RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 RIMBP2O15034 1052 aa9.78□□□□□ -0.84
TM4SF1-201ENST00000305366 GMPSP49915 693 aaPredicted RBP9.78□□□□□ -0.84
TM4SF1-201ENST00000305366 LBX1P52954 281 aa9.78□□□□□ -0.84
TM4SF1-201ENST00000305366 PDE4CQ08493 712 aa9.78□□□□□ -0.84
TM4SF1-201ENST00000305366 GRIPAP1Q4V328 841 aa9.78□□□□□ -0.84
TM4SF1-201ENST00000305366 ANKRD13DQ6ZTN6 518 aa9.78□□□□□ -0.84
TM4SF1-201ENST00000305366 SP8Q8IXZ3 490 aa9.78□□□□□ -0.84
TM4SF1-201ENST00000305366 DZIP1LQ8IYY4 767 aaKnown RBP9.78□□□□□ -0.84
TM4SF1-201ENST00000305366 SUPT20HQ8NEM7 779 aa9.78□□□□□ -0.84
TM4SF1-201ENST00000305366 ZNF408Q9H9D4 720 aa9.78□□□□□ -0.84
TM4SF1-201ENST00000305366 BABAM1Q9NWV8 329 aa9.78□□□□□ -0.84
TM4SF1-201ENST00000305366 GRAPQ13588 217 aa9.77□□□□□ -0.85
TM4SF1-201ENST00000305366 GRAPLQ8TC17 118 aaPredicted RBP9.77□□□□□ -0.85
TM4SF1-201ENST00000305366 JARID2Q92833 1246 aaPredicted RBP9.77□□□□□ -0.85
TM4SF1-201ENST00000305366 NSFL1CQ9UNZ2 370 aaKnown RBP9.77□□□□□ -0.85
TM4SF1-201ENST00000305366 TNNQ9UQP3 1299 aa9.77□□□□□ -0.85
TM4SF1-201ENST00000305366 WDR33Q9C0J8 1336 aaKnown RBP9.77□□□□□ -0.85
TM4SF1-201ENST00000305366 SHTN1A0MZ66 631 aa9.76□□□□□ -0.85
TM4SF1-201ENST00000305366 C6orf229H3BNL8 230 aa9.76□□□□□ -0.85
TM4SF1-201ENST00000305366 CTCFP49711 727 aaPredicted RBP9.76□□□□□ -0.85
TM4SF1-201ENST00000305366 BRPF1P55201 1214 aaPredicted RBP9.76□□□□□ -0.85
TM4SF1-201ENST00000305366 EXOSC9Q06265 439 aaKnown RBP9.76□□□□□ -0.85
TM4SF1-201ENST00000305366 TAF7LQ5H9L4 462 aa9.76□□□□□ -0.85
TM4SF1-201ENST00000305366 CIAPIN1Q6FI81 312 aa9.76□□□□□ -0.85
TM4SF1-201ENST00000305366 CYP4F22Q6NT55 531 aa9.76□□□□□ -0.85
TM4SF1-201ENST00000305366 USP50Q70EL3 339 aaPredicted RBP9.76□□□□□ -0.85
TM4SF1-201ENST00000305366 PLBD2Q8NHP8 589 aa9.76□□□□□ -0.85
TM4SF1-201ENST00000305366 GPRC5DQ9NZD1 345 aa9.76□□□□□ -0.85
TM4SF1-201ENST00000305366 ZBTB12Q9Y330 459 aaPredicted RBP9.76□□□□□ -0.85
TM4SF1-201ENST00000305366 COL4A5P29400 1685 aa9.76□□□□□ -0.85
TM4SF1-201ENST00000305366 FER1L6Q2WGJ9 1857 aa9.76□□□□□ -0.85
TM4SF1-201ENST00000305366 IBTKQ9P2D0 1353 aaPredicted RBP9.76□□□□□ -0.85
TM4SF1-201ENST00000305366 BCORQ6W2J9 1755 aa9.76□□□□□ -0.85
TM4SF1-201ENST00000305366 HDAC1Q13547 482 aaPredicted RBP9.75□□□□□ -0.85
TM4SF1-201ENST00000305366 DOK7Q18PE1 504 aa9.75□□□□□ -0.85
TM4SF1-201ENST00000305366 ALDH1L2Q3SY69 923 aa9.75□□□□□ -0.85
TM4SF1-201ENST00000305366 RBM26Q5T8P6 1007 aaKnown RBP9.75□□□□□ -0.85
TM4SF1-201ENST00000305366 CST9Q5W186 159 aa9.75□□□□□ -0.85
TM4SF1-201ENST00000305366 DLK2Q6UY11 383 aa9.75□□□□□ -0.85
TM4SF1-201ENST00000305366 RIC3Q7Z5B4 369 aa9.75□□□□□ -0.85
TM4SF1-201ENST00000305366 FTSJ3Q8IY81 847 aaKnown RBP9.75□□□□□ -0.85
TM4SF1-201ENST00000305366 CELF1Q92879 486 aaKnown RBP9.75□□□□□ -0.85
TM4SF1-201ENST00000305366 TSR2Q969E8 191 aaKnown RBP9.75□□□□□ -0.85
TM4SF1-201ENST00000305366 GPR101Q96P66 508 aaPredicted RBP9.75□□□□□ -0.85
TM4SF1-201ENST00000305366 CCDC85AQ96PX6 553 aaPredicted RBP9.75□□□□□ -0.85
TM4SF1-201ENST00000305366 GLIS2Q9BZE0 524 aaPredicted RBP9.75□□□□□ -0.85
TM4SF1-201ENST00000305366 ADARB2Q9NS39 739 aaKnown RBP9.75□□□□□ -0.85
TM4SF1-201ENST00000305366 SMC4Q9NTJ3 1288 aa9.75□□□□□ -0.85
TM4SF1-201ENST00000305366 WBP1LQ9NX94 342 aa9.75□□□□□ -0.85
TM4SF1-201ENST00000305366 DBF4Q9UBU7 674 aaPredicted RBP9.75□□□□□ -0.85
TM4SF1-201ENST00000305366 KIF16BQ96L93 1317 aa9.75□□□□□ -0.85
TM4SF1-201ENST00000305366 SNED1Q8TER0 1413 aa9.75□□□□□ -0.85
TM4SF1-201ENST00000305366 RASSF10A6NK89 507 aa9.75□□□□□ -0.85
TM4SF1-201ENST00000305366 CELF2O95319 508 aaKnown RBP9.75□□□□□ -0.85
TM4SF1-201ENST00000305366 TRIM27P14373 513 aa9.75□□□□□ -0.85
TM4SF1-201ENST00000305366 TNIP1Q15025 636 aa9.75□□□□□ -0.85
TM4SF1-201ENST00000305366 WASHC4Q2M389 1173 aa9.75□□□□□ -0.85
TM4SF1-201ENST00000305366 ATF7IPQ6VMQ6 1270 aa9.75□□□□□ -0.85
TM4SF1-201ENST00000305366 SSH1Q8WYL5 1049 aa9.75□□□□□ -0.85
TM4SF1-201ENST00000305366 CAPNS2Q96L46 248 aa9.75□□□□□ -0.85
TM4SF1-201ENST00000305366 PHAXQ9H814 394 aaKnown RBP9.75□□□□□ -0.85
TM4SF1-201ENST00000305366 DBNDD1Q9H9R9 158 aa9.75□□□□□ -0.85
TM4SF1-201ENST00000305366 MBIPQ9NS73 344 aa9.75□□□□□ -0.85
TM4SF1-201ENST00000305366 CNOT7Q9UIV1 285 aaKnown RBP9.75□□□□□ -0.85
TM4SF1-201ENST00000305366 TSKSQ9UJT2 592 aa9.75□□□□□ -0.85
TM4SF1-201ENST00000305366 DDX19BQ9UMR2 479 aa9.75□□□□□ -0.85
TM4SF1-201ENST00000305366 CCDC88AQ3V6T2 1871 aa9.74□□□□□ -0.85
TM4SF1-201ENST00000305366 IRS4O14654 1257 aaPredicted RBP9.74□□□□□ -0.85
TM4SF1-201ENST00000305366 AOC2O75106 756 aa9.74□□□□□ -0.85
TM4SF1-201ENST00000305366 GPSM2P81274 684 aa9.74□□□□□ -0.85
TM4SF1-201ENST00000305366 KIAA2012Q0VF49 1180 aa9.74□□□□□ -0.85
TM4SF1-201ENST00000305366 CFAP44Q96MT7 982 aa9.74□□□□□ -0.85
TM4SF1-201ENST00000305366 RTFDC1Q9BY42 306 aaPredicted RBP9.74□□□□□ -0.85
TM4SF1-201ENST00000305366 KCNQ5Q9NR82 932 aa9.74□□□□□ -0.85
TM4SF1-201ENST00000305366 HYPKQ9NX55 129 aa9.74□□□□□ -0.85
TM4SF1-201ENST00000305366 YDJCA8MPS7 323 aa9.73□□□□□ -0.85
TM4SF1-201ENST00000305366 G3V3G9 751 aa9.73□□□□□ -0.85
TM4SF1-201ENST00000305366 H7C1D1 291 aa9.73□□□□□ -0.85
TM4SF1-201ENST00000305366 IPO8O15397 1037 aaKnown RBP9.73□□□□□ -0.85
TM4SF1-201ENST00000305366 HIRAP54198 1017 aaPredicted RBP9.73□□□□□ -0.85
TM4SF1-201ENST00000305366 MAP2K1Q02750 393 aaPredicted RBP9.73□□□□□ -0.85
TM4SF1-201ENST00000305366 CALD1Q05682 793 aaKnown RBP9.73□□□□□ -0.85
TM4SF1-201ENST00000305366 DCAF8Q5TAQ9 597 aa9.73□□□□□ -0.85
TM4SF1-201ENST00000305366 SAMD7Q7Z3H4 446 aa9.73□□□□□ -0.85
TM4SF1-201ENST00000305366 USP48Q86UV5 1035 aa9.73□□□□□ -0.85
TM4SF1-201ENST00000305366 TRPM4Q8TD43 1214 aa9.73□□□□□ -0.85
TM4SF1-201ENST00000305366 MYD88Q99836 296 aa9.73□□□□□ -0.85
TM4SF1-201ENST00000305366 ISCA1Q9BUE6 129 aa9.73□□□□□ -0.85
TM4SF1-201ENST00000305366 BEGAINQ9BUH8 593 aa9.73□□□□□ -0.85
TM4SF1-201ENST00000305366 VPS33BQ9H267 617 aa9.73□□□□□ -0.85
TM4SF1-201ENST00000305366 RIC1Q4ADV7 1423 aa9.73□□□□□ -0.85
TM4SF1-201ENST00000305366 TBC1D10BQ4KMP7 808 aaPredicted RBP9.73□□□□□ -0.85
TM4SF1-201ENST00000305366 MICALL2Q8IY33 904 aa9.73□□□□□ -0.85
TM4SF1-201ENST00000305366 PRDM10Q9NQV6 1147 aa9.73□□□□□ -0.85
TM4SF1-201ENST00000305366 SEC31BQ9NQW1 1179 aa9.73□□□□□ -0.85
TM4SF1-201ENST00000305366 POLLQ9UGP5 575 aa9.73□□□□□ -0.85
TM4SF1-201ENST00000305366 CACNA1SQ13698 1873 aa9.73□□□□□ -0.85
TM4SF1-201ENST00000305366 PSMD14O00487 310 aa9.72□□□□□ -0.85
TM4SF1-201ENST00000305366 HSPA8P11142 646 aaKnown RBP9.72□□□□□ -0.85
TM4SF1-201ENST00000305366 ECE1P42892 770 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 172.8 ms