RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 GPR108Q9NPR9 543 aa16.08■□□□□ 0.17
CDH8-201ENST00000299345 LMTK3Q96Q04 1460 aa16.08■□□□□ 0.16
CDH8-201ENST00000299345 JAK2O60674 1132 aa16.08■□□□□ 0.16
CDH8-201ENST00000299345 ST3GAL1Q11201 340 aa16.08■□□□□ 0.16
CDH8-201ENST00000299345 TCIRG1Q13488 830 aa16.08■□□□□ 0.16
CDH8-201ENST00000299345 CAMK4Q16566 473 aa16.08■□□□□ 0.16
CDH8-201ENST00000299345 DHX32Q7L7V1 743 aaKnown RBP16.08■□□□□ 0.16
CDH8-201ENST00000299345 ATG9AQ7Z3C6 839 aa16.08■□□□□ 0.16
CDH8-201ENST00000299345 FAM89AQ96GI7 184 aa16.08■□□□□ 0.16
CDH8-201ENST00000299345 PUS3Q9BZE2 481 aaKnown RBP16.08■□□□□ 0.16
CDH8-201ENST00000299345 RNF113AO15541 343 aaKnown RBP16.07■□□□□ 0.16
CDH8-201ENST00000299345 GPTP24298 496 aa16.07■□□□□ 0.16
CDH8-201ENST00000299345 USPL1Q5W0Q7 1092 aa16.07■□□□□ 0.16
CDH8-201ENST00000299345 DNAJC10Q8IXB1 793 aa16.07■□□□□ 0.16
CDH8-201ENST00000299345 CHMP4CQ96CF2 233 aa16.07■□□□□ 0.16
CDH8-201ENST00000299345 COL9A3Q14050 684 aaPredicted RBP16.07■□□□□ 0.16
CDH8-201ENST00000299345 GTF3C6Q969F1 213 aa16.07■□□□□ 0.16
CDH8-201ENST00000299345 PLEKHG2Q9H7P9 1386 aa16.07■□□□□ 0.16
CDH8-201ENST00000299345 TUBGCP6Q96RT7 1819 aa16.07■□□□□ 0.16
CDH8-201ENST00000299345 MCM5P33992 734 aa16.07■□□□□ 0.16
CDH8-201ENST00000299345 CEBPZQ03701 1054 aaKnown RBP16.07■□□□□ 0.16
CDH8-201ENST00000299345 MAP3K11Q16584 847 aa16.07■□□□□ 0.16
CDH8-201ENST00000299345 TTC6Q86TZ1 520 aa16.07■□□□□ 0.16
CDH8-201ENST00000299345 TNMDQ9H2S6 317 aa16.07■□□□□ 0.16
CDH8-201ENST00000299345 ALDH8A1Q9H2A2 487 aaPredicted RBP16.06■□□□□ 0.16
CDH8-201ENST00000299345 ZNF609O15014 1411 aa16.06■□□□□ 0.16
CDH8-201ENST00000299345 CCT2P78371 535 aaKnown RBP16.06■□□□□ 0.16
CDH8-201ENST00000299345 SLFNL1Q499Z3 407 aa16.06■□□□□ 0.16
CDH8-201ENST00000299345 CNNM1Q9NRU3 951 aa16.06■□□□□ 0.16
CDH8-201ENST00000299345 CTNNA3Q9UI47 895 aa16.06■□□□□ 0.16
CDH8-201ENST00000299345 COL15A1P39059 1388 aa16.06■□□□□ 0.16
CDH8-201ENST00000299345 RFX7Q2KHR2 1363 aa16.06■□□□□ 0.16
CDH8-201ENST00000299345 ADCY5O95622 1261 aa16.06■□□□□ 0.16
CDH8-201ENST00000299345 METTL24Q5JXM2 366 aa16.06■□□□□ 0.16
CDH8-201ENST00000299345 R3HCC1Q9Y3T6 440 aaKnown RBP16.06■□□□□ 0.16
CDH8-201ENST00000299345 CFAP45Q9UL16 551 aa16.05■□□□□ 0.16
CDH8-201ENST00000299345 SH3TC1Q8TE82 1336 aa16.05■□□□□ 0.16
CDH8-201ENST00000299345 DSCC1Q9BVC3 393 aa16.05■□□□□ 0.16
CDH8-201ENST00000299345 APOBRQ0VD83 1088 aa16.05■□□□□ 0.16
CDH8-201ENST00000299345 ATG3Q9NT62 314 aa16.05■□□□□ 0.16
CDH8-201ENST00000299345 ASAP1Q9ULH1 1129 aa16.05■□□□□ 0.16
CDH8-201ENST00000299345 OFD1O75665 1012 aa16.04■□□□□ 0.16
CDH8-201ENST00000299345 CIAO1O76071 339 aa16.04■□□□□ 0.16
CDH8-201ENST00000299345 ZMYM1Q5SVZ6 1142 aa16.04■□□□□ 0.16
CDH8-201ENST00000299345 LDHAL6AQ6ZMR3 332 aa16.04■□□□□ 0.16
CDH8-201ENST00000299345 ALS2Q96Q42 1657 aa16.04■□□□□ 0.16
CDH8-201ENST00000299345 HMGN5P82970 282 aaKnown RBP16.04■□□□□ 0.16
CDH8-201ENST00000299345 NKX1-1Q15270 411 aaPredicted RBP16.04■□□□□ 0.16
CDH8-201ENST00000299345 RALYLQ86SE5 291 aaKnown RBP16.04■□□□□ 0.16
CDH8-201ENST00000299345 DACT1Q9NYF0 836 aa16.04■□□□□ 0.16
CDH8-201ENST00000299345 CAMTA1Q9Y6Y1 1673 aa16.04■□□□□ 0.16
CDH8-201ENST00000299345 HSPD1P10809 573 aaKnown RBP16.04■□□□□ 0.16
CDH8-201ENST00000299345 IMMTQ16891 758 aaKnown RBP16.04■□□□□ 0.16
CDH8-201ENST00000299345 CHST3Q7LGC8 479 aa16.04■□□□□ 0.16
CDH8-201ENST00000299345 CKAP2LQ8IYA6 745 aa16.04■□□□□ 0.16
CDH8-201ENST00000299345 XAGE2Q96GT9 111 aa16.04■□□□□ 0.16
CDH8-201ENST00000299345 PPFIA3O75145 1194 aa16.03■□□□□ 0.16
CDH8-201ENST00000299345 HAND2P61296 217 aa16.03■□□□□ 0.16
CDH8-201ENST00000299345 SASS6Q6UVJ0 657 aa16.03■□□□□ 0.16
CDH8-201ENST00000299345 ZSCAN16Q9H4T2 348 aaPredicted RBP16.03■□□□□ 0.16
CDH8-201ENST00000299345 TAOK2Q9UL54 1235 aa16.03■□□□□ 0.16
CDH8-201ENST00000299345 BTG4Q9NY30 223 aa16.03■□□□□ 0.16
CDH8-201ENST00000299345 SCN11AQ9UI33 1791 aa16.03■□□□□ 0.16
CDH8-201ENST00000299345 DDX19AQ9NUU7 478 aaKnown RBP16.03■□□□□ 0.16
CDH8-201ENST00000299345 APPP05067 770 aa16.02■□□□□ 0.16
CDH8-201ENST00000299345 TPM2P07951 284 aa16.02■□□□□ 0.16
CDH8-201ENST00000299345 ZFYP08048 801 aaPredicted RBP16.02■□□□□ 0.16
CDH8-201ENST00000299345 LEO1Q8WVC0 666 aaPredicted RBP16.02■□□□□ 0.16
CDH8-201ENST00000299345 ISCA1Q9BUE6 129 aa16.02■□□□□ 0.16
CDH8-201ENST00000299345 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.02■□□□□ 0.16
CDH8-201ENST00000299345 SOS2Q07890 1332 aaPredicted RBP16.02■□□□□ 0.16
CDH8-201ENST00000299345 LIG1P18858 919 aa16.02■□□□□ 0.15
CDH8-201ENST00000299345 ATP2B3Q16720 1220 aa16.02■□□□□ 0.15
CDH8-201ENST00000299345 HSP90AB3PQ58FF7 597 aa16.02■□□□□ 0.15
CDH8-201ENST00000299345 DRC7Q8IY82 874 aa16.02■□□□□ 0.15
CDH8-201ENST00000299345 TRMT112Q9UI30 125 aaKnown RBP16.02■□□□□ 0.15
CDH8-201ENST00000299345 GOLGA6L6A8MZA4 724 aa16.02■□□□□ 0.15
CDH8-201ENST00000299345 E7EWF7 191 aa16.02■□□□□ 0.15
CDH8-201ENST00000299345 CPLX1O14810 134 aa16.02■□□□□ 0.15
CDH8-201ENST00000299345 TRDNQ13061 729 aa16.02■□□□□ 0.15
CDH8-201ENST00000299345 MAST3O60307 1309 aa16.01■□□□□ 0.15
CDH8-201ENST00000299345 MRC1P22897 1456 aa16.01■□□□□ 0.15
CDH8-201ENST00000299345 KDM4AO75164 1064 aa16.01■□□□□ 0.15
CDH8-201ENST00000299345 PCCAP05165 728 aaPredicted RBP16.01■□□□□ 0.15
CDH8-201ENST00000299345 SCRN1Q12765 414 aa16.01■□□□□ 0.15
CDH8-201ENST00000299345 LLPHQ9BRT6 129 aaKnown RBP16.01■□□□□ 0.15
CDH8-201ENST00000299345 ELP1O95163 1332 aa16.01■□□□□ 0.15
CDH8-201ENST00000299345 ZNF335Q9H4Z2 1342 aaPredicted RBP16.01■□□□□ 0.15
CDH8-201ENST00000299345 ANKRD18BA2A2Z9 1011 aa16.01■□□□□ 0.15
CDH8-201ENST00000299345 PTPDC1A2A3K4 754 aa16.01■□□□□ 0.15
CDH8-201ENST00000299345 ADORA1P30542 326 aa16.01■□□□□ 0.15
CDH8-201ENST00000299345 GUCY1B3Q02153 619 aa16.01■□□□□ 0.15
CDH8-201ENST00000299345 PIGBQ92521 554 aa16.01■□□□□ 0.15
CDH8-201ENST00000299345 C5P01031 1676 aa16.01■□□□□ 0.15
CDH8-201ENST00000299345 ZNF500O60304 480 aaPredicted RBP16.01■□□□□ 0.15
CDH8-201ENST00000299345 TTLL5Q6EMB2 1281 aa16.01■□□□□ 0.15
CDH8-201ENST00000299345 SIPA1L3O60292 1781 aaPredicted RBP16■□□□□ 0.15
CDH8-201ENST00000299345 PALLDQ8WX93 1383 aa16■□□□□ 0.15
CDH8-201ENST00000299345 PFKFB2O60825 505 aa16■□□□□ 0.15
CDH8-201ENST00000299345 CCDC73Q6ZRK6 1079 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms