aa13.12□□□□□ -0.31
PHTF2-203ENST00000307305 ARHGAP29Q52LW3 1261 aa13.12□□□□□ -0.31
PHTF2-203ENST00000307305 PAXBP1Q9Y5B6 917 aa13.12□□□□□ -0.31
PHTF2-203ENST00000307305 AOX1Q06278 1338 aa13.12□□□□□ -0.31
PHTF2-203ENST00000307305 GPS2Q13227 327 aa13.12□□□□□ -0.31
PHTF2-203ENST00000307305 CLEC17AQ6ZS10 378 aa13.12□□□□□ -0.31
PHTF2-203ENST00000307305 TTLL7Q6ZT98 887 aa13.12□□□□□ -0.31
PHTF2-203ENST00000307305 CAGE1Q8TC20 777 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms