RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 UBE2HP62256 183 aa18.91■□□□□ 0.62
MAP1LC3B-201ENST00000268607 MTX1Q13505 466 aa18.91■□□□□ 0.62
MAP1LC3B-201ENST00000268607 HSP90AB4PQ58FF6 505 aa18.91■□□□□ 0.62
MAP1LC3B-201ENST00000268607 EPHA10Q5JZY3 1008 aa18.91■□□□□ 0.62
MAP1LC3B-201ENST00000268607 CCDC8Q9H0W5 538 aaPredicted RBP18.91■□□□□ 0.62
MAP1LC3B-201ENST00000268607 NEXNQ0ZGT2 675 aa18.9■□□□□ 0.62
MAP1LC3B-201ENST00000268607 TAF7LQ5H9L4 462 aa18.9■□□□□ 0.62
MAP1LC3B-201ENST00000268607 AACSQ86V21 672 aa18.9■□□□□ 0.62
MAP1LC3B-201ENST00000268607 LARP6Q9BRS8 491 aaKnown RBP18.9■□□□□ 0.62
MAP1LC3B-201ENST00000268607 NEURL1BA8MQ27 555 aa18.9■□□□□ 0.62
MAP1LC3B-201ENST00000268607 FUCA2Q9BTY2 467 aa18.9■□□□□ 0.62
MAP1LC3B-201ENST00000268607 GLI3P10071 1580 aa18.9■□□□□ 0.62
MAP1LC3B-201ENST00000268607 IFIT2P09913 472 aaKnown RBP18.89■□□□□ 0.62
MAP1LC3B-201ENST00000268607 SASH1O94885 1247 aa18.89■□□□□ 0.61
MAP1LC3B-201ENST00000268607 NCBP1Q09161 790 aaKnown RBP18.89■□□□□ 0.61
MAP1LC3B-201ENST00000268607 UBE3BQ7Z3V4 1068 aa18.89■□□□□ 0.61
MAP1LC3B-201ENST00000268607 SYNE4Q8N205 404 aa18.89■□□□□ 0.61
MAP1LC3B-201ENST00000268607 CDCA7Q9BWT1 371 aaPredicted RBP18.89■□□□□ 0.61
MAP1LC3B-201ENST00000268607 ZSCAN22P10073 491 aaPredicted RBP18.88■□□□□ 0.61
MAP1LC3B-201ENST00000268607 GPTP24298 496 aa18.88■□□□□ 0.61
MAP1LC3B-201ENST00000268607 GABPB1Q06547 395 aaPredicted RBP18.88■□□□□ 0.61
MAP1LC3B-201ENST00000268607 ITPK1Q13572 414 aa18.88■□□□□ 0.61
MAP1LC3B-201ENST00000268607 CNTROBQ8N137 903 aa18.88■□□□□ 0.61
MAP1LC3B-201ENST00000268607 CCDC85AQ96PX6 553 aaPredicted RBP18.88■□□□□ 0.61
MAP1LC3B-201ENST00000268607 CTNNA3Q9UI47 895 aa18.88■□□□□ 0.61
MAP1LC3B-201ENST00000268607 UTRNP46939 3433 aa18.88■□□□□ 0.61
MAP1LC3B-201ENST00000268607 AOX1Q06278 1338 aa18.88■□□□□ 0.61
MAP1LC3B-201ENST00000268607 G3BP1Q13283 466 aaKnown RBP eCLIP18.88■□□□□ 0.61
MAP1LC3B-201ENST00000268607 GCKRQ14397 625 aa18.88■□□□□ 0.61
MAP1LC3B-201ENST00000268607 DTNBO60941 627 aa18.87■□□□□ 0.61
MAP1LC3B-201ENST00000268607 HLFQ16534 295 aa18.87■□□□□ 0.61
MAP1LC3B-201ENST00000268607 SEPT12Q8IYM1 358 aa18.87■□□□□ 0.61
MAP1LC3B-201ENST00000268607 EAF2Q96CJ1 260 aaPredicted RBP18.87■□□□□ 0.61
MAP1LC3B-201ENST00000268607 METTL22Q9BUU2 404 aaPredicted RBP18.87■□□□□ 0.61
MAP1LC3B-201ENST00000268607 TLR7Q9NYK1 1049 aaKnown RBP18.87■□□□□ 0.61
MAP1LC3B-201ENST00000268607 DOT1LQ8TEK3 1739 aa18.87■□□□□ 0.61
MAP1LC3B-201ENST00000268607 CYP19A1P11511 503 aaPredicted RBP18.87■□□□□ 0.61
MAP1LC3B-201ENST00000268607 LOC102724428A0A0B4J2F2 783 aa18.87■□□□□ 0.61
MAP1LC3B-201ENST00000268607 SIK1P57059 783 aa18.87■□□□□ 0.61
MAP1LC3B-201ENST00000268607 TUBGCP6Q96RT7 1819 aa18.86■□□□□ 0.61
MAP1LC3B-201ENST00000268607 A0A087WZG4 1122 aa18.86■□□□□ 0.61
MAP1LC3B-201ENST00000268607 STX6O43752 255 aa18.86■□□□□ 0.61
MAP1LC3B-201ENST00000268607 SYT1P21579 422 aa18.86■□□□□ 0.61
MAP1LC3B-201ENST00000268607 ECHDC1Q9NTX5 307 aa18.86■□□□□ 0.61
MAP1LC3B-201ENST00000268607 SGSM2O43147 1006 aa18.86■□□□□ 0.61
MAP1LC3B-201ENST00000268607 GLRX3O76003 335 aaKnown RBP18.86■□□□□ 0.61
MAP1LC3B-201ENST00000268607 STARD3NLO95772 234 aa18.86■□□□□ 0.61
MAP1LC3B-201ENST00000268607 PTGS1P23219 599 aa18.86■□□□□ 0.61
MAP1LC3B-201ENST00000268607 TPM3P06753 285 aa18.85■□□□□ 0.61
MAP1LC3B-201ENST00000268607 NAA30Q147X3 362 aaPredicted RBP18.85■□□□□ 0.61
MAP1LC3B-201ENST00000268607 GOLGA6L6A8MZA4 724 aa18.85■□□□□ 0.61
MAP1LC3B-201ENST00000268607 F13A1P00488 732 aa18.84■□□□□ 0.61
MAP1LC3B-201ENST00000268607 PLBD2Q8NHP8 589 aa18.84■□□□□ 0.61
MAP1LC3B-201ENST00000268607 DDX41Q9UJV9 622 aaKnown RBP18.84■□□□□ 0.61
MAP1LC3B-201ENST00000268607 NWD2Q9ULI1 1742 aa18.84■□□□□ 0.61
MAP1LC3B-201ENST00000268607 PLEKHG2Q9H7P9 1386 aa18.84■□□□□ 0.61
MAP1LC3B-201ENST00000268607 UTYO14607 1347 aa18.84■□□□□ 0.61
MAP1LC3B-201ENST00000268607 RASEFQ8IZ41 740 aa18.84■□□□□ 0.61
MAP1LC3B-201ENST00000268607 BOLA2Q9H3K6 86 aa18.84■□□□□ 0.61
MAP1LC3B-201ENST00000268607 HDAC5Q9UQL6 1122 aa18.84■□□□□ 0.61
MAP1LC3B-201ENST00000268607 TERF2Q15554 542 aa18.83■□□□□ 0.61
MAP1LC3B-201ENST00000268607 PAXIP1Q6ZW49 1069 aaPredicted RBP18.83■□□□□ 0.61
MAP1LC3B-201ENST00000268607 C16orf45Q96MC5 204 aaPredicted RBP18.83■□□□□ 0.61
MAP1LC3B-201ENST00000268607 CHMP3Q9Y3E7 222 aa18.83■□□□□ 0.61
MAP1LC3B-201ENST00000268607 PALLDQ8WX93 1383 aa18.83■□□□□ 0.6
MAP1LC3B-201ENST00000268607 TTC41PQ6P2S7 1318 aa18.83■□□□□ 0.6
MAP1LC3B-201ENST00000268607 CPA1P15085 419 aa18.83■□□□□ 0.6
MAP1LC3B-201ENST00000268607 HSPA4P34932 840 aa18.83■□□□□ 0.6
MAP1LC3B-201ENST00000268607 DNM1Q05193 864 aaKnown RBP18.83■□□□□ 0.6
MAP1LC3B-201ENST00000268607 ERC1Q8IUD2 1116 aa18.83■□□□□ 0.6
MAP1LC3B-201ENST00000268607 CRKLP46109 303 aaKnown RBP18.82■□□□□ 0.6
MAP1LC3B-201ENST00000268607 IL17RAQ96F46 866 aa18.82■□□□□ 0.6
MAP1LC3B-201ENST00000268607 LSG1Q9H089 658 aaKnown RBP18.82■□□□□ 0.6
MAP1LC3B-201ENST00000268607 TRPC5Q9UL62 973 aaPredicted RBP18.82■□□□□ 0.6
MAP1LC3B-201ENST00000268607 CCDC66A2RUB6 948 aa18.82■□□□□ 0.6
MAP1LC3B-201ENST00000268607 FAM89AQ96GI7 184 aa18.82■□□□□ 0.6
MAP1LC3B-201ENST00000268607 TIGD1Q96MW7 591 aa18.82■□□□□ 0.6
MAP1LC3B-201ENST00000268607 UBR2Q8IWV8 1755 aa18.82■□□□□ 0.6
MAP1LC3B-201ENST00000268607 WNK3Q9BYP7 1800 aa18.81■□□□□ 0.6
MAP1LC3B-201ENST00000268607 AK2P54819 239 aa18.81■□□□□ 0.6
MAP1LC3B-201ENST00000268607 PTH1RQ03431 593 aa18.81■□□□□ 0.6
MAP1LC3B-201ENST00000268607 LRMPQ12912 555 aa18.81■□□□□ 0.6
MAP1LC3B-201ENST00000268607 ERICH4A6NGS2 130 aa18.81■□□□□ 0.6
MAP1LC3B-201ENST00000268607 EDC3Q96F86 508 aaKnown RBP18.81■□□□□ 0.6
MAP1LC3B-201ENST00000268607 GPATCH3Q96I76 525 aa18.81■□□□□ 0.6
MAP1LC3B-201ENST00000268607 SMC3Q9UQE7 1217 aa18.81■□□□□ 0.6
MAP1LC3B-201ENST00000268607 NDUFB9Q9Y6M9 179 aa18.81■□□□□ 0.6
MAP1LC3B-201ENST00000268607 CCDC192P0DO97 292 aa18.8■□□□□ 0.6
MAP1LC3B-201ENST00000268607 SNX14Q9Y5W7 946 aa18.8■□□□□ 0.6
MAP1LC3B-201ENST00000268607 RAD50Q92878 1312 aa18.8■□□□□ 0.6
MAP1LC3B-201ENST00000268607 INTS5Q6P9B9 1019 aaKnown RBP18.8■□□□□ 0.6
MAP1LC3B-201ENST00000268607 RUFY3Q7L099 469 aa18.8■□□□□ 0.6
MAP1LC3B-201ENST00000268607 CCDC186Q7Z3E2 898 aa18.8■□□□□ 0.6
MAP1LC3B-201ENST00000268607 FAM227BQ96M60 508 aa18.8■□□□□ 0.6
MAP1LC3B-201ENST00000268607 ATP6V1DQ9Y5K8 247 aa18.8■□□□□ 0.6
MAP1LC3B-201ENST00000268607 USP42Q9H9J4 1324 aaKnown RBP18.8■□□□□ 0.6
MAP1LC3B-201ENST00000268607 AMIGO3Q86WK7 504 aa18.79■□□□□ 0.6
MAP1LC3B-201ENST00000268607 DNAJC2Q99543 621 aaKnown RBP18.79■□□□□ 0.6
MAP1LC3B-201ENST00000268607 MORC2Q9Y6X9 1032 aaPredicted RBP18.79■□□□□ 0.6
MAP1LC3B-201ENST00000268607 LUZP1Q86V48 1076 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 189 ms