RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 ANKRD18AQ8IVF6 992 aa16.22■□□□□ 0.19
ACER3-201ENST00000278544 PNPLA7Q6ZV29 1317 aa16.21■□□□□ 0.19
ACER3-201ENST00000278544 ERC2O15083 957 aa16.21■□□□□ 0.19
ACER3-201ENST00000278544 GLRX3O76003 335 aaKnown RBP16.21■□□□□ 0.19
ACER3-201ENST00000278544 AKT1S1Q96B36 256 aa16.21■□□□□ 0.19
ACER3-201ENST00000278544 C22orf23Q9BZE7 217 aa16.21■□□□□ 0.19
ACER3-201ENST00000278544 N4BP2Q86UW6 1770 aaPredicted RBP16.21■□□□□ 0.19
ACER3-201ENST00000278544 NYXQ9GZU5 481 aa16.21■□□□□ 0.19
ACER3-201ENST00000278544 CHRNDQ07001 517 aa16.2■□□□□ 0.18
ACER3-201ENST00000278544 TTC39AQ5SRH9 613 aa16.2■□□□□ 0.18
ACER3-201ENST00000278544 FAM227BQ96M60 508 aa16.2■□□□□ 0.18
ACER3-201ENST00000278544 STK32BQ9NY57 414 aa16.2■□□□□ 0.18
ACER3-201ENST00000278544 SLC15A2Q16348 729 aa16.2■□□□□ 0.18
ACER3-201ENST00000278544 ZBTB7AO95365 584 aa16.2■□□□□ 0.18
ACER3-201ENST00000278544 IFIT1P09914 478 aaKnown RBP16.2■□□□□ 0.18
ACER3-201ENST00000278544 STAP2Q9UGK3 403 aa16.2■□□□□ 0.18
ACER3-201ENST00000278544 PSDA5PKW4 1024 aaPredicted RBP16.19■□□□□ 0.18
ACER3-201ENST00000278544 KLRK1P26718 216 aa16.19■□□□□ 0.18
ACER3-201ENST00000278544 PHKA1P46020 1223 aa16.19■□□□□ 0.18
ACER3-201ENST00000278544 CNTROBQ8N137 903 aa16.19■□□□□ 0.18
ACER3-201ENST00000278544 SEC62Q99442 399 aaKnown RBP16.19■□□□□ 0.18
ACER3-201ENST00000278544 BCAMP50895 628 aa16.19■□□□□ 0.18
ACER3-201ENST00000278544 OSBPL3Q9H4L5 887 aa16.19■□□□□ 0.18
ACER3-201ENST00000278544 DIAPH3Q9NSV4 1193 aa16.19■□□□□ 0.18
ACER3-201ENST00000278544 TAF1LQ8IZX4 1826 aa16.19■□□□□ 0.18
ACER3-201ENST00000278544 COL4A1P02462 1669 aa16.19■□□□□ 0.18
ACER3-201ENST00000278544 GYG1P46976 350 aa16.19■□□□□ 0.18
ACER3-201ENST00000278544 CASC1Q6TDU7 716 aa16.19■□□□□ 0.18
ACER3-201ENST00000278544 RPGRQ92834 1020 aaKnown RBP16.19■□□□□ 0.18
ACER3-201ENST00000278544 PDE8BO95263 885 aa16.18■□□□□ 0.18
ACER3-201ENST00000278544 CHMLP26374 656 aa16.18■□□□□ 0.18
ACER3-201ENST00000278544 KCNJ4P48050 445 aa16.18■□□□□ 0.18
ACER3-201ENST00000278544 RPS8P62241 208 aaKnown RBP16.18■□□□□ 0.18
ACER3-201ENST00000278544 ATF5Q9Y2D1 282 aaPredicted RBP16.18■□□□□ 0.18
ACER3-201ENST00000278544 LY75O60449 1722 aa16.18■□□□□ 0.18
ACER3-201ENST00000278544 ADRA2BP18089 450 aa16.18■□□□□ 0.18
ACER3-201ENST00000278544 CCDC129Q6ZRS4 1044 aa16.18■□□□□ 0.18
ACER3-201ENST00000278544 ZNF622Q969S3 477 aaKnown RBP eCLIP16.18■□□□□ 0.18
ACER3-201ENST00000278544 CDC5LQ99459 802 aaKnown RBP16.18■□□□□ 0.18
ACER3-201ENST00000278544 ANKIB1Q9P2G1 1089 aa16.18■□□□□ 0.18
ACER3-201ENST00000278544 NOL8Q76FK4 1167 aaKnown RBP16.18■□□□□ 0.18
ACER3-201ENST00000278544 POLRMTO00411 1230 aaKnown RBP16.17■□□□□ 0.18
ACER3-201ENST00000278544 FRAT2O75474 233 aaPredicted RBP16.17■□□□□ 0.18
ACER3-201ENST00000278544 ST5P78524 1137 aa16.17■□□□□ 0.18
ACER3-201ENST00000278544 CCDC158Q5M9N0 1113 aa16.17■□□□□ 0.18
ACER3-201ENST00000278544 NSFL1CQ9UNZ2 370 aaKnown RBP16.17■□□□□ 0.18
ACER3-201ENST00000278544 ZAP70P43403 619 aa16.16■□□□□ 0.18
ACER3-201ENST00000278544 PARP3Q9Y6F1 533 aa16.16■□□□□ 0.18
ACER3-201ENST00000278544 TM4SF1P30408 202 aa16.16■□□□□ 0.18
ACER3-201ENST00000278544 CHRNA5P30532 468 aa16.15■□□□□ 0.18
ACER3-201ENST00000278544 VPS37DQ86XT2 251 aa16.15■□□□□ 0.18
ACER3-201ENST00000278544 MINPP1Q9UNW1 487 aa16.15■□□□□ 0.18
ACER3-201ENST00000278544 TTC41PQ6P2S7 1318 aa16.15■□□□□ 0.18
ACER3-201ENST00000278544 CIAO1O76071 339 aa16.15■□□□□ 0.18
ACER3-201ENST00000278544 FOXD4L1Q9NU39 408 aa16.15■□□□□ 0.18
ACER3-201ENST00000278544 AKAP2Q9Y2D5 859 aa16.15■□□□□ 0.18
ACER3-201ENST00000278544 IDH1O75874 414 aaKnown RBP16.15■□□□□ 0.18
ACER3-201ENST00000278544 NMIQ13287 307 aaPredicted RBP16.15■□□□□ 0.18
ACER3-201ENST00000278544 R3HDM1Q15032 1099 aaKnown RBP16.15■□□□□ 0.18
ACER3-201ENST00000278544 NLGN1Q8N2Q7 840 aa16.15■□□□□ 0.18
ACER3-201ENST00000278544 CCDC102BQ68D86 513 aa16.14■□□□□ 0.17
ACER3-201ENST00000278544 RIC1Q4ADV7 1423 aa16.14■□□□□ 0.17
ACER3-201ENST00000278544 A0A0D9SFI3 127 aa16.14■□□□□ 0.17
ACER3-201ENST00000278544 TXNRD3Q86VQ6 643 aa16.14■□□□□ 0.17
ACER3-201ENST00000278544 ESYT1Q9BSJ8 1104 aa16.14■□□□□ 0.17
ACER3-201ENST00000278544 ANKRD36CQ5JPF3 1778 aa16.14■□□□□ 0.17
ACER3-201ENST00000278544 DTNBO60941 627 aa16.14■□□□□ 0.17
ACER3-201ENST00000278544 MCAMP43121 646 aa16.14■□□□□ 0.17
ACER3-201ENST00000278544 CHAF1AQ13111 956 aaPredicted RBP16.14■□□□□ 0.17
ACER3-201ENST00000278544 DAXXQ9UER7 740 aaPredicted RBP16.14■□□□□ 0.17
ACER3-201ENST00000278544 ABCF2Q9UG63 623 aa16.14■□□□□ 0.17
ACER3-201ENST00000278544 SF3B3Q15393 1217 aaKnown RBP16.13■□□□□ 0.17
ACER3-201ENST00000278544 TBC1D32Q96NH3 1257 aa16.13■□□□□ 0.17
ACER3-201ENST00000278544 PAG1Q9NWQ8 432 aa16.13■□□□□ 0.17
ACER3-201ENST00000278544 HSP90B1P14625 803 aaKnown RBP16.13■□□□□ 0.17
ACER3-201ENST00000278544 PUM3Q15397 648 aaKnown RBP16.13■□□□□ 0.17
ACER3-201ENST00000278544 WASHC4Q2M389 1173 aa16.13■□□□□ 0.17
ACER3-201ENST00000278544 VGLL2Q8N8G2 317 aa16.13■□□□□ 0.17
ACER3-201ENST00000278544 ATP5JP18859 108 aa16.12■□□□□ 0.17
ACER3-201ENST00000278544 LARP6Q9BRS8 491 aaKnown RBP16.12■□□□□ 0.17
ACER3-201ENST00000278544 EVI5LQ96CN4 794 aa16.12■□□□□ 0.17
ACER3-201ENST00000278544 RIMBP2O15034 1052 aa16.12■□□□□ 0.17
ACER3-201ENST00000278544 SLC5A1P13866 664 aa16.12■□□□□ 0.17
ACER3-201ENST00000278544 C4AP0C0L4 1744 aa16.12■□□□□ 0.17
ACER3-201ENST00000278544 UBR3Q6ZT12 1888 aa16.12■□□□□ 0.17
ACER3-201ENST00000278544 SLC10A5Q5PT55 438 aa16.11■□□□□ 0.17
ACER3-201ENST00000278544 ZNF589Q86UQ0 364 aaPredicted RBP16.11■□□□□ 0.17
ACER3-201ENST00000278544 PALD1Q9ULE6 856 aa16.11■□□□□ 0.17
ACER3-201ENST00000278544 ZNF609O15014 1411 aa16.11■□□□□ 0.17
ACER3-201ENST00000278544 PTH1RQ03431 593 aa16.11■□□□□ 0.17
ACER3-201ENST00000278544 LPIN2Q92539 896 aa16.11■□□□□ 0.17
ACER3-201ENST00000278544 C6orf229H3BNL8 230 aa16.1■□□□□ 0.17
ACER3-201ENST00000278544 STK11IPQ8N1F8 1099 aa16.1■□□□□ 0.17
ACER3-201ENST00000278544 MROH5Q6ZUA9 1318 aa16.1■□□□□ 0.17
ACER3-201ENST00000278544 KIAA1211Q6ZU35 1233 aa16.1■□□□□ 0.17
ACER3-201ENST00000278544 FBXW7Q969H0 707 aa16.1■□□□□ 0.17
ACER3-201ENST00000278544 IPO9Q96P70 1041 aaKnown RBP16.1■□□□□ 0.17
ACER3-201ENST00000278544 UPF3BQ9BZI7 483 aaKnown RBP16.1■□□□□ 0.17
ACER3-201ENST00000278544 BSDC1Q9NW68 430 aaPredicted RBP16.1■□□□□ 0.17
ACER3-201ENST00000278544 HAUS7Q99871 368 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms