RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 VPS52Q8N1B4 723 aa13.7□□□□□ -0.22
SRRM4-201ENST00000267260 ARHGAP24Q8N264 748 aa13.7□□□□□ -0.22
SRRM4-201ENST00000267260 PLCD3Q8N3E9 789 aa13.7□□□□□ -0.22
SRRM4-201ENST00000267260 PRPF31Q8WWY3 499 aaKnown RBP13.7□□□□□ -0.22
SRRM4-201ENST00000267260 TNPO1Q92973 898 aaKnown RBP13.7□□□□□ -0.22
SRRM4-201ENST00000267260 SPAG5Q96R06 1193 aa13.7□□□□□ -0.22
SRRM4-201ENST00000267260 TRPC3Q13507 836 aa13.69□□□□□ -0.22
SRRM4-201ENST00000267260 WDR97A6NE52 1622 aa13.69□□□□□ -0.22
SRRM4-201ENST00000267260 GPR161Q8N6U8 529 aaKnown RBP13.69□□□□□ -0.22
SRRM4-201ENST00000267260 CADPSQ9ULU8 1353 aa13.69□□□□□ -0.22
SRRM4-201ENST00000267260 GJB2P29033 226 aa13.69□□□□□ -0.22
SRRM4-201ENST00000267260 BICDL1Q6ZP65 573 aa13.69□□□□□ -0.22
SRRM4-201ENST00000267260 CSRNP2Q9H175 543 aa13.69□□□□□ -0.22
SRRM4-201ENST00000267260 SPINK5Q9NQ38 1064 aaPredicted RBP13.69□□□□□ -0.22
SRRM4-201ENST00000267260 BICDL2A1A5D9 508 aa13.69□□□□□ -0.22
SRRM4-201ENST00000267260 ARHGAP25P42331 645 aa13.69□□□□□ -0.22
SRRM4-201ENST00000267260 TMEM57Q8N5G2 664 aa13.69□□□□□ -0.22
SRRM4-201ENST00000267260 CCDC38Q502W7 563 aa13.69□□□□□ -0.22
SRRM4-201ENST00000267260 TMEM67Q5HYA8 995 aa13.69□□□□□ -0.22
SRRM4-201ENST00000267260 IARSP41252 1262 aaKnown RBP13.69□□□□□ -0.22
SRRM4-201ENST00000267260 METAP2P50579 478 aaKnown RBP eCLIP13.69□□□□□ -0.22
SRRM4-201ENST00000267260 PRAM1Q96QH2 718 aa13.69□□□□□ -0.22
SRRM4-201ENST00000267260 ZNF354CQ86Y25 554 aa13.69□□□□□ -0.22
SRRM4-201ENST00000267260 DDX54Q8TDD1 881 aaKnown RBP13.69□□□□□ -0.22
SRRM4-201ENST00000267260 KAT14Q9H8E8 782 aa13.69□□□□□ -0.22
SRRM4-201ENST00000267260 IL1RAPL2Q9NP60 686 aa13.69□□□□□ -0.22
SRRM4-201ENST00000267260 DNAI1Q9UI46 699 aa13.69□□□□□ -0.22
SRRM4-201ENST00000267260 KIF14Q15058 1648 aa13.68□□□□□ -0.22
SRRM4-201ENST00000267260 RAB3IPQ96QF0 476 aaPredicted RBP13.68□□□□□ -0.22
SRRM4-201ENST00000267260 HDAC9Q9UKV0 1011 aa13.68□□□□□ -0.22
SRRM4-201ENST00000267260 SKILP12757 684 aa13.68□□□□□ -0.22
SRRM4-201ENST00000267260 NCBP1Q09161 790 aaKnown RBP13.68□□□□□ -0.22
SRRM4-201ENST00000267260 TMTC2Q8N394 836 aa13.68□□□□□ -0.22
SRRM4-201ENST00000267260 MAK16Q9BXY0 300 aaKnown RBP13.68□□□□□ -0.22
SRRM4-201ENST00000267260 NKIRAS1Q9NYS0 192 aa13.68□□□□□ -0.22
SRRM4-201ENST00000267260 KLHL40Q2TBA0 621 aa13.68□□□□□ -0.22
SRRM4-201ENST00000267260 MTUS1Q9ULD2 1270 aa13.68□□□□□ -0.22
SRRM4-201ENST00000267260 PSMA7O14818 248 aa13.68□□□□□ -0.22
SRRM4-201ENST00000267260 MIER3Q7Z3K6 550 aa13.68□□□□□ -0.22
SRRM4-201ENST00000267260 CCDC82Q8N4S0 544 aa13.68□□□□□ -0.22
SRRM4-201ENST00000267260 CCT6BQ92526 530 aa13.68□□□□□ -0.22
SRRM4-201ENST00000267260 MFSD6Q6ZSS7 791 aa13.68□□□□□ -0.22
SRRM4-201ENST00000267260 ZSCAN23Q3MJ62 389 aa13.67□□□□□ -0.22
SRRM4-201ENST00000267260 BOLA2Q9H3K6 86 aa13.67□□□□□ -0.22
SRRM4-201ENST00000267260 AFAP1L1Q8TED9 768 aa13.67□□□□□ -0.22
SRRM4-201ENST00000267260 VCX3AQ9NNX9 186 aa13.67□□□□□ -0.22
SRRM4-201ENST00000267260 KCNK9Q9NPC2 374 aa13.67□□□□□ -0.22
SRRM4-201ENST00000267260 TACC3Q9Y6A5 838 aa13.67□□□□□ -0.22
SRRM4-201ENST00000267260 C9orf84Q5VXU9 1444 aa13.67□□□□□ -0.22
SRRM4-201ENST00000267260 HLA-DOAP06340 250 aa13.67□□□□□ -0.22
SRRM4-201ENST00000267260 GKAP1Q5VSY0 366 aaPredicted RBP13.67□□□□□ -0.22
SRRM4-201ENST00000267260 INPP5BP32019 993 aa13.67□□□□□ -0.22
SRRM4-201ENST00000267260 GUCY1B3Q02153 619 aa13.67□□□□□ -0.22
SRRM4-201ENST00000267260 CCDC62Q6P9F0 684 aa13.67□□□□□ -0.22
SRRM4-201ENST00000267260 RNF216Q9NWF9 866 aaPredicted RBP13.67□□□□□ -0.22
SRRM4-201ENST00000267260 MRVI1Q9Y6F6 885 aa13.67□□□□□ -0.22
SRRM4-201ENST00000267260 PTPN23Q9H3S7 1636 aa13.67□□□□□ -0.22
SRRM4-201ENST00000267260 HAUS2Q9NVX0 235 aa13.67□□□□□ -0.22
SRRM4-201ENST00000267260 GIGYF1O75420 1035 aaPredicted RBP13.67□□□□□ -0.22
SRRM4-201ENST00000267260 CCDC26Q8TAB7 109 aa13.67□□□□□ -0.22
SRRM4-201ENST00000267260 PHACTR2O75167 634 aa13.66□□□□□ -0.22
SRRM4-201ENST00000267260 HS1BP3Q53T59 392 aa13.66□□□□□ -0.22
SRRM4-201ENST00000267260 NUTM1Q86Y26 1132 aa13.66□□□□□ -0.22
SRRM4-201ENST00000267260 TBC1D31Q96DN5 1066 aa13.66□□□□□ -0.22
SRRM4-201ENST00000267260 EXOC6BQ9Y2D4 811 aa13.66□□□□□ -0.22
SRRM4-201ENST00000267260 IDEP14735 1019 aa13.66□□□□□ -0.22
SRRM4-201ENST00000267260 KCNH5Q8NCM2 988 aa13.66□□□□□ -0.22
SRRM4-201ENST00000267260 MAP2K2P36507 400 aa13.66□□□□□ -0.22
SRRM4-201ENST00000267260 CHMP4BP1P59074 171 aa13.66□□□□□ -0.22
SRRM4-201ENST00000267260 TUBB2AQ13885 445 aa13.66□□□□□ -0.22
SRRM4-201ENST00000267260 LRCH2Q5VUJ6 765 aa13.66□□□□□ -0.22
SRRM4-201ENST00000267260 NCOA7Q8NI08 942 aa13.66□□□□□ -0.22
SRRM4-201ENST00000267260 ANKRD24Q8TF21 1146 aa13.66□□□□□ -0.22
SRRM4-201ENST00000267260 RPGRQ92834 1020 aaKnown RBP13.66□□□□□ -0.22
SRRM4-201ENST00000267260 TUBB2BQ9BVA1 445 aa13.66□□□□□ -0.22
SRRM4-201ENST00000267260 BIN1O00499 593 aa13.66□□□□□ -0.22
SRRM4-201ENST00000267260 TMEM132EQ6IEE7 984 aa13.66□□□□□ -0.22
SRRM4-201ENST00000267260 RNF10Q8N5U6 811 aaKnown RBP13.66□□□□□ -0.22
SRRM4-201ENST00000267260 TNNC1P63316 161 aa13.66□□□□□ -0.22
SRRM4-201ENST00000267260 AMOTQ4VCS5 1084 aa13.66□□□□□ -0.22
SRRM4-201ENST00000267260 MCUR1Q96AQ8 359 aa13.66□□□□□ -0.22
SRRM4-201ENST00000267260 CLUL1Q15846 466 aa13.65□□□□□ -0.22
SRRM4-201ENST00000267260 HVCN1Q96D96 273 aa13.65□□□□□ -0.22
SRRM4-201ENST00000267260 GBP5Q96PP8 586 aa13.65□□□□□ -0.22
SRRM4-201ENST00000267260 IRX4P78413 519 aa13.65□□□□□ -0.22
SRRM4-201ENST00000267260 PPP1R7Q15435 360 aa13.65□□□□□ -0.22
SRRM4-201ENST00000267260 KRT23Q9C075 422 aa13.65□□□□□ -0.22
SRRM4-201ENST00000267260 TMPOP42166 694 aaKnown RBP13.65□□□□□ -0.22
SRRM4-201ENST00000267260 GSTO1P78417 241 aa13.65□□□□□ -0.22
SRRM4-201ENST00000267260 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.65□□□□□ -0.22
SRRM4-201ENST00000267260 CRCPO75575 148 aa13.65□□□□□ -0.22
SRRM4-201ENST00000267260 CCT2P78371 535 aaKnown RBP13.65□□□□□ -0.22
SRRM4-201ENST00000267260 SDCCAG8Q86SQ7 713 aaPredicted RBP13.65□□□□□ -0.22
SRRM4-201ENST00000267260 CROCCP2Q86T23 111 aa13.65□□□□□ -0.22
SRRM4-201ENST00000267260 CNNM2Q9H8M5 875 aa13.65□□□□□ -0.22
SRRM4-201ENST00000267260 CAMSAP2Q08AD1 1489 aa13.65□□□□□ -0.22
SRRM4-201ENST00000267260 FAM169AQ9Y6X4 670 aa13.65□□□□□ -0.23
SRRM4-201ENST00000267260 NCAPGQ9BPX3 1015 aa13.64□□□□□ -0.23
SRRM4-201ENST00000267260 PFDN4Q9NQP4 134 aa13.64□□□□□ -0.23
SRRM4-201ENST00000267260 TIAM1Q13009 1591 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms