RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 CIAO1O76071 339 aa11.11□□□□□ -0.63
SSR3-201ENST00000265044 PDE8BO95263 885 aa11.11□□□□□ -0.63
SSR3-201ENST00000265044 TTF1Q15361 905 aaPredicted RBP11.11□□□□□ -0.63
SSR3-201ENST00000265044 CLEC4GQ6UXB4 293 aa11.11□□□□□ -0.63
SSR3-201ENST00000265044 ARHGEF1Q92888 912 aaKnown RBP11.11□□□□□ -0.63
SSR3-201ENST00000265044 SNX21Q969T3 373 aa11.11□□□□□ -0.63
SSR3-201ENST00000265044 PALD1Q9ULE6 856 aa11.11□□□□□ -0.63
SSR3-201ENST00000265044 ABCC6O95255 1503 aa11.11□□□□□ -0.63
SSR3-201ENST00000265044 CAMTA2O94983 1202 aa11.1□□□□□ -0.63
SSR3-201ENST00000265044 ANAPC15P60006 121 aa11.1□□□□□ -0.63
SSR3-201ENST00000265044 LPIN2Q92539 896 aa11.1□□□□□ -0.63
SSR3-201ENST00000265044 NOL10Q9BSC4 688 aaKnown RBP11.1□□□□□ -0.63
SSR3-201ENST00000265044 U3KPZ7 1027 aaPredicted RBP11.1□□□□□ -0.63
SSR3-201ENST00000265044 RFX5P48382 616 aaPredicted RBP11.1□□□□□ -0.63
SSR3-201ENST00000265044 KRT32Q14532 448 aa11.1□□□□□ -0.63
SSR3-201ENST00000265044 TBC1D9BQ66K14 1250 aa11.1□□□□□ -0.63
SSR3-201ENST00000265044 ZNF219Q9P2Y4 722 aaPredicted RBP11.1□□□□□ -0.63
SSR3-201ENST00000265044 CTNNA3Q9UI47 895 aa11.1□□□□□ -0.63
SSR3-201ENST00000265044 NSFL1CQ9UNZ2 370 aaKnown RBP11.1□□□□□ -0.63
SSR3-201ENST00000265044 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.1□□□□□ -0.63
SSR3-201ENST00000265044 C6orf229H3BNL8 230 aa11.1□□□□□ -0.63
SSR3-201ENST00000265044 RNF113AO15541 343 aaKnown RBP11.1□□□□□ -0.63
SSR3-201ENST00000265044 FOSBP53539 338 aa11.1□□□□□ -0.63
SSR3-201ENST00000265044 RBM6P78332 1123 aaKnown RBP11.1□□□□□ -0.63
SSR3-201ENST00000265044 PTH1RQ03431 593 aa11.1□□□□□ -0.63
SSR3-201ENST00000265044 PI16Q6UXB8 463 aa11.1□□□□□ -0.63
SSR3-201ENST00000265044 ZNF34Q8IZ26 560 aa11.1□□□□□ -0.63
SSR3-201ENST00000265044 PPP1R1BQ9UD71 204 aaPredicted RBP11.1□□□□□ -0.63
SSR3-201ENST00000265044 FBXO3Q9UK99 471 aa11.1□□□□□ -0.63
SSR3-201ENST00000265044 TDO2P48775 406 aa11.09□□□□□ -0.63
SSR3-201ENST00000265044 RPS8P62241 208 aaKnown RBP11.09□□□□□ -0.63
SSR3-201ENST00000265044 IMMTQ16891 758 aaKnown RBP11.09□□□□□ -0.63
SSR3-201ENST00000265044 ATG9AQ7Z3C6 839 aa11.09□□□□□ -0.63
SSR3-201ENST00000265044 TMX3Q96JJ7 454 aa11.09□□□□□ -0.63
SSR3-201ENST00000265044 HAUS7Q99871 368 aa11.09□□□□□ -0.63
SSR3-201ENST00000265044 NARFQ9UHQ1 456 aa11.09□□□□□ -0.63
SSR3-201ENST00000265044 JAG2Q9Y219 1238 aa11.09□□□□□ -0.63
SSR3-201ENST00000265044 GOLGA6L4A6NEF3 574 aa11.09□□□□□ -0.63
SSR3-201ENST00000265044 CREB3L3Q68CJ9 461 aa11.09□□□□□ -0.63
SSR3-201ENST00000265044 NFXL1Q6ZNB6 911 aa11.09□□□□□ -0.63
SSR3-201ENST00000265044 CCDC83Q8IWF9 413 aa11.09□□□□□ -0.63
SSR3-201ENST00000265044 ANTXR1Q9H6X2 564 aa11.09□□□□□ -0.63
SSR3-201ENST00000265044 MROH5Q6ZUA9 1318 aa11.09□□□□□ -0.63
SSR3-201ENST00000265044 RAD50Q92878 1312 aa11.09□□□□□ -0.63
SSR3-201ENST00000265044 DDX11L8A8MPP1 907 aa11.09□□□□□ -0.63
SSR3-201ENST00000265044 H3BQV1 296 aa11.09□□□□□ -0.63
SSR3-201ENST00000265044 CPLX1O14810 134 aa11.09□□□□□ -0.63
SSR3-201ENST00000265044 ZFYP08048 801 aaPredicted RBP11.09□□□□□ -0.63
SSR3-201ENST00000265044 IFFO2Q5TF58 517 aa11.09□□□□□ -0.63
SSR3-201ENST00000265044 MCTP1Q6DN14 999 aa11.09□□□□□ -0.63
SSR3-201ENST00000265044 NACAP1Q9BZK3 213 aa11.09□□□□□ -0.63
SSR3-201ENST00000265044 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.09□□□□□ -0.63
SSR3-201ENST00000265044 UBN2Q6ZU65 1347 aa11.09□□□□□ -0.63
SSR3-201ENST00000265044 USP54Q70EL1 1684 aa11.09□□□□□ -0.63
SSR3-201ENST00000265044 XIRP1Q702N8 1843 aaKnown RBP11.09□□□□□ -0.63
SSR3-201ENST00000265044 COL14A1Q05707 1796 aaKnown RBP11.08□□□□□ -0.64
SSR3-201ENST00000265044 CDHR2Q9BYE9 1310 aa11.08□□□□□ -0.64
SSR3-201ENST00000265044 CASP7P55210 303 aa11.08□□□□□ -0.64
SSR3-201ENST00000265044 CCDC102BQ68D86 513 aa11.08□□□□□ -0.64
SSR3-201ENST00000265044 LRRC2Q9BYS8 371 aa11.08□□□□□ -0.64
SSR3-201ENST00000265044 CWC22Q9HCG8 908 aaKnown RBP11.08□□□□□ -0.64
SSR3-201ENST00000265044 GPR108Q9NPR9 543 aa11.08□□□□□ -0.64
SSR3-201ENST00000265044 DDX49Q9Y6V7 483 aaKnown RBP11.08□□□□□ -0.64
SSR3-201ENST00000265044 DEKP35659 375 aaKnown RBP11.08□□□□□ -0.64
SSR3-201ENST00000265044 PHKA1P46020 1223 aa11.08□□□□□ -0.64
SSR3-201ENST00000265044 CHRNDQ07001 517 aa11.08□□□□□ -0.64
SSR3-201ENST00000265044 ZNF622Q969S3 477 aaKnown RBP eCLIP11.08□□□□□ -0.64
SSR3-201ENST00000265044 LIMCH1Q9UPQ0 1083 aa11.08□□□□□ -0.64
SSR3-201ENST00000265044 ZNF213O14771 459 aa11.08□□□□□ -0.64
SSR3-201ENST00000265044 CD2BP2O95400 341 aaKnown RBP11.08□□□□□ -0.64
SSR3-201ENST00000265044 BCAMP50895 628 aa11.08□□□□□ -0.64
SSR3-201ENST00000265044 ANKRD1Q15327 319 aa11.08□□□□□ -0.64
SSR3-201ENST00000265044 NAPBQ9H115 298 aa11.08□□□□□ -0.64
SSR3-201ENST00000265044 SNX14Q9Y5W7 946 aa11.08□□□□□ -0.64
SSR3-201ENST00000265044 HSPA4P34932 840 aa11.07□□□□□ -0.64
SSR3-201ENST00000265044 GNL2Q13823 731 aaKnown RBP11.07□□□□□ -0.64
SSR3-201ENST00000265044 NEK1Q96PY6 1258 aa11.07□□□□□ -0.64
SSR3-201ENST00000265044 LTBP4Q8N2S1 1624 aa11.07□□□□□ -0.64
SSR3-201ENST00000265044 SLFNL1Q499Z3 407 aa11.07□□□□□ -0.64
SSR3-201ENST00000265044 ANP32BQ92688 251 aaKnown RBP11.07□□□□□ -0.64
SSR3-201ENST00000265044 PARP4Q9UKK3 1724 aaKnown RBP11.07□□□□□ -0.64
SSR3-201ENST00000265044 FAM208AQ9UK61 1670 aaKnown RBP11.07□□□□□ -0.64
SSR3-201ENST00000265044 MINDY4BA8MYZ0 360 aa11.07□□□□□ -0.64
SSR3-201ENST00000265044 MSL1Q68DK7 614 aa11.07□□□□□ -0.64
SSR3-201ENST00000265044 SYNE3Q6ZMZ3 975 aa11.07□□□□□ -0.64
SSR3-201ENST00000265044 MAGEB6Q8N7X4 407 aa11.07□□□□□ -0.64
SSR3-201ENST00000265044 ISY1Q9ULR0 285 aaKnown RBP11.07□□□□□ -0.64
SSR3-201ENST00000265044 COL18A1P39060 1754 aa11.06□□□□□ -0.64
SSR3-201ENST00000265044 KDM4AO75164 1064 aa11.06□□□□□ -0.64
SSR3-201ENST00000265044 CSF1RP07333 972 aa11.06□□□□□ -0.64
SSR3-201ENST00000265044 GYG1P46976 350 aa11.06□□□□□ -0.64
SSR3-201ENST00000265044 ZGPATQ8N5A5 531 aaKnown RBP11.06□□□□□ -0.64
SSR3-201ENST00000265044 MIGA1Q8NAN2 632 aa11.06□□□□□ -0.64
SSR3-201ENST00000265044 HMG20BQ9P0W2 317 aa11.06□□□□□ -0.64
SSR3-201ENST00000265044 CIZ1Q9ULV3 898 aaPredicted RBP11.06□□□□□ -0.64
SSR3-201ENST00000265044 KIF3AQ9Y496 699 aa11.06□□□□□ -0.64
SSR3-201ENST00000265044 AHDC1Q5TGY3 1603 aaPredicted RBP11.06□□□□□ -0.64
SSR3-201ENST00000265044 CYP7A1P22680 504 aa11.06□□□□□ -0.64
SSR3-201ENST00000265044 AK2P54819 239 aa11.06□□□□□ -0.64
SSR3-201ENST00000265044 TXNRD1Q16881 649 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms