RNA–Protein interactions for RNA: ENST00000296786.7

UBLCP1-201, Transcript of ubiquitin like domain containing CTD phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBLCP1, Length 2,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBLCP1-201ENST00000296786 NEK1Q96PY6 1258 aa11.06□□□□□ -0.64
UBLCP1-201ENST00000296786 EYA2O00167 538 aa11.06□□□□□ -0.64
UBLCP1-201ENST00000296786 PDCP20941 246 aa11.06□□□□□ -0.64
UBLCP1-201ENST00000296786 MSNP26038 577 aaKnown RBP11.06□□□□□ -0.64
UBLCP1-201ENST00000296786 SLFNL1Q499Z3 407 aa11.06□□□□□ -0.64
UBLCP1-201ENST00000296786 FERMT3Q86UX7 667 aa11.06□□□□□ -0.64
UBLCP1-201ENST00000296786 NAP1L5Q96NT1 182 aaPredicted RBP11.06□□□□□ -0.64
UBLCP1-201ENST00000296786 TMOD3Q9NYL9 352 aa11.06□□□□□ -0.64
UBLCP1-201ENST00000296786 ZNF330Q9Y3S2 320 aaPredicted RBP11.06□□□□□ -0.64
UBLCP1-201ENST00000296786 NWD2Q9ULI1 1742 aa11.05□□□□□ -0.64
UBLCP1-201ENST00000296786 PDIA4P13667 645 aaKnown RBP11.05□□□□□ -0.64
UBLCP1-201ENST00000296786 AKAP11Q9UKA4 1901 aa11.05□□□□□ -0.64
UBLCP1-201ENST00000296786 A0A1B0GUL7 405 aa11.05□□□□□ -0.64
UBLCP1-201ENST00000296786 Q6ZUG5 572 aa11.05□□□□□ -0.64
UBLCP1-201ENST00000296786 ISCA1Q9BUE6 129 aa11.05□□□□□ -0.64
UBLCP1-201ENST00000296786 PUS3Q9BZE2 481 aaKnown RBP11.05□□□□□ -0.64
UBLCP1-201ENST00000296786 ATG3Q9NT62 314 aa11.05□□□□□ -0.64
UBLCP1-201ENST00000296786 CIAO1O76071 339 aa11.04□□□□□ -0.64
UBLCP1-201ENST00000296786 LETM1O95202 739 aaPredicted RBP11.04□□□□□ -0.64
UBLCP1-201ENST00000296786 GTF3C6Q969F1 213 aa11.04□□□□□ -0.64
UBLCP1-201ENST00000296786 HELLSQ9NRZ9 838 aa11.04□□□□□ -0.64
UBLCP1-201ENST00000296786 NOL7Q9UMY1 257 aaKnown RBP11.04□□□□□ -0.64
UBLCP1-201ENST00000296786 IFIT1P09914 478 aaKnown RBP11.04□□□□□ -0.64
UBLCP1-201ENST00000296786 KRT85P78386 507 aa11.04□□□□□ -0.64
UBLCP1-201ENST00000296786 TCIRG1Q13488 830 aa11.04□□□□□ -0.64
UBLCP1-201ENST00000296786 FAM173BQ6P4H8 233 aa11.04□□□□□ -0.64
UBLCP1-201ENST00000296786 STOX1Q6ZVD7 989 aa11.04□□□□□ -0.64
UBLCP1-201ENST00000296786 FAM184AQ8NB25 1140 aa11.04□□□□□ -0.64
UBLCP1-201ENST00000296786 ASAP1Q9ULH1 1129 aa11.04□□□□□ -0.64
UBLCP1-201ENST00000296786 HSP90B1P14625 803 aaKnown RBP11.03□□□□□ -0.64
UBLCP1-201ENST00000296786 CCDC57Q2TAC2 916 aa11.03□□□□□ -0.64
UBLCP1-201ENST00000296786 ZMYM1Q5SVZ6 1142 aa11.03□□□□□ -0.64
UBLCP1-201ENST00000296786 TTC6Q86TZ1 520 aa11.03□□□□□ -0.64
UBLCP1-201ENST00000296786 LRRC2Q9BYS8 371 aa11.03□□□□□ -0.64
UBLCP1-201ENST00000296786 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.03□□□□□ -0.64
UBLCP1-201ENST00000296786 WNK3Q9BYP7 1800 aa11.03□□□□□ -0.64
UBLCP1-201ENST00000296786 JAK2O60674 1132 aa11.03□□□□□ -0.64
UBLCP1-201ENST00000296786 DNAJC10Q8IXB1 793 aa11.03□□□□□ -0.64
UBLCP1-201ENST00000296786 PIGBQ92521 554 aa11.03□□□□□ -0.64
UBLCP1-201ENST00000296786 DSCC1Q9BVC3 393 aa11.03□□□□□ -0.64
UBLCP1-201ENST00000296786 DDX60Q8IY21 1712 aaKnown RBP11.02□□□□□ -0.64
UBLCP1-201ENST00000296786 HCLS1P14317 486 aaPredicted RBP11.02□□□□□ -0.65
UBLCP1-201ENST00000296786 KIF6Q6ZMV9 814 aa11.02□□□□□ -0.65
UBLCP1-201ENST00000296786 TICAM2Q86XR7 235 aa11.02□□□□□ -0.65
UBLCP1-201ENST00000296786 BRF1Q92994 677 aa11.02□□□□□ -0.65
UBLCP1-201ENST00000296786 FAM89AQ96GI7 184 aa11.02□□□□□ -0.65
UBLCP1-201ENST00000296786 CCDC85AQ96PX6 553 aaPredicted RBP11.02□□□□□ -0.65
UBLCP1-201ENST00000296786 CEP126Q9P2H0 1117 aa11.02□□□□□ -0.65
UBLCP1-201ENST00000296786 MAST3O60307 1309 aa11.02□□□□□ -0.65
UBLCP1-201ENST00000296786 ELP1O95163 1332 aa11.02□□□□□ -0.65
UBLCP1-201ENST00000296786 HSPD1P10809 573 aaKnown RBP11.02□□□□□ -0.65
UBLCP1-201ENST00000296786 FGD1P98174 961 aa11.02□□□□□ -0.65
UBLCP1-201ENST00000296786 GIMAP6Q6P9H5 292 aa11.02□□□□□ -0.65
UBLCP1-201ENST00000296786 VSIG10Q8N0Z9 540 aa11.02□□□□□ -0.65
UBLCP1-201ENST00000296786 CCDC39Q9UFE4 941 aa11.02□□□□□ -0.65
UBLCP1-201ENST00000296786 LRP6O75581 1613 aa11.01□□□□□ -0.65
UBLCP1-201ENST00000296786 PLCH1Q4KWH8 1693 aa11.01□□□□□ -0.65
UBLCP1-201ENST00000296786 A0A0G2JLW4 131 aa11.01□□□□□ -0.65
UBLCP1-201ENST00000296786 RNF113AO15541 343 aaKnown RBP11.01□□□□□ -0.65
UBLCP1-201ENST00000296786 PCCAP05165 728 aaPredicted RBP11.01□□□□□ -0.65
UBLCP1-201ENST00000296786 HMGB1P09429 215 aaKnown RBP11.01□□□□□ -0.65
UBLCP1-201ENST00000296786 SCRN1Q12765 414 aa11.01□□□□□ -0.65
UBLCP1-201ENST00000296786 TRIM28Q13263 835 aaKnown RBP11.01□□□□□ -0.65
UBLCP1-201ENST00000296786 UVSSAQ2YD98 709 aa11.01□□□□□ -0.65
UBLCP1-201ENST00000296786 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.01□□□□□ -0.65
UBLCP1-201ENST00000296786 FUCA2Q9BTY2 467 aa11.01□□□□□ -0.65
UBLCP1-201ENST00000296786 TEX13AQ9BXU3 409 aaPredicted RBP11.01□□□□□ -0.65
UBLCP1-201ENST00000296786 ZKSCAN5Q9Y2L8 839 aa11.01□□□□□ -0.65
UBLCP1-201ENST00000296786 COL14A1Q05707 1796 aaKnown RBP11.01□□□□□ -0.65
UBLCP1-201ENST00000296786 ADORA1P30542 326 aa11.01□□□□□ -0.65
UBLCP1-201ENST00000296786 FKBP4Q02790 459 aaKnown RBP eCLIP11.01□□□□□ -0.65
UBLCP1-201ENST00000296786 DHX32Q7L7V1 743 aaKnown RBP11.01□□□□□ -0.65
UBLCP1-201ENST00000296786 BTG4Q9NY30 223 aa11.01□□□□□ -0.65
UBLCP1-201ENST00000296786 CHD4Q14839 1912 aa11□□□□□ -0.65
UBLCP1-201ENST00000296786 M0R2C6 588 aa11□□□□□ -0.65
UBLCP1-201ENST00000296786 CCDC158Q5M9N0 1113 aa11□□□□□ -0.65
UBLCP1-201ENST00000296786 TTC39AQ5SRH9 613 aa11□□□□□ -0.65
UBLCP1-201ENST00000296786 GORABQ5T7V8 394 aa11□□□□□ -0.65
UBLCP1-201ENST00000296786 ZBTB38Q8NAP3 1195 aaPredicted RBP11□□□□□ -0.65
UBLCP1-201ENST00000296786 DDX11Q96FC9 970 aa11□□□□□ -0.65
UBLCP1-201ENST00000296786 XAGE2Q96GT9 111 aa11□□□□□ -0.65
UBLCP1-201ENST00000296786 SCAND2PQ9GZW5 306 aaPredicted RBP11□□□□□ -0.65
UBLCP1-201ENST00000296786 USP25Q9UHP3 1055 aa11□□□□□ -0.65
UBLCP1-201ENST00000296786 FBXO3Q9UK99 471 aa11□□□□□ -0.65
UBLCP1-201ENST00000296786 AKAP2Q9Y2D5 859 aa11□□□□□ -0.65
UBLCP1-201ENST00000296786 DOT1LQ8TEK3 1739 aa11□□□□□ -0.65
UBLCP1-201ENST00000296786 E7EWF7 191 aa10.99□□□□□ -0.65
UBLCP1-201ENST00000296786 ZNF500O60304 480 aaPredicted RBP10.99□□□□□ -0.65
UBLCP1-201ENST00000296786 STARD3NLO95772 234 aa10.99□□□□□ -0.65
UBLCP1-201ENST00000296786 TAF7LQ5H9L4 462 aa10.99□□□□□ -0.65
UBLCP1-201ENST00000296786 SYNE4Q8N205 404 aa10.99□□□□□ -0.65
UBLCP1-201ENST00000296786 KLHL34Q8N239 644 aa10.99□□□□□ -0.65
UBLCP1-201ENST00000296786 SPATA32Q96LK8 384 aa10.99□□□□□ -0.65
UBLCP1-201ENST00000296786 PLA2G12BQ9BX93 195 aa10.99□□□□□ -0.65
UBLCP1-201ENST00000296786 PLSCR2Q9NRY7 297 aa10.99□□□□□ -0.65
UBLCP1-201ENST00000296786 TFIP11Q9UBB9 837 aaKnown RBP10.99□□□□□ -0.65
UBLCP1-201ENST00000296786 MAP3K15Q6ZN16 1313 aa10.99□□□□□ -0.65
UBLCP1-201ENST00000296786 RIC1Q4ADV7 1423 aa10.99□□□□□ -0.65
UBLCP1-201ENST00000296786 PFKFB2O60825 505 aa10.99□□□□□ -0.65
UBLCP1-201ENST00000296786 PTMAP06454 111 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms