RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 STAT6P42226 847 aa15.95■□□□□ 0.14
PRKCB-201ENST00000303531 LMAN1P49257 510 aa15.95■□□□□ 0.14
PRKCB-201ENST00000303531 STXBP4Q6ZWJ1 553 aa15.95■□□□□ 0.14
PRKCB-201ENST00000303531 DCTPP1Q9H773 170 aa15.95■□□□□ 0.14
PRKCB-201ENST00000303531 UGGT2Q9NYU1 1516 aa15.95■□□□□ 0.14
PRKCB-201ENST00000303531 PRC1O43663 620 aa15.94■□□□□ 0.14
PRKCB-201ENST00000303531 TMTC2Q8N394 836 aa15.94■□□□□ 0.14
PRKCB-201ENST00000303531 CTAGE1Q96RT6 745 aa15.94■□□□□ 0.14
PRKCB-201ENST00000303531 BMP15O95972 392 aa15.94■□□□□ 0.14
PRKCB-201ENST00000303531 RAB3GAP1Q15042 981 aa15.94■□□□□ 0.14
PRKCB-201ENST00000303531 POLKQ9UBT6 870 aa15.94■□□□□ 0.14
PRKCB-201ENST00000303531 GIMAP7Q8NHV1 300 aa15.94■□□□□ 0.14
PRKCB-201ENST00000303531 HLA-DOAP06340 250 aa15.94■□□□□ 0.14
PRKCB-201ENST00000303531 IL15P40933 162 aaPredicted RBP15.94■□□□□ 0.14
PRKCB-201ENST00000303531 BIVM-ERCC5R4GMW8 1640 aa15.94■□□□□ 0.14
PRKCB-201ENST00000303531 MTHFSDQ2M296 383 aaKnown RBP15.94■□□□□ 0.14
PRKCB-201ENST00000303531 DNAI1Q9UI46 699 aa15.94■□□□□ 0.14
PRKCB-201ENST00000303531 IQSEC3Q9UPP2 1182 aaPredicted RBP15.94■□□□□ 0.14
PRKCB-201ENST00000303531 AK2P54819 239 aa15.94■□□□□ 0.14
PRKCB-201ENST00000303531 AKAP4Q5JQC9 854 aa15.94■□□□□ 0.14
PRKCB-201ENST00000303531 ZRANB1Q9UGI0 708 aa15.94■□□□□ 0.14
PRKCB-201ENST00000303531 VAMP4O75379 141 aa15.93■□□□□ 0.14
PRKCB-201ENST00000303531 FEZ1Q99689 392 aa15.93■□□□□ 0.14
PRKCB-201ENST00000303531 TSPY3P0CV98 308 aa15.93■□□□□ 0.14
PRKCB-201ENST00000303531 TSPY8P0CW00 308 aa15.93■□□□□ 0.14
PRKCB-201ENST00000303531 UBE4AQ14139 1066 aa15.93■□□□□ 0.14
PRKCB-201ENST00000303531 SLC9C2Q5TAH2 1124 aa15.93■□□□□ 0.14
PRKCB-201ENST00000303531 PAG1Q9NWQ8 432 aa15.93■□□□□ 0.14
PRKCB-201ENST00000303531 URB2Q14146 1524 aaKnown RBP15.93■□□□□ 0.14
PRKCB-201ENST00000303531 RNF216Q9NWF9 866 aaPredicted RBP15.93■□□□□ 0.14
PRKCB-201ENST00000303531 TTC41PQ6P2S7 1318 aa15.93■□□□□ 0.14
PRKCB-201ENST00000303531 DUOX2Q9NRD8 1548 aa15.93■□□□□ 0.14
PRKCB-201ENST00000303531 CCDC175P0C221 793 aa15.93■□□□□ 0.14
PRKCB-201ENST00000303531 SMC5Q8IY18 1101 aa15.93■□□□□ 0.14
PRKCB-201ENST00000303531 SAMM50Q9Y512 469 aa15.93■□□□□ 0.14
PRKCB-201ENST00000303531 RTL1A6NKG5 1358 aa15.93■□□□□ 0.14
PRKCB-201ENST00000303531 WDR78Q5VTH9 848 aa15.93■□□□□ 0.14
PRKCB-201ENST00000303531 TTC12Q9H892 705 aaPredicted RBP15.93■□□□□ 0.14
PRKCB-201ENST00000303531 ZGPATQ8N5A5 531 aaKnown RBP15.92■□□□□ 0.14
PRKCB-201ENST00000303531 CABP5Q9NP86 173 aa15.92■□□□□ 0.14
PRKCB-201ENST00000303531 ZBTB40Q9NUA8 1239 aa15.92■□□□□ 0.14
PRKCB-201ENST00000303531 ZKSCAN5Q9Y2L8 839 aa15.92■□□□□ 0.14
PRKCB-201ENST00000303531 TBCAO75347 108 aaKnown RBP15.92■□□□□ 0.14
PRKCB-201ENST00000303531 GSTO1P78417 241 aa15.92■□□□□ 0.14
PRKCB-201ENST00000303531 NGLY1Q96IV0 654 aa15.92■□□□□ 0.14
PRKCB-201ENST00000303531 FAM107BQ9H098 131 aa15.92■□□□□ 0.14
PRKCB-201ENST00000303531 TYRO3Q06418 890 aa15.92■□□□□ 0.14
PRKCB-201ENST00000303531 MMRN2Q9H8L6 949 aa15.92■□□□□ 0.14
PRKCB-201ENST00000303531 TNRQ92752 1358 aa15.92■□□□□ 0.14
PRKCB-201ENST00000303531 RAPGEF6Q8TEU7 1601 aa15.92■□□□□ 0.14
PRKCB-201ENST00000303531 PLEKHM2Q8IWE5 1019 aa15.92■□□□□ 0.14
PRKCB-201ENST00000303531 SYT1P21579 422 aa15.91■□□□□ 0.14
PRKCB-201ENST00000303531 KRT24Q2M2I5 525 aa15.91■□□□□ 0.14
PRKCB-201ENST00000303531 ZCRB1Q8TBF4 217 aaKnown RBP15.91■□□□□ 0.14
PRKCB-201ENST00000303531 SPTLC2O15270 562 aa15.91■□□□□ 0.14
PRKCB-201ENST00000303531 CYLC1P35663 651 aaPredicted RBP15.91■□□□□ 0.14
PRKCB-201ENST00000303531 NBPF6Q5VWK0 638 aa15.91■□□□□ 0.14
PRKCB-201ENST00000303531 HEATR3Q7Z4Q2 680 aa15.91■□□□□ 0.14
PRKCB-201ENST00000303531 NBPF5PQ86XG9 351 aaPredicted RBP15.91■□□□□ 0.14
PRKCB-201ENST00000303531 NBPF4Q96M43 638 aa15.91■□□□□ 0.14
PRKCB-201ENST00000303531 ZNF608Q9ULD9 1512 aaPredicted RBP15.91■□□□□ 0.14
PRKCB-201ENST00000303531 CREB3L3Q68CJ9 461 aa15.91■□□□□ 0.14
PRKCB-201ENST00000303531 CKAP4Q07065 602 aaKnown RBP15.91■□□□□ 0.14
PRKCB-201ENST00000303531 CHST3Q7LGC8 479 aa15.91■□□□□ 0.14
PRKCB-201ENST00000303531 ITSN2Q9NZM3 1697 aa15.9■□□□□ 0.14
PRKCB-201ENST00000303531 SPAG1Q07617 926 aa15.9■□□□□ 0.14
PRKCB-201ENST00000303531 CTAGE15A4D2H0 777 aa15.9■□□□□ 0.14
PRKCB-201ENST00000303531 CTAGE8P0CG41 777 aa15.9■□□□□ 0.14
PRKCB-201ENST00000303531 IFI16Q16666 785 aaKnown RBP15.9■□□□□ 0.14
PRKCB-201ENST00000303531 CTAGE6Q86UF2 777 aa15.9■□□□□ 0.14
PRKCB-201ENST00000303531 CTAGE4Q8IX94 777 aa15.9■□□□□ 0.14
PRKCB-201ENST00000303531 KRT222Q8N1A0 295 aa15.9■□□□□ 0.14
PRKCB-201ENST00000303531 ZHX1Q9UKY1 873 aaPredicted RBP15.9■□□□□ 0.14
PRKCB-201ENST00000303531 SEC24BO95487 1268 aa15.9■□□□□ 0.14
PRKCB-201ENST00000303531 LMOD1P29536 600 aaPredicted RBP15.9■□□□□ 0.14
PRKCB-201ENST00000303531 LINS1Q8NG48 757 aa15.9■□□□□ 0.14
PRKCB-201ENST00000303531 SPAG5Q96R06 1193 aa15.9■□□□□ 0.14
PRKCB-201ENST00000303531 RFC4P35249 363 aa15.9■□□□□ 0.14
PRKCB-201ENST00000303531 CWF19L2Q2TBE0 894 aaKnown RBP15.9■□□□□ 0.14
PRKCB-201ENST00000303531 DHX58Q96C10 678 aa15.9■□□□□ 0.14
PRKCB-201ENST00000303531 APOBRQ0VD83 1088 aa15.89■□□□□ 0.14
PRKCB-201ENST00000303531 HSF2BPO75031 334 aa15.89■□□□□ 0.13
PRKCB-201ENST00000303531 ERMNQ8TAM6 284 aa15.89■□□□□ 0.13
PRKCB-201ENST00000303531 NAA16Q6N069 864 aaPredicted RBP15.89■□□□□ 0.13
PRKCB-201ENST00000303531 FERMT2Q96AC1 680 aa15.89■□□□□ 0.13
PRKCB-201ENST00000303531 DRC1Q96MC2 740 aa15.89■□□□□ 0.13
PRKCB-201ENST00000303531 EIF2AK4Q9P2K8 1649 aaKnown RBP15.89■□□□□ 0.13
PRKCB-201ENST00000303531 SYCP2Q9BX26 1530 aa15.89■□□□□ 0.13
PRKCB-201ENST00000303531 ARFGAP3Q9NP61 516 aa15.89■□□□□ 0.13
PRKCB-201ENST00000303531 PUF60Q9UHX1 559 aaKnown RBP15.89■□□□□ 0.13
PRKCB-201ENST00000303531 PSMA7O14818 248 aa15.89■□□□□ 0.13
PRKCB-201ENST00000303531 PTGS1P23219 599 aa15.89■□□□□ 0.13
PRKCB-201ENST00000303531 CHMLP26374 656 aa15.89■□□□□ 0.13
PRKCB-201ENST00000303531 SBNO2Q9Y2G9 1366 aa15.88■□□□□ 0.13
PRKCB-201ENST00000303531 PIK3C2GO75747 1445 aa15.88■□□□□ 0.13
PRKCB-201ENST00000303531 RNF113AO15541 343 aaKnown RBP15.88■□□□□ 0.13
PRKCB-201ENST00000303531 CEP112Q8N8E3 955 aa15.88■□□□□ 0.13
PRKCB-201ENST00000303531 TESK2Q96S53 571 aa15.88■□□□□ 0.13
PRKCB-201ENST00000303531 RUFY3Q7L099 469 aa15.88■□□□□ 0.13
PRKCB-201ENST00000303531 CADPS2Q86UW7 1296 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms