RNA–Protein interactions for RNA: ENST00000295767.9

CHCHD4-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

TSL 2 BASIC

Gene CHCHD4, Length 1,603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-201ENST00000295767 RIPOR2Q9Y4F9 1068 aa34.41■■■■□ 3.1
CHCHD4-201ENST00000295767 CIAO1O76071 339 aa34.4■■■■□ 3.1
CHCHD4-201ENST00000295767 DALRD3Q5D0E6 543 aaKnown RBP34.4■■■■□ 3.1
CHCHD4-201ENST00000295767 DCTPP1Q9H773 170 aa34.39■■■■□ 3.1
CHCHD4-201ENST00000295767 ATP6V0A2Q9Y487 856 aa34.39■■■■□ 3.1
CHCHD4-201ENST00000295767 G3BP1Q13283 466 aaKnown RBP eCLIP34.38■■■■□ 3.09
CHCHD4-201ENST00000295767 ZNF219Q9P2Y4 722 aaPredicted RBP34.38■■■■□ 3.09
CHCHD4-201ENST00000295767 MINPP1Q9UNW1 487 aa34.38■■■■□ 3.09
CHCHD4-201ENST00000295767 OLFM4Q6UX06 510 aa34.37■■■■□ 3.09
CHCHD4-201ENST00000295767 SP8Q8IXZ3 490 aa34.37■■■■□ 3.09
CHCHD4-201ENST00000295767 C7orf43Q8WVR3 580 aa34.37■■■■□ 3.09
CHCHD4-201ENST00000295767 LTBP1Q14766 1721 aa34.37■■■■□ 3.09
CHCHD4-201ENST00000295767 PPP4R2Q9NY27 417 aa34.37■■■■□ 3.09
CHCHD4-201ENST00000295767 IL15P40933 162 aaPredicted RBP34.36■■■■□ 3.09
CHCHD4-201ENST00000295767 OS9Q13438 667 aaPredicted RBP34.36■■■■□ 3.09
CHCHD4-201ENST00000295767 BCS1LQ9Y276 419 aa34.36■■■■□ 3.09
CHCHD4-201ENST00000295767 CHRNDQ07001 517 aa34.35■■■■□ 3.09
CHCHD4-201ENST00000295767 C21orf2O43822 256 aa34.34■■■■□ 3.09
CHCHD4-201ENST00000295767 HSP90AB4PQ58FF6 505 aa34.34■■■■□ 3.09
CHCHD4-201ENST00000295767 CCDC136Q96JN2 1154 aa34.34■■■■□ 3.09
CHCHD4-201ENST00000295767 MROH5Q6ZUA9 1318 aa34.34■■■■□ 3.09
CHCHD4-201ENST00000295767 SASH1O94885 1247 aa34.33■■■■□ 3.09
CHCHD4-201ENST00000295767 METTL24Q5JXM2 366 aa34.33■■■■□ 3.09
CHCHD4-201ENST00000295767 HELBQ8NG08 1087 aaPredicted RBP34.33■■■■□ 3.09
CHCHD4-201ENST00000295767 APBB1O00213 710 aa34.32■■■■□ 3.08
CHCHD4-201ENST00000295767 GOLGB1Q14789 3259 aaKnown RBP34.32■■■■□ 3.08
CHCHD4-201ENST00000295767 SNED1Q8TER0 1413 aa34.31■■■■□ 3.08
CHCHD4-201ENST00000295767 FER1L6Q2WGJ9 1857 aa34.31■■■■□ 3.08
CHCHD4-201ENST00000295767 B4GALNT3Q6L9W6 998 aa34.31■■■■□ 3.08
CHCHD4-201ENST00000295767 TAF5LO75529 589 aa34.3■■■■□ 3.08
CHCHD4-201ENST00000295767 VGLL2Q8N8G2 317 aa34.3■■■■□ 3.08
CHCHD4-201ENST00000295767 GCC1Q96CN9 775 aa34.3■■■■□ 3.08
CHCHD4-201ENST00000295767 TMX4Q9H1E5 349 aaPredicted RBP34.3■■■■□ 3.08
CHCHD4-201ENST00000295767 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP34.3■■■■□ 3.08
CHCHD4-201ENST00000295767 RAB11FIP3O75154 756 aa34.3■■■■□ 3.08
CHCHD4-201ENST00000295767 GPSM2P81274 684 aa34.3■■■■□ 3.08
CHCHD4-201ENST00000295767 TFCP2Q12800 502 aa34.3■■■■□ 3.08
CHCHD4-201ENST00000295767 ERC1Q8IUD2 1116 aa34.3■■■■□ 3.08
CHCHD4-201ENST00000295767 SMC5Q8IY18 1101 aa34.3■■■■□ 3.08
CHCHD4-201ENST00000295767 DUOX1Q9NRD9 1551 aa34.29■■■■□ 3.08
CHCHD4-201ENST00000295767 ANKRD2Q9GZV1 360 aa34.29■■■■□ 3.08
CHCHD4-201ENST00000295767 CEP126Q9P2H0 1117 aa34.29■■■■□ 3.08
CHCHD4-201ENST00000295767 GTF3C3Q9Y5Q9 886 aa34.29■■■■□ 3.08
CHCHD4-201ENST00000295767 CC2D2BQ6DHV5 1058 aa34.28■■■■□ 3.08
CHCHD4-201ENST00000295767 RHPN1Q8TCX5 695 aa34.28■■■■□ 3.08
CHCHD4-201ENST00000295767 ANKIB1Q9P2G1 1089 aa34.28■■■■□ 3.08
CHCHD4-201ENST00000295767 NSFL1CQ9UNZ2 370 aaKnown RBP34.28■■■■□ 3.08
CHCHD4-201ENST00000295767 XDHP47989 1333 aa34.28■■■■□ 3.08
CHCHD4-201ENST00000295767 CCDC93Q567U6 631 aa34.27■■■■□ 3.08
CHCHD4-201ENST00000295767 KDM2BQ8NHM5 1336 aa34.27■■■■□ 3.08
CHCHD4-201ENST00000295767 PDE8BO95263 885 aa34.26■■■■□ 3.08
CHCHD4-201ENST00000295767 KIF1BPQ96EK5 621 aa34.26■■■■□ 3.08
CHCHD4-201ENST00000295767 MPNDQ8N594 471 aa34.26■■■■□ 3.07
CHCHD4-201ENST00000295767 PODXL2Q9NZ53 605 aa34.26■■■■□ 3.07
CHCHD4-201ENST00000295767 ARAP2Q8WZ64 1704 aa34.25■■■■□ 3.07
CHCHD4-201ENST00000295767 SOGA3Q5TF21 947 aa34.25■■■■□ 3.07
CHCHD4-201ENST00000295767 SNAP23O00161 211 aa34.24■■■■□ 3.07
CHCHD4-201ENST00000295767 PELP1Q8IZL8 1130 aaKnown RBP34.24■■■■□ 3.07
CHCHD4-201ENST00000295767 LRRCC1Q9C099 1032 aa34.24■■■■□ 3.07
CHCHD4-201ENST00000295767 WTIPA6NIX2 430 aaPredicted RBP34.23■■■■□ 3.07
CHCHD4-201ENST00000295767 DPP8Q6V1X1 898 aaPredicted RBP34.23■■■■□ 3.07
CHCHD4-201ENST00000295767 IL1RAPL2Q9NP60 686 aa34.23■■■■□ 3.07
CHCHD4-201ENST00000295767 YBX3P16989 372 aaKnown RBP eCLIP34.22■■■■□ 3.071e-6■■■■□ 21
CHCHD4-201ENST00000295767 ZNF609O15014 1411 aa34.22■■■■□ 3.07
CHCHD4-201ENST00000295767 SMARCA5O60264 1052 aaPredicted RBP34.22■■■■□ 3.07
CHCHD4-201ENST00000295767 RTKN2Q8IZC4 609 aa34.22■■■■□ 3.07
CHCHD4-201ENST00000295767 GGA1Q9UJY5 639 aa34.22■■■■□ 3.07
CHCHD4-201ENST00000295767 UFL1O94874 794 aa34.21■■■■□ 3.07
CHCHD4-201ENST00000295767 GRIPAP1Q4V328 841 aa34.21■■■■□ 3.07
CHCHD4-201ENST00000295767 CENPQQ7L2Z9 268 aaPredicted RBP34.21■■■■□ 3.07
CHCHD4-201ENST00000295767 POLLQ9UGP5 575 aa34.21■■■■□ 3.07
CHCHD4-201ENST00000295767 ATP2B4P23634 1241 aa34.2■■■■□ 3.07
CHCHD4-201ENST00000295767 PUM3Q15397 648 aaKnown RBP34.2■■■■□ 3.07
CHCHD4-201ENST00000295767 TBC1D16Q8TBP0 767 aa34.2■■■■□ 3.07
CHCHD4-201ENST00000295767 LEMD3Q9Y2U8 911 aa34.2■■■■□ 3.07
CHCHD4-201ENST00000295767 ZNF804BA4D1E1 1349 aa34.19■■■■□ 3.06
CHCHD4-201ENST00000295767 FGFR2P21802 821 aa34.19■■■■□ 3.06
CHCHD4-201ENST00000295767 KCNJ4P48050 445 aa34.19■■■■□ 3.06
CHCHD4-201ENST00000295767 ATP2B3Q16720 1220 aa34.19■■■■□ 3.06
CHCHD4-201ENST00000295767 ANKRD45Q5TZF3 282 aa34.19■■■■□ 3.06
CHCHD4-201ENST00000295767 UBE4AQ14139 1066 aa34.19■■■■□ 3.06
CHCHD4-201ENST00000295767 TNNI3KQ59H18 835 aa34.19■■■■□ 3.06
CHCHD4-201ENST00000295767 BCL11AQ9H165 835 aa34.19■■■■□ 3.06
CHCHD4-201ENST00000295767 GPR108Q9NPR9 543 aa34.19■■■■□ 3.06
CHCHD4-201ENST00000295767 AKAP2Q9Y2D5 859 aa34.19■■■■□ 3.06
CHCHD4-201ENST00000295767 FPGT-TNNI3KV9GXZ4 949 aa34.19■■■■□ 3.06
CHCHD4-201ENST00000295767 CCDC88AQ3V6T2 1871 aa34.18■■■■□ 3.06
CHCHD4-201ENST00000295767 RTFDC1Q9BY42 306 aaPredicted RBP34.18■■■■□ 3.06
CHCHD4-201ENST00000295767 C6orf229H3BNL8 230 aa34.17■■■■□ 3.06
CHCHD4-201ENST00000295767 GPR101Q96P66 508 aaPredicted RBP34.17■■■■□ 3.06
CHCHD4-201ENST00000295767 A0A1B0GUL7 405 aa34.16■■■■□ 3.06
CHCHD4-201ENST00000295767 CLASRPQ8N2M8 674 aaKnown RBP34.16■■■■□ 3.06
CHCHD4-201ENST00000295767 LPIN2Q92539 896 aa34.16■■■■□ 3.06
CHCHD4-201ENST00000295767 EAF2Q96CJ1 260 aaPredicted RBP34.16■■■■□ 3.06
CHCHD4-201ENST00000295767 PSMD1Q99460 953 aa34.16■■■■□ 3.06
CHCHD4-201ENST00000295767 TIMM10P62072 90 aa34.15■■■■□ 3.06
CHCHD4-201ENST00000295767 NFKBIEO00221 500 aa34.15■■■■□ 3.06
CHCHD4-201ENST00000295767 KLRK1P26718 216 aa34.15■■■■□ 3.06
CHCHD4-201ENST00000295767 FKBP4Q02790 459 aaKnown RBP eCLIP34.15■■■■□ 3.06
CHCHD4-201ENST00000295767 NUCB1Q02818 461 aa34.15■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 791 ms