RNA–Protein interactions for RNA: ENST00000278302.9

TRIM6-201, Transcript of tripartite motif containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM6, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-201ENST00000278302 KLHDC4Q8TBB5 520 aa8.93□□□□□ -0.98
TRIM6-201ENST00000278302 FAM200AQ8TCP9 573 aa8.93□□□□□ -0.98
TRIM6-201ENST00000278302 DDX17Q92841 729 aaKnown RBP8.93□□□□□ -0.98
TRIM6-201ENST00000278302 KAZALD1Q96I82 304 aa8.93□□□□□ -0.98
TRIM6-201ENST00000278302 FSD1Q9BTV5 496 aa8.93□□□□□ -0.98
TRIM6-201ENST00000278302 FHOD1Q9Y613 1164 aa8.93□□□□□ -0.98
TRIM6-201ENST00000278302 SLIT3O75094 1523 aa8.93□□□□□ -0.98
TRIM6-201ENST00000278302 MYO1CO00159 1063 aa8.93□□□□□ -0.98
TRIM6-201ENST00000278302 STX6O43752 255 aa8.93□□□□□ -0.98
TRIM6-201ENST00000278302 MYCNP04198 464 aaPredicted RBP8.93□□□□□ -0.98
TRIM6-201ENST00000278302 IGKV5-2P06315 115 aa8.93□□□□□ -0.98
TRIM6-201ENST00000278302 ZSCAN22P10073 491 aaPredicted RBP8.93□□□□□ -0.98
TRIM6-201ENST00000278302 PHKG2P15735 406 aa8.93□□□□□ -0.98
TRIM6-201ENST00000278302 IFNL2Q8IZJ0 200 aa8.93□□□□□ -0.98
TRIM6-201ENST00000278302 TMEM87AQ8NBN3 555 aa8.93□□□□□ -0.98
TRIM6-201ENST00000278302 CLIP2Q9UDT6 1046 aa8.93□□□□□ -0.98
TRIM6-201ENST00000278302 PHRF1Q9P1Y6 1649 aaKnown RBP8.93□□□□□ -0.98
TRIM6-201ENST00000278302 NPHP3Q7Z494 1330 aa8.93□□□□□ -0.98
TRIM6-201ENST00000278302 SYT1P21579 422 aa8.93□□□□□ -0.98
TRIM6-201ENST00000278302 PLA2G4AP47712 749 aa8.93□□□□□ -0.98
TRIM6-201ENST00000278302 PIP4K2AP48426 406 aaPredicted RBP8.93□□□□□ -0.98
TRIM6-201ENST00000278302 NMIQ13287 307 aaPredicted RBP8.93□□□□□ -0.98
TRIM6-201ENST00000278302 ADCK5Q3MIX3 580 aa8.93□□□□□ -0.98
TRIM6-201ENST00000278302 ANO6Q4KMQ2 910 aa8.93□□□□□ -0.98
TRIM6-201ENST00000278302 ANKRD13DQ6ZTN6 518 aa8.93□□□□□ -0.98
TRIM6-201ENST00000278302 ZSCAN31Q96LW9 406 aaPredicted RBP8.93□□□□□ -0.98
TRIM6-201ENST00000278302 FAM227BQ96M60 508 aa8.93□□□□□ -0.98
TRIM6-201ENST00000278302 EFCC1Q9HA90 598 aa8.93□□□□□ -0.98
TRIM6-201ENST00000278302 RBM8AQ9Y5S9 174 aaKnown RBP8.93□□□□□ -0.98
TRIM6-201ENST00000278302 MRVI1Q9Y6F6 885 aa8.93□□□□□ -0.98
TRIM6-201ENST00000278302 NEURL1BA8MQ27 555 aa8.92□□□□□ -0.98
TRIM6-201ENST00000278302 CLCN6P51797 869 aa8.92□□□□□ -0.98
TRIM6-201ENST00000278302 GCKRQ14397 625 aa8.92□□□□□ -0.98
TRIM6-201ENST00000278302 BMS1Q14692 1282 aaKnown RBP8.92□□□□□ -0.98
TRIM6-201ENST00000278302 VPS53Q5VIR6 699 aa8.92□□□□□ -0.98
TRIM6-201ENST00000278302 EP400NLQ6ZTU2 488 aa8.92□□□□□ -0.98
TRIM6-201ENST00000278302 DHX37Q8IY37 1157 aaKnown RBP8.92□□□□□ -0.98
TRIM6-201ENST00000278302 CABLES1Q8TDN4 633 aa8.92□□□□□ -0.98
TRIM6-201ENST00000278302 SMARCE1Q969G3 411 aa8.92□□□□□ -0.98
TRIM6-201ENST00000278302 ERO1AQ96HE7 468 aa8.92□□□□□ -0.98
TRIM6-201ENST00000278302 ZNF496Q96IT1 587 aaPredicted RBP8.92□□□□□ -0.98
TRIM6-201ENST00000278302 CBX8Q9HC52 389 aa8.92□□□□□ -0.98
TRIM6-201ENST00000278302 ATP6V1DQ9Y5K8 247 aa8.92□□□□□ -0.98
TRIM6-201ENST00000278302 UTYO14607 1347 aa8.92□□□□□ -0.98
TRIM6-201ENST00000278302 CCDC171Q6TFL3 1326 aa8.92□□□□□ -0.98
TRIM6-201ENST00000278302 C1orf167Q5SNV9 1468 aa8.92□□□□□ -0.98
TRIM6-201ENST00000278302 PNMA6AP0CW24 399 aaPredicted RBP8.92□□□□□ -0.98
TRIM6-201ENST00000278302 TYRO3Q06418 890 aa8.92□□□□□ -0.98
TRIM6-201ENST00000278302 CHRNA2Q15822 529 aa8.92□□□□□ -0.98
TRIM6-201ENST00000278302 CCDC191Q8NCU4 936 aa8.92□□□□□ -0.98
TRIM6-201ENST00000278302 METTL22Q9BUU2 404 aaPredicted RBP8.92□□□□□ -0.98
TRIM6-201ENST00000278302 TLR7Q9NYK1 1049 aaKnown RBP8.92□□□□□ -0.98
TRIM6-201ENST00000278302 USP16Q9Y5T5 823 aa8.92□□□□□ -0.98
TRIM6-201ENST00000278302 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.92□□□□□ -0.98
TRIM6-201ENST00000278302 ZNF142P52746 1687 aaPredicted RBP8.92□□□□□ -0.98
TRIM6-201ENST00000278302 SLU7O95391 586 aaKnown RBP8.92□□□□□ -0.98
TRIM6-201ENST00000278302 LARGE1O95461 756 aa8.92□□□□□ -0.98
TRIM6-201ENST00000278302 SNRPA1P09661 255 aaKnown RBP8.92□□□□□ -0.98
TRIM6-201ENST00000278302 GJB2P29033 226 aa8.92□□□□□ -0.98
TRIM6-201ENST00000278302 ZNF75DP51815 510 aa8.92□□□□□ -0.98
TRIM6-201ENST00000278302 CREB3L3Q68CJ9 461 aa8.92□□□□□ -0.98
TRIM6-201ENST00000278302 ZSWIM6Q9HCJ5 1215 aa8.92□□□□□ -0.98
TRIM6-201ENST00000278302 F13A1P00488 732 aa8.91□□□□□ -0.98
TRIM6-201ENST00000278302 PSMA5P28066 241 aa8.91□□□□□ -0.98
TRIM6-201ENST00000278302 NECTIN1Q15223 517 aa8.91□□□□□ -0.98
TRIM6-201ENST00000278302 RNF20Q5VTR2 975 aa8.91□□□□□ -0.98
TRIM6-201ENST00000278302 FAM173BQ6P4H8 233 aa8.91□□□□□ -0.98
TRIM6-201ENST00000278302 TM6SF1Q9BZW5 370 aa8.91□□□□□ -0.98
TRIM6-201ENST00000278302 SH2B1Q9NRF2 756 aaPredicted RBP8.91□□□□□ -0.98
TRIM6-201ENST00000278302 APPP05067 770 aa8.91□□□□□ -0.98
TRIM6-201ENST00000278302 LIG1P18858 919 aa8.91□□□□□ -0.98
TRIM6-201ENST00000278302 CABP4P57796 275 aa8.91□□□□□ -0.98
TRIM6-201ENST00000278302 EPHA10Q5JZY3 1008 aa8.91□□□□□ -0.98
TRIM6-201ENST00000278302 GORABQ5T7V8 394 aa8.91□□□□□ -0.98
TRIM6-201ENST00000278302 GPATCH11Q8N954 259 aa8.91□□□□□ -0.98
TRIM6-201ENST00000278302 FMNL2Q96PY5 1086 aa8.91□□□□□ -0.98
TRIM6-201ENST00000278302 GEMIN8Q9NWZ8 242 aaKnown RBP8.91□□□□□ -0.98
TRIM6-201ENST00000278302 VPS37CA5D8V6 355 aaPredicted RBP8.9□□□□□ -0.98
TRIM6-201ENST00000278302 ZSCAN26Q16670 478 aa8.9□□□□□ -0.98
TRIM6-201ENST00000278302 FILIP1Q7Z7B0 1213 aa8.9□□□□□ -0.98
TRIM6-201ENST00000278302 NECAB1Q8N987 351 aa8.9□□□□□ -0.98
TRIM6-201ENST00000278302 RGPD5Q99666 1765 aa8.9□□□□□ -0.98
TRIM6-201ENST00000278302 ATP5J2-PTCD1G3V325 749 aa8.9□□□□□ -0.98
TRIM6-201ENST00000278302 PTCD1O75127 700 aaKnown RBP8.9□□□□□ -0.98
TRIM6-201ENST00000278302 SEC31AO94979 1220 aaKnown RBP8.9□□□□□ -0.98
TRIM6-201ENST00000278302 SKILP12757 684 aa8.9□□□□□ -0.98
TRIM6-201ENST00000278302 MAP3K11Q16584 847 aa8.9□□□□□ -0.98
TRIM6-201ENST00000278302 UBE3BQ7Z3V4 1068 aa8.9□□□□□ -0.98
TRIM6-201ENST00000278302 MAP4K1Q92918 833 aa8.9□□□□□ -0.98
TRIM6-201ENST00000278302 DCAF5Q96JK2 942 aa8.9□□□□□ -0.98
TRIM6-201ENST00000278302 RNF216Q9NWF9 866 aaPredicted RBP8.9□□□□□ -0.98
TRIM6-201ENST00000278302 A0A0D9SFI3 127 aa8.9□□□□□ -0.99
TRIM6-201ENST00000278302 SLC27A2O14975 620 aa8.9□□□□□ -0.99
TRIM6-201ENST00000278302 H2AFXP16104 143 aaPredicted RBP8.9□□□□□ -0.99
TRIM6-201ENST00000278302 CASQ1P31415 396 aa8.9□□□□□ -0.99
TRIM6-201ENST00000278302 PSEN1P49768 467 aa8.9□□□□□ -0.99
TRIM6-201ENST00000278302 ARHGAP29Q52LW3 1261 aa8.9□□□□□ -0.99
TRIM6-201ENST00000278302 BLOC1S2Q6QNY1 142 aa8.9□□□□□ -0.99
TRIM6-201ENST00000278302 NYAP1Q6ZVC0 841 aa8.9□□□□□ -0.99
TRIM6-201ENST00000278302 PLA2G4DQ86XP0 818 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms