RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 CC2D2BQ6DHV5 1058 aa12.5□□□□□ -0.41
CCDC58-201ENST00000291458 DPP8Q6V1X1 898 aaPredicted RBP12.5□□□□□ -0.41
CCDC58-201ENST00000291458 NIM1KQ8IY84 436 aa12.5□□□□□ -0.41
CCDC58-201ENST00000291458 ZBTB38Q8NAP3 1195 aaPredicted RBP12.5□□□□□ -0.41
CCDC58-201ENST00000291458 PSMD1Q99460 953 aa12.5□□□□□ -0.41
CCDC58-201ENST00000291458 CHMP4AQ9BY43 222 aa12.5□□□□□ -0.41
CCDC58-201ENST00000291458 SEC31BQ9NQW1 1179 aa12.5□□□□□ -0.41
CCDC58-201ENST00000291458 SCN4AP35499 1836 aa12.49□□□□□ -0.41
CCDC58-201ENST00000291458 POTECB2RU33 542 aa12.49□□□□□ -0.41
CCDC58-201ENST00000291458 F6X3S4 739 aa12.49□□□□□ -0.41
CCDC58-201ENST00000291458 VAMP4O75379 141 aa12.49□□□□□ -0.41
CCDC58-201ENST00000291458 PCCAP05165 728 aaPredicted RBP12.49□□□□□ -0.41
CCDC58-201ENST00000291458 IGKV5-2P06315 115 aa12.49□□□□□ -0.41
CCDC58-201ENST00000291458 POTEIP0CG38 1075 aa12.49□□□□□ -0.41
CCDC58-201ENST00000291458 POTEJP0CG39 1038 aa12.49□□□□□ -0.41
CCDC58-201ENST00000291458 UBE3BQ7Z3V4 1068 aa12.49□□□□□ -0.41
CCDC58-201ENST00000291458 MPNDQ8N594 471 aa12.49□□□□□ -0.41
CCDC58-201ENST00000291458 CCDC191Q8NCU4 936 aa12.49□□□□□ -0.41
CCDC58-201ENST00000291458 GPR101Q96P66 508 aaPredicted RBP12.49□□□□□ -0.41
CCDC58-201ENST00000291458 LTBP1Q14766 1721 aa12.48□□□□□ -0.41
CCDC58-201ENST00000291458 NEURL1BA8MQ27 555 aa12.48□□□□□ -0.41
CCDC58-201ENST00000291458 EIF6P56537 245 aaKnown RBP12.48□□□□□ -0.41
CCDC58-201ENST00000291458 SMC1BQ8NDV3 1235 aa12.48□□□□□ -0.41
CCDC58-201ENST00000291458 DNAAF4Q8WXU2 420 aa12.48□□□□□ -0.41
CCDC58-201ENST00000291458 ZNF521Q96K83 1311 aa12.47□□□□□ -0.41
CCDC58-201ENST00000291458 STK25O00506 426 aa12.47□□□□□ -0.41
CCDC58-201ENST00000291458 RIMBP2O15034 1052 aa12.47□□□□□ -0.41
CCDC58-201ENST00000291458 PDE8AO60658 829 aa12.47□□□□□ -0.41
CCDC58-201ENST00000291458 BBOX1O75936 387 aa12.47□□□□□ -0.41
CCDC58-201ENST00000291458 ATN1P54259 1190 aaPredicted RBP12.47□□□□□ -0.41
CCDC58-201ENST00000291458 TRIM28Q13263 835 aaKnown RBP12.47□□□□□ -0.41
CCDC58-201ENST00000291458 SF3B3Q15393 1217 aaKnown RBP12.47□□□□□ -0.41
CCDC58-201ENST00000291458 SP8Q8IXZ3 490 aa12.47□□□□□ -0.41
CCDC58-201ENST00000291458 HS6ST3Q8IZP7 471 aa12.47□□□□□ -0.41
CCDC58-201ENST00000291458 NSFL1CQ9UNZ2 370 aaKnown RBP12.47□□□□□ -0.41
CCDC58-201ENST00000291458 C6orf229H3BNL8 230 aa12.46□□□□□ -0.41
CCDC58-201ENST00000291458 FZD9O00144 591 aa12.46□□□□□ -0.41
CCDC58-201ENST00000291458 CTSWP56202 376 aa12.46□□□□□ -0.41
CCDC58-201ENST00000291458 GPSM2P81274 684 aa12.46□□□□□ -0.41
CCDC58-201ENST00000291458 CCDC152Q4G0S7 254 aa12.46□□□□□ -0.41
CCDC58-201ENST00000291458 SUPT20HQ8NEM7 779 aa12.46□□□□□ -0.41
CCDC58-201ENST00000291458 BCL2L13Q9BXK5 485 aa12.46□□□□□ -0.41
CCDC58-201ENST00000291458 CDHR2Q9BYE9 1310 aa12.45□□□□□ -0.42
CCDC58-201ENST00000291458 IQCA1LA6NCM1 817 aa12.45□□□□□ -0.42
CCDC58-201ENST00000291458 APLP1P51693 650 aa12.45□□□□□ -0.42
CCDC58-201ENST00000291458 SLC4A10Q6U841 1118 aa12.45□□□□□ -0.42
CCDC58-201ENST00000291458 CDCA7LQ96GN5 454 aa12.45□□□□□ -0.42
CCDC58-201ENST00000291458 HACL1Q9UJ83 578 aa12.45□□□□□ -0.42
CCDC58-201ENST00000291458 STK24Q9Y6E0 443 aa12.45□□□□□ -0.42
CCDC58-201ENST00000291458 CCER2I3L3R5 266 aa12.44□□□□□ -0.42
CCDC58-201ENST00000291458 RAD17O75943 681 aa12.44□□□□□ -0.42
CCDC58-201ENST00000291458 UFL1O94874 794 aa12.44□□□□□ -0.42
CCDC58-201ENST00000291458 HSP90B1P14625 803 aaKnown RBP12.44□□□□□ -0.42
CCDC58-201ENST00000291458 LMOD1P29536 600 aaPredicted RBP12.44□□□□□ -0.42
CCDC58-201ENST00000291458 EPHX2P34913 555 aa12.44□□□□□ -0.42
CCDC58-201ENST00000291458 RPS8P62241 208 aaKnown RBP12.44□□□□□ -0.42
CCDC58-201ENST00000291458 FSTL1Q12841 308 aa12.44□□□□□ -0.42
CCDC58-201ENST00000291458 GCKRQ14397 625 aa12.44□□□□□ -0.42
CCDC58-201ENST00000291458 GRIPAP1Q4V328 841 aa12.44□□□□□ -0.42
CCDC58-201ENST00000291458 DIEXFQ68CQ4 756 aaKnown RBP12.44□□□□□ -0.42
CCDC58-201ENST00000291458 TMC4Q7Z404 712 aa12.44□□□□□ -0.42
CCDC58-201ENST00000291458 ANKRD18AQ8IVF6 992 aa12.44□□□□□ -0.42
CCDC58-201ENST00000291458 L3MBTL3Q96JM7 780 aaPredicted RBP12.44□□□□□ -0.42
CCDC58-201ENST00000291458 TAF1DQ9H5J8 278 aaPredicted RBP12.44□□□□□ -0.42
CCDC58-201ENST00000291458 GREM2Q9H772 168 aa12.44□□□□□ -0.42
CCDC58-201ENST00000291458 DBNDD1Q9H9R9 158 aa12.44□□□□□ -0.42
CCDC58-201ENST00000291458 ANKIB1Q9P2G1 1089 aa12.44□□□□□ -0.42
CCDC58-201ENST00000291458 CHMP3Q9Y3E7 222 aa12.44□□□□□ -0.42
CCDC58-201ENST00000291458 E9PSI1 815 aa12.43□□□□□ -0.42
CCDC58-201ENST00000291458 KIAA2012Q0VF49 1180 aa12.43□□□□□ -0.42
CCDC58-201ENST00000291458 DOK7Q18PE1 504 aa12.43□□□□□ -0.42
CCDC58-201ENST00000291458 FAM161AQ3B820 660 aa12.43□□□□□ -0.42
CCDC58-201ENST00000291458 GPC2Q8N158 579 aa12.43□□□□□ -0.42
CCDC58-201ENST00000291458 RTFDC1Q9BY42 306 aaPredicted RBP12.43□□□□□ -0.42
CCDC58-201ENST00000291458 SCN9AQ15858 1988 aa12.42□□□□□ -0.42
CCDC58-201ENST00000291458 EPS15P42566 896 aa12.42□□□□□ -0.42
CCDC58-201ENST00000291458 WASHC4Q2M389 1173 aa12.42□□□□□ -0.42
CCDC58-201ENST00000291458 LINS1Q8NG48 757 aa12.42□□□□□ -0.42
CCDC58-201ENST00000291458 POLLQ9UGP5 575 aa12.42□□□□□ -0.42
CCDC58-201ENST00000291458 ZNRF3Q9ULT6 936 aa12.42□□□□□ -0.42
CCDC58-201ENST00000291458 ADAMTSL1Q8N6G6 1762 aa12.42□□□□□ -0.42
CCDC58-201ENST00000291458 A0A1B0GUL6 1792 aa12.41□□□□□ -0.42
CCDC58-201ENST00000291458 YDJCA8MPS7 323 aa12.41□□□□□ -0.42
CCDC58-201ENST00000291458 G3V3G9 751 aa12.41□□□□□ -0.42
CCDC58-201ENST00000291458 ECE2O60344 883 aa12.41□□□□□ -0.42
CCDC58-201ENST00000291458 GMPSP49915 693 aaPredicted RBP12.41□□□□□ -0.42
CCDC58-201ENST00000291458 SCNN1DP51172 638 aa12.41□□□□□ -0.42
CCDC58-201ENST00000291458 CXCL9Q07325 125 aa12.41□□□□□ -0.42
CCDC58-201ENST00000291458 SLFN5Q08AF3 891 aa12.41□□□□□ -0.42
CCDC58-201ENST00000291458 MAP1SQ66K74 1059 aaPredicted RBP12.41□□□□□ -0.42
CCDC58-201ENST00000291458 CIAPIN1Q6FI81 312 aa12.41□□□□□ -0.42
CCDC58-201ENST00000291458 LDHDQ86WU2 507 aa12.41□□□□□ -0.42
CCDC58-201ENST00000291458 TTLL11Q8NHH1 800 aa12.41□□□□□ -0.42
CCDC58-201ENST00000291458 CDC5LQ99459 802 aaKnown RBP12.41□□□□□ -0.42
CCDC58-201ENST00000291458 GGA1Q9UJY5 639 aa12.41□□□□□ -0.42
CCDC58-201ENST00000291458 SHTN1A0MZ66 631 aa12.4□□□□□ -0.42
CCDC58-201ENST00000291458 H7C1W4 665 aa12.4□□□□□ -0.42
CCDC58-201ENST00000291458 ITGA6P23229 1130 aa12.4□□□□□ -0.42
CCDC58-201ENST00000291458 BEND3Q5T5X7 828 aa12.4□□□□□ -0.42
CCDC58-201ENST00000291458 TBC1D16Q8TBP0 767 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms