RNA–Protein interactions for RNA: ENST00000295057.3

LRRTM1-201, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRTM1, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-201ENST00000295057 CWC25Q9NXE8 425 aaPredicted RBP18.12■□□□□ 0.49
LRRTM1-201ENST00000295057 LARGE1O95461 756 aa18.11■□□□□ 0.49
LRRTM1-201ENST00000295057 NAA30Q147X3 362 aaPredicted RBP18.11■□□□□ 0.49
LRRTM1-201ENST00000295057 H7C1W4 665 aa18.11■□□□□ 0.49
LRRTM1-201ENST00000295057 FOXO4P98177 505 aa18.11■□□□□ 0.49
LRRTM1-201ENST00000295057 RASEFQ8IZ41 740 aa18.11■□□□□ 0.49
LRRTM1-201ENST00000295057 C8orf37Q96NL8 207 aa18.11■□□□□ 0.49
LRRTM1-201ENST00000295057 SNX14Q9Y5W7 946 aa18.11■□□□□ 0.49
LRRTM1-201ENST00000295057 PLCH1Q4KWH8 1693 aa18.1■□□□□ 0.49
LRRTM1-201ENST00000295057 LRMPQ12912 555 aa18.1■□□□□ 0.49
LRRTM1-201ENST00000295057 HLFQ16534 295 aa18.1■□□□□ 0.49
LRRTM1-201ENST00000295057 SYNE4Q8N205 404 aa18.1■□□□□ 0.49
LRRTM1-201ENST00000295057 TTC14Q96N46 770 aa18.1■□□□□ 0.49
LRRTM1-201ENST00000295057 CCDC85AQ96PX6 553 aaPredicted RBP18.1■□□□□ 0.49
LRRTM1-201ENST00000295057 AFDNP55196 1824 aaKnown RBP18.1■□□□□ 0.49
LRRTM1-201ENST00000295057 ERC1Q8IUD2 1116 aa18.1■□□□□ 0.49
LRRTM1-201ENST00000295057 C16orf45Q96MC5 204 aaPredicted RBP18.1■□□□□ 0.49
LRRTM1-201ENST00000295057 ZBTB1Q9Y2K1 713 aa18.1■□□□□ 0.49
LRRTM1-201ENST00000295057 AOX1Q06278 1338 aa18.1■□□□□ 0.49
LRRTM1-201ENST00000295057 ITGB4P16144 1822 aa18.1■□□□□ 0.49
LRRTM1-201ENST00000295057 STARD3NLO95772 234 aa18.09■□□□□ 0.49
LRRTM1-201ENST00000295057 RABL6Q3YEC7 729 aaPredicted RBP18.09■□□□□ 0.49
LRRTM1-201ENST00000295057 ECHDC1Q9NTX5 307 aa18.09■□□□□ 0.49
LRRTM1-201ENST00000295057 CGNQ9P2M7 1197 aaKnown RBP18.09■□□□□ 0.49
LRRTM1-201ENST00000295057 SMC3Q9UQE7 1217 aa18.09■□□□□ 0.49
LRRTM1-201ENST00000295057 CYP19A1P11511 503 aaPredicted RBP18.09■□□□□ 0.49
LRRTM1-201ENST00000295057 GPTP24298 496 aa18.09■□□□□ 0.49
LRRTM1-201ENST00000295057 TFCP2Q12800 502 aa18.09■□□□□ 0.49
LRRTM1-201ENST00000295057 ZNF594Q96JF6 807 aaPredicted RBP18.09■□□□□ 0.49
LRRTM1-201ENST00000295057 SPATA31A5Q5VU36 1347 aa18.09■□□□□ 0.49
LRRTM1-201ENST00000295057 SPATA31A7Q8IWB4 1347 aa18.09■□□□□ 0.49
LRRTM1-201ENST00000295057 NRBP1Q9UHY1 535 aa18.08■□□□□ 0.49
LRRTM1-201ENST00000295057 JCADQ9P266 1359 aa18.08■□□□□ 0.48
LRRTM1-201ENST00000295057 FAM98CQ17RN3 349 aaKnown RBP18.08■□□□□ 0.48
LRRTM1-201ENST00000295057 CWC27Q6UX04 472 aaKnown RBP18.08■□□□□ 0.48
LRRTM1-201ENST00000295057 LUZP1Q86V48 1076 aa18.08■□□□□ 0.48
LRRTM1-201ENST00000295057 FAM89AQ96GI7 184 aa18.08■□□□□ 0.48
LRRTM1-201ENST00000295057 NDUFB9Q9Y6M9 179 aa18.08■□□□□ 0.48
LRRTM1-201ENST00000295057 KCNQ2O43526 872 aa18.07■□□□□ 0.48
LRRTM1-201ENST00000295057 CAMK4Q16566 473 aa18.07■□□□□ 0.48
LRRTM1-201ENST00000295057 ZNF771Q7L3S4 317 aaPredicted RBP18.07■□□□□ 0.48
LRRTM1-201ENST00000295057 BOLA2Q9H3K6 86 aa18.07■□□□□ 0.48
LRRTM1-201ENST00000295057 COPRSQ9NQ92 184 aa18.07■□□□□ 0.48
LRRTM1-201ENST00000295057 GOLGA6L6A8MZA4 724 aa18.07■□□□□ 0.48
LRRTM1-201ENST00000295057 GLRX3O76003 335 aaKnown RBP18.07■□□□□ 0.48
LRRTM1-201ENST00000295057 TPM3P06753 285 aa18.07■□□□□ 0.48
LRRTM1-201ENST00000295057 TCIRG1Q13488 830 aa18.07■□□□□ 0.48
LRRTM1-201ENST00000295057 CCDC186Q7Z3E2 898 aa18.07■□□□□ 0.48
LRRTM1-201ENST00000295057 CCDC83Q8IWF9 413 aa18.07■□□□□ 0.48
LRRTM1-201ENST00000295057 FEZ1Q99689 392 aa18.07■□□□□ 0.48
LRRTM1-201ENST00000295057 CTNNA3Q9UI47 895 aa18.07■□□□□ 0.48
LRRTM1-201ENST00000295057 LIMCH1Q9UPQ0 1083 aa18.07■□□□□ 0.48
LRRTM1-201ENST00000295057 TBC1D2BQ9UPU7 963 aa18.07■□□□□ 0.48
LRRTM1-201ENST00000295057 CCDC192P0DO97 292 aa18.06■□□□□ 0.48
LRRTM1-201ENST00000295057 GJB2P29033 226 aa18.06■□□□□ 0.48
LRRTM1-201ENST00000295057 CCDC191Q8NCU4 936 aa18.06■□□□□ 0.48
LRRTM1-201ENST00000295057 EDC3Q96F86 508 aaKnown RBP18.06■□□□□ 0.48
LRRTM1-201ENST00000295057 OGFRQ9NZT2 677 aa18.06■□□□□ 0.48
LRRTM1-201ENST00000295057 MTMR6Q9Y217 621 aa18.06■□□□□ 0.48
LRRTM1-201ENST00000295057 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.06■□□□□ 0.48
LRRTM1-201ENST00000295057 USP42Q9H9J4 1324 aaKnown RBP18.06■□□□□ 0.48
LRRTM1-201ENST00000295057 CNTROBQ8N137 903 aa18.06■□□□□ 0.48
LRRTM1-201ENST00000295057 NGLY1Q96IV0 654 aa18.06■□□□□ 0.48
LRRTM1-201ENST00000295057 ISCA1Q9BUE6 129 aa18.06■□□□□ 0.48
LRRTM1-201ENST00000295057 TEX13AQ9BXU3 409 aaPredicted RBP18.06■□□□□ 0.48
LRRTM1-201ENST00000295057 TTC41PQ6P2S7 1318 aa18.06■□□□□ 0.48
LRRTM1-201ENST00000295057 RAD50Q92878 1312 aa18.06■□□□□ 0.48
LRRTM1-201ENST00000295057 KIF6Q6ZMV9 814 aa18.05■□□□□ 0.48
LRRTM1-201ENST00000295057 VGLL3A8MV65 326 aa18.05■□□□□ 0.48
LRRTM1-201ENST00000295057 ATP6V1DQ9Y5K8 247 aa18.05■□□□□ 0.48
LRRTM1-201ENST00000295057 MRVI1Q9Y6F6 885 aa18.05■□□□□ 0.48
LRRTM1-201ENST00000295057 NUP188Q5SRE5 1749 aa18.05■□□□□ 0.48
LRRTM1-201ENST00000295057 VPS37CA5D8V6 355 aaPredicted RBP18.04■□□□□ 0.48
LRRTM1-201ENST00000295057 FAM200AQ8TCP9 573 aa18.04■□□□□ 0.48
LRRTM1-201ENST00000295057 DBNLQ9UJU6 430 aaKnown RBP18.04■□□□□ 0.48
LRRTM1-201ENST00000295057 NRAPQ86VF7 1730 aa18.04■□□□□ 0.48
LRRTM1-201ENST00000295057 SGSM2O43147 1006 aa18.04■□□□□ 0.48
LRRTM1-201ENST00000295057 CASTP20810 708 aaKnown RBP18.04■□□□□ 0.48
LRRTM1-201ENST00000295057 KCNQ4P56696 695 aa18.04■□□□□ 0.48
LRRTM1-201ENST00000295057 LRRC24Q50LG9 513 aa18.04■□□□□ 0.48
LRRTM1-201ENST00000295057 LSG1Q9H089 658 aaKnown RBP18.04■□□□□ 0.48
LRRTM1-201ENST00000295057 THRAP3Q9Y2W1 955 aaKnown RBP18.04■□□□□ 0.48
LRRTM1-201ENST00000295057 LIG1P18858 919 aa18.03■□□□□ 0.48
LRRTM1-201ENST00000295057 FAM173BQ6P4H8 233 aa18.03■□□□□ 0.48
LRRTM1-201ENST00000295057 PTF1AQ7RTS3 328 aa18.03■□□□□ 0.48
LRRTM1-201ENST00000295057 CKAP2LQ8IYA6 745 aa18.03■□□□□ 0.48
LRRTM1-201ENST00000295057 PUS3Q9BZE2 481 aaKnown RBP18.03■□□□□ 0.48
LRRTM1-201ENST00000295057 SLIT2O94813 1529 aa18.03■□□□□ 0.48
LRRTM1-201ENST00000295057 TNNT1P13805 278 aa18.03■□□□□ 0.48
LRRTM1-201ENST00000295057 TNNI3KQ59H18 835 aa18.03■□□□□ 0.48
LRRTM1-201ENST00000295057 DRC7Q8IY82 874 aa18.03■□□□□ 0.48
LRRTM1-201ENST00000295057 GPATCH3Q96I76 525 aa18.03■□□□□ 0.48
LRRTM1-201ENST00000295057 FPGT-TNNI3KV9GXZ4 949 aa18.03■□□□□ 0.48
LRRTM1-201ENST00000295057 SPATA31A6Q5VVP1 1343 aa18.02■□□□□ 0.48
LRRTM1-201ENST00000295057 MAP3K15Q6ZN16 1313 aa18.02■□□□□ 0.48
LRRTM1-201ENST00000295057 ZBTB22O15209 634 aa18.02■□□□□ 0.48
LRRTM1-201ENST00000295057 CHGBP05060 677 aa18.02■□□□□ 0.48
LRRTM1-201ENST00000295057 TYRO3Q06418 890 aa18.02■□□□□ 0.48
LRRTM1-201ENST00000295057 FAM182BQ5T319 152 aa18.02■□□□□ 0.48
LRRTM1-201ENST00000295057 DBNDD2Q9BQY9 259 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms