RNA–Protein interactions for RNA: ENST00000287546.8

VPS8-201, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS8, Length 5,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-201ENST00000287546 CCDC152Q4G0S7 254 aa8.12□□□□□ -1.11
VPS8-201ENST00000287546 NEK1Q96PY6 1258 aa8.12□□□□□ -1.11
VPS8-201ENST00000287546 GRPEL1Q9HAV7 217 aa8.12□□□□□ -1.11
VPS8-201ENST00000287546 THRAP3Q9Y2W1 955 aaKnown RBP8.12□□□□□ -1.11
VPS8-201ENST00000287546 CDKL5O76039 1030 aa8.12□□□□□ -1.11
VPS8-201ENST00000287546 SLC3A2P08195 630 aaKnown RBP8.12□□□□□ -1.11
VPS8-201ENST00000287546 GPTP24298 496 aa8.12□□□□□ -1.11
VPS8-201ENST00000287546 MAP3K12Q12852 859 aa8.12□□□□□ -1.11
VPS8-201ENST00000287546 LRSAM1Q6UWE0 723 aa8.12□□□□□ -1.11
VPS8-201ENST00000287546 ANTXR1Q9H6X2 564 aa8.12□□□□□ -1.11
VPS8-201ENST00000287546 PCCAP05165 728 aaPredicted RBP8.12□□□□□ -1.11
VPS8-201ENST00000287546 NFXL1Q6ZNB6 911 aa8.12□□□□□ -1.11
VPS8-201ENST00000287546 CCDC83Q8IWF9 413 aa8.12□□□□□ -1.11
VPS8-201ENST00000287546 PXDNQ92626 1479 aa8.12□□□□□ -1.11
VPS8-201ENST00000287546 CIAO1O76071 339 aa8.11□□□□□ -1.11
VPS8-201ENST00000287546 CCDC173Q0VFZ6 552 aa8.11□□□□□ -1.11
VPS8-201ENST00000287546 FOXD4L6Q3SYB3 417 aaPredicted RBP8.11□□□□□ -1.11
VPS8-201ENST00000287546 FOXD4L3Q6VB84 417 aaPredicted RBP8.11□□□□□ -1.11
VPS8-201ENST00000287546 CFAP45Q9UL16 551 aa8.11□□□□□ -1.11
VPS8-201ENST00000287546 UQCRHLA0A096LP55 91 aa8.11□□□□□ -1.11
VPS8-201ENST00000287546 STX6O43752 255 aa8.11□□□□□ -1.11
VPS8-201ENST00000287546 ATP6V1AP38606 617 aa8.11□□□□□ -1.11
VPS8-201ENST00000287546 CREB3L3Q68CJ9 461 aa8.11□□□□□ -1.11
VPS8-201ENST00000287546 DNAJC10Q8IXB1 793 aa8.11□□□□□ -1.11
VPS8-201ENST00000287546 BICD2Q8TD16 824 aa8.11□□□□□ -1.11
VPS8-201ENST00000287546 USP42Q9H9J4 1324 aaKnown RBP8.11□□□□□ -1.11
VPS8-201ENST00000287546 ROBO1Q9Y6N7 1651 aa8.11□□□□□ -1.11
VPS8-201ENST00000287546 XIRP1Q702N8 1843 aaKnown RBP8.11□□□□□ -1.11
VPS8-201ENST00000287546 CBX1P83916 185 aa8.11□□□□□ -1.11
VPS8-201ENST00000287546 CCDC73Q6ZRK6 1079 aa8.11□□□□□ -1.11
VPS8-201ENST00000287546 SCAND2PQ9GZW5 306 aaPredicted RBP8.11□□□□□ -1.11
VPS8-201ENST00000287546 SAFBQ15424 915 aaKnown RBP eCLIP8.11□□□□□ -1.11
VPS8-201ENST00000287546 KBTBD3Q8NAB2 608 aa8.11□□□□□ -1.11
VPS8-201ENST00000287546 JARID2Q92833 1246 aaPredicted RBP8.11□□□□□ -1.11
VPS8-201ENST00000287546 EAF2Q96CJ1 260 aaPredicted RBP8.11□□□□□ -1.11
VPS8-201ENST00000287546 UTP14AQ9BVJ6 771 aaKnown RBP8.11□□□□□ -1.11
VPS8-201ENST00000287546 UTYO14607 1347 aa8.11□□□□□ -1.11
VPS8-201ENST00000287546 IRS4O14654 1257 aaPredicted RBP8.1□□□□□ -1.11
VPS8-201ENST00000287546 PDE8AO60658 829 aa8.1□□□□□ -1.11
VPS8-201ENST00000287546 DDX46Q7L014 1031 aaKnown RBP8.1□□□□□ -1.11
VPS8-201ENST00000287546 RUFY3Q7L099 469 aa8.1□□□□□ -1.11
VPS8-201ENST00000287546 TSPY26PQ9H489 355 aa8.1□□□□□ -1.11
VPS8-201ENST00000287546 RFX7Q2KHR2 1363 aa8.1□□□□□ -1.11
VPS8-201ENST00000287546 PRAMEF22A3QJZ6 481 aa8.1□□□□□ -1.11
VPS8-201ENST00000287546 RNF113AO15541 343 aaKnown RBP8.1□□□□□ -1.11
VPS8-201ENST00000287546 ZPR1O75312 459 aa8.1□□□□□ -1.11
VPS8-201ENST00000287546 TPM1P09493 284 aa8.1□□□□□ -1.11
VPS8-201ENST00000287546 NKX1-1Q15270 411 aaPredicted RBP8.1□□□□□ -1.11
VPS8-201ENST00000287546 CCDC85AQ96PX6 553 aaPredicted RBP8.1□□□□□ -1.11
VPS8-201ENST00000287546 SNX14Q9Y5W7 946 aa8.1□□□□□ -1.11
VPS8-201ENST00000287546 MAP3K15Q6ZN16 1313 aa8.1□□□□□ -1.11
VPS8-201ENST00000287546 FIBPO43427 364 aa8.1□□□□□ -1.11
VPS8-201ENST00000287546 IDH1O75874 414 aaKnown RBP8.1□□□□□ -1.11
VPS8-201ENST00000287546 ARHGEF6Q15052 776 aa8.1□□□□□ -1.11
VPS8-201ENST00000287546 GPR162Q16538 588 aa8.1□□□□□ -1.11
VPS8-201ENST00000287546 FAM98CQ17RN3 349 aaKnown RBP8.1□□□□□ -1.11
VPS8-201ENST00000287546 EP400NLQ6ZTU2 488 aa8.1□□□□□ -1.11
VPS8-201ENST00000287546 ZBTB38Q8NAP3 1195 aaPredicted RBP8.1□□□□□ -1.11
VPS8-201ENST00000287546 PI4K2BQ8TCG2 481 aa8.1□□□□□ -1.11
VPS8-201ENST00000287546 SH3TC1Q8TE82 1336 aa8.1□□□□□ -1.11
VPS8-201ENST00000287546 LPXNO60711 386 aa8.1□□□□□ -1.11
VPS8-201ENST00000287546 IPO7O95373 1038 aaKnown RBP8.1□□□□□ -1.11
VPS8-201ENST00000287546 IGKV5-2P06315 115 aa8.1□□□□□ -1.11
VPS8-201ENST00000287546 CAVIN4Q5BKX8 364 aa8.1□□□□□ -1.11
VPS8-201ENST00000287546 FAM182BQ5T319 152 aa8.1□□□□□ -1.11
VPS8-201ENST00000287546 ZMYND15Q9H091 742 aa8.1□□□□□ -1.11
VPS8-201ENST00000287546 USP21Q9UK80 565 aa8.1□□□□□ -1.11
VPS8-201ENST00000287546 A0A1B0GUL7 405 aa8.09□□□□□ -1.11
VPS8-201ENST00000287546 H7C1W4 665 aa8.09□□□□□ -1.11
VPS8-201ENST00000287546 ZSCAN22P10073 491 aaPredicted RBP8.09□□□□□ -1.11
VPS8-201ENST00000287546 XBP1P17861 261 aa8.09□□□□□ -1.11
VPS8-201ENST00000287546 IL6STP40189 918 aaPredicted RBP8.09□□□□□ -1.11
VPS8-201ENST00000287546 AK2P54819 239 aa8.09□□□□□ -1.11
VPS8-201ENST00000287546 GIGYF2Q6Y7W6 1299 aaKnown RBP8.09□□□□□ -1.11
VPS8-201ENST00000287546 PCMTD1Q96MG8 357 aaPredicted RBP8.09□□□□□ -1.11
VPS8-201ENST00000287546 DBNDD2Q9BQY9 259 aa8.09□□□□□ -1.11
VPS8-201ENST00000287546 CCDC87Q9NVE4 849 aa8.09□□□□□ -1.11
VPS8-201ENST00000287546 ZNF213O14771 459 aa8.09□□□□□ -1.11
VPS8-201ENST00000287546 LMOD1P29536 600 aaPredicted RBP8.09□□□□□ -1.11
VPS8-201ENST00000287546 MPHOSPH6Q99547 160 aaKnown RBP8.09□□□□□ -1.11
VPS8-201ENST00000287546 JCADQ9P266 1359 aa8.09□□□□□ -1.11
VPS8-201ENST00000287546 USP54Q70EL1 1684 aa8.09□□□□□ -1.11
VPS8-201ENST00000287546 TTLL7Q6ZT98 887 aa8.09□□□□□ -1.11
VPS8-201ENST00000287546 ANKRD20A12PQ8NF67 263 aa8.09□□□□□ -1.11
VPS8-201ENST00000287546 UBE2Q2Q8WVN8 375 aa8.09□□□□□ -1.11
VPS8-201ENST00000287546 HAUS7Q99871 368 aa8.09□□□□□ -1.11
VPS8-201ENST00000287546 NYXQ9GZU5 481 aa8.09□□□□□ -1.11
VPS8-201ENST00000287546 FAM208AQ9UK61 1670 aaKnown RBP8.09□□□□□ -1.11
VPS8-201ENST00000287546 MEGF6O75095 1541 aa8.09□□□□□ -1.11
VPS8-201ENST00000287546 GJB2P29033 226 aa8.09□□□□□ -1.11
VPS8-201ENST00000287546 BIRC2Q13490 618 aa8.09□□□□□ -1.11
VPS8-201ENST00000287546 ERVV-1B6SEH8 477 aa8.08□□□□□ -1.12
VPS8-201ENST00000287546 LRP2BPQ9P2M1 347 aa8.08□□□□□ -1.12
VPS8-201ENST00000287546 STK3Q13188 491 aa8.08□□□□□ -1.12
VPS8-201ENST00000287546 SASS6Q6UVJ0 657 aa8.08□□□□□ -1.12
VPS8-201ENST00000287546 WASF1Q92558 559 aa8.08□□□□□ -1.12
VPS8-201ENST00000287546 RNF41Q9H4P4 317 aaPredicted RBP8.08□□□□□ -1.12
VPS8-201ENST00000287546 PRIM1P49642 420 aaKnown RBP8.08□□□□□ -1.12
VPS8-201ENST00000287546 TRIM28Q13263 835 aaKnown RBP8.08□□□□□ -1.12
VPS8-201ENST00000287546 JMYQ8N9B5 988 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms