RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 MPNDQ8N594 471 aa30.45■■■□□ 2.47
HOXC9-201ENST00000303450 SSH3Q8TE77 659 aa30.45■■■□□ 2.47
HOXC9-201ENST00000303450 COPRSQ9NQ92 184 aa30.45■■■□□ 2.47
HOXC9-201ENST00000303450 ANKIB1Q9P2G1 1089 aa30.45■■■□□ 2.47
HOXC9-201ENST00000303450 NSFL1CQ9UNZ2 370 aaKnown RBP30.45■■■□□ 2.47
HOXC9-201ENST00000303450 POLA2Q14181 598 aa30.44■■■□□ 2.46
HOXC9-201ENST00000303450 DPP8Q6V1X1 898 aaPredicted RBP30.44■■■□□ 2.46
HOXC9-201ENST00000303450 PUS3Q9BZE2 481 aaKnown RBP30.44■■■□□ 2.46
HOXC9-201ENST00000303450 PA2G4Q9UQ80 394 aaKnown RBP30.44■■■□□ 2.46
HOXC9-201ENST00000303450 SIL1Q9H173 461 aa30.43■■■□□ 2.46
HOXC9-201ENST00000303450 EYA2O00167 538 aa30.42■■■□□ 2.46
HOXC9-201ENST00000303450 HMMRO75330 724 aa30.42■■■□□ 2.46
HOXC9-201ENST00000303450 GPSM2P81274 684 aa30.42■■■□□ 2.46
HOXC9-201ENST00000303450 LRRC24Q50LG9 513 aa30.42■■■□□ 2.46
HOXC9-201ENST00000303450 FER1L6Q2WGJ9 1857 aa30.42■■■□□ 2.46
HOXC9-201ENST00000303450 UTRNP46939 3433 aa30.42■■■□□ 2.46
HOXC9-201ENST00000303450 CHRNDQ07001 517 aa30.42■■■□□ 2.46
HOXC9-201ENST00000303450 ANKRD2Q9GZV1 360 aa30.42■■■□□ 2.46
HOXC9-201ENST00000303450 TAOK3Q9H2K8 898 aa30.42■■■□□ 2.46
HOXC9-201ENST00000303450 FBXO3Q9UK99 471 aa30.42■■■□□ 2.46
HOXC9-201ENST00000303450 XDHP47989 1333 aa30.41■■■□□ 2.46
HOXC9-201ENST00000303450 RIPOR2Q9Y4F9 1068 aa30.41■■■□□ 2.46
HOXC9-201ENST00000303450 SNED1Q8TER0 1413 aa30.4■■■□□ 2.46
HOXC9-201ENST00000303450 NFKBIEO00221 500 aa30.4■■■□□ 2.46
HOXC9-201ENST00000303450 FKBP4Q02790 459 aaKnown RBP eCLIP30.4■■■□□ 2.46
HOXC9-201ENST00000303450 MROH5Q6ZUA9 1318 aa30.39■■■□□ 2.46
HOXC9-201ENST00000303450 CIAO1O76071 339 aa30.39■■■□□ 2.46
HOXC9-201ENST00000303450 SIRT2Q8IXJ6 389 aa30.39■■■□□ 2.46
HOXC9-201ENST00000303450 PSMD1Q99460 953 aa30.39■■■□□ 2.46
HOXC9-201ENST00000303450 PODXL2Q9NZ53 605 aa30.39■■■□□ 2.46
HOXC9-201ENST00000303450 RASSF7Q02833 373 aa30.38■■■□□ 2.45
HOXC9-201ENST00000303450 PCDHB15Q9Y5E8 787 aa30.38■■■□□ 2.45
HOXC9-201ENST00000303450 G3BP1Q13283 466 aaKnown RBP eCLIP30.37■■■□□ 2.45
HOXC9-201ENST00000303450 METTL24Q5JXM2 366 aa30.37■■■□□ 2.45
HOXC9-201ENST00000303450 SUPT20HQ8NEM7 779 aa30.37■■■□□ 2.45
HOXC9-201ENST00000303450 HELBQ8NG08 1087 aaPredicted RBP30.37■■■□□ 2.45
HOXC9-201ENST00000303450 GGA1Q9UJY5 639 aa30.37■■■□□ 2.45
HOXC9-201ENST00000303450 LTBP3Q9NS15 1303 aa30.37■■■□□ 2.45
HOXC9-201ENST00000303450 C6orf229H3BNL8 230 aa30.37■■■□□ 2.45
HOXC9-201ENST00000303450 SURF6O75683 361 aaKnown RBP30.37■■■□□ 2.45
HOXC9-201ENST00000303450 IL15P40933 162 aaPredicted RBP30.37■■■□□ 2.45
HOXC9-201ENST00000303450 ATG9AQ7Z3C6 839 aa30.37■■■□□ 2.45
HOXC9-201ENST00000303450 TAF5LO75529 589 aa30.36■■■□□ 2.45
HOXC9-201ENST00000303450 UFL1O94874 794 aa30.36■■■□□ 2.45
HOXC9-201ENST00000303450 NEFLP07196 543 aa30.36■■■□□ 2.45
HOXC9-201ENST00000303450 RTFDC1Q9BY42 306 aaPredicted RBP30.36■■■□□ 2.45
HOXC9-201ENST00000303450 ATP2B4P23634 1241 aa30.35■■■□□ 2.45
HOXC9-201ENST00000303450 TBC1D16Q8TBP0 767 aa30.35■■■□□ 2.45
HOXC9-201ENST00000303450 POLLQ9UGP5 575 aa30.35■■■□□ 2.45
HOXC9-201ENST00000303450 LTBP1Q14766 1721 aa30.34■■■□□ 2.45
HOXC9-201ENST00000303450 KCNJ4P48050 445 aa30.34■■■□□ 2.45
HOXC9-201ENST00000303450 OS9Q13438 667 aaPredicted RBP30.34■■■□□ 2.45
HOXC9-201ENST00000303450 ZNF277Q9NRM2 450 aaPredicted RBP30.34■■■□□ 2.45
HOXC9-201ENST00000303450 LEMD3Q9Y2U8 911 aa30.34■■■□□ 2.45
HOXC9-201ENST00000303450 NOP58Q9Y2X3 529 aaKnown RBP30.33■■■□□ 2.45
HOXC9-201ENST00000303450 EYA3Q99504 573 aa30.32■■■□□ 2.44
HOXC9-201ENST00000303450 CEP126Q9P2H0 1117 aa30.32■■■□□ 2.44
HOXC9-201ENST00000303450 A0A1B0GUL6 1792 aa30.32■■■□□ 2.44
HOXC9-201ENST00000303450 DUOX1Q9NRD9 1551 aa30.32■■■□□ 2.44
HOXC9-201ENST00000303450 ZNF804BA4D1E1 1349 aa30.31■■■□□ 2.44
HOXC9-201ENST00000303450 PDE8BO95263 885 aa30.31■■■□□ 2.44
HOXC9-201ENST00000303450 LMNB1P20700 586 aa30.31■■■□□ 2.44
HOXC9-201ENST00000303450 EXOC6BQ9Y2D4 811 aa30.31■■■□□ 2.44
HOXC9-201ENST00000303450 WTIPA6NIX2 430 aaPredicted RBP30.3■■■□□ 2.44
HOXC9-201ENST00000303450 IARSP41252 1262 aaKnown RBP30.3■■■□□ 2.44
HOXC9-201ENST00000303450 WASHC4Q2M389 1173 aa30.3■■■□□ 2.44
HOXC9-201ENST00000303450 VGLL2Q8N8G2 317 aa30.3■■■□□ 2.44
HOXC9-201ENST00000303450 SBF1O95248 1867 aa30.29■■■□□ 2.44
HOXC9-201ENST00000303450 CCDC88AQ3V6T2 1871 aa30.29■■■□□ 2.44
HOXC9-201ENST00000303450 HSP90AB4PQ58FF6 505 aa30.29■■■□□ 2.44
HOXC9-201ENST00000303450 GPR101Q96P66 508 aaPredicted RBP30.29■■■□□ 2.44
HOXC9-201ENST00000303450 VPS33BQ9H267 617 aa30.29■■■□□ 2.44
HOXC9-201ENST00000303450 SNAP23O00161 211 aa30.28■■■□□ 2.44
HOXC9-201ENST00000303450 PPIP5K2O43314 1243 aa30.28■■■□□ 2.44
HOXC9-201ENST00000303450 ZC3H12CQ9C0D7 883 aaKnown RBP30.28■■■□□ 2.44
HOXC9-201ENST00000303450 RIMBP2O15034 1052 aa30.27■■■□□ 2.44
HOXC9-201ENST00000303450 PRELPP51888 382 aa30.27■■■□□ 2.44
HOXC9-201ENST00000303450 TFCP2Q12800 502 aa30.27■■■□□ 2.44
HOXC9-201ENST00000303450 UBE4AQ14139 1066 aa30.27■■■□□ 2.44
HOXC9-201ENST00000303450 AOC3Q16853 763 aa30.27■■■□□ 2.44
HOXC9-201ENST00000303450 LARGE2Q8N3Y3 721 aa30.27■■■□□ 2.44
HOXC9-201ENST00000303450 RNF181Q9P0P0 153 aa30.27■■■□□ 2.44
HOXC9-201ENST00000303450 SASH1O94885 1247 aa30.26■■■□□ 2.43
HOXC9-201ENST00000303450 KIAA2012Q0VF49 1180 aa30.26■■■□□ 2.43
HOXC9-201ENST00000303450 PUM3Q15397 648 aaKnown RBP30.26■■■□□ 2.43
HOXC9-201ENST00000303450 C9orf131Q5VYM1 1079 aa30.26■■■□□ 2.43
HOXC9-201ENST00000303450 ERC1Q8IUD2 1116 aa30.26■■■□□ 2.43
HOXC9-201ENST00000303450 HDAC1Q13547 482 aaPredicted RBP30.24■■■□□ 2.43
HOXC9-201ENST00000303450 JDP2Q8WYK2 163 aa30.24■■■□□ 2.43
HOXC9-201ENST00000303450 MED23Q9ULK4 1368 aa30.24■■■□□ 2.43
HOXC9-201ENST00000303450 RWDD1Q9H446 243 aaPredicted RBP30.23■■■□□ 2.43
HOXC9-201ENST00000303450 DCTPP1Q9H773 170 aa30.23■■■□□ 2.43
HOXC9-201ENST00000303450 AKAP2Q9Y2D5 859 aa30.23■■■□□ 2.43
HOXC9-201ENST00000303450 APBB1O00213 710 aa30.22■■■□□ 2.43
HOXC9-201ENST00000303450 RAB11FIP3O75154 756 aa30.22■■■□□ 2.43
HOXC9-201ENST00000303450 ATP2B3Q16720 1220 aa30.22■■■□□ 2.43
HOXC9-201ENST00000303450 G3V3G9 751 aa30.22■■■□□ 2.43
HOXC9-201ENST00000303450 IFIT1P09914 478 aaKnown RBP30.22■■■□□ 2.43
HOXC9-201ENST00000303450 SLC5A1P13866 664 aa30.22■■■□□ 2.43
HOXC9-201ENST00000303450 KLRK1P26718 216 aa30.22■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms