RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 HDAC5Q9UQL6 1122 aa22.9■■□□□ 1.26
SDF4-201ENST00000263741 SOGA3Q5TF21 947 aa22.89■■□□□ 1.26
SDF4-201ENST00000263741 TAOK3Q9H2K8 898 aa22.89■■□□□ 1.26
SDF4-201ENST00000263741 GPR101Q96P66 508 aaPredicted RBP22.89■■□□□ 1.25
SDF4-201ENST00000263741 SIL1Q9H173 461 aa22.89■■□□□ 1.25
SDF4-201ENST00000263741 BSDC1Q9NW68 430 aaPredicted RBP22.89■■□□□ 1.25
SDF4-201ENST00000263741 NSFL1CQ9UNZ2 370 aaKnown RBP22.89■■□□□ 1.25
SDF4-201ENST00000263741 WTIPA6NIX2 430 aaPredicted RBP22.88■■□□□ 1.25
SDF4-201ENST00000263741 LDHAL6AQ6ZMR3 332 aa22.88■■□□□ 1.25
SDF4-201ENST00000263741 TMC4Q7Z404 712 aa22.88■■□□□ 1.25
SDF4-201ENST00000263741 TMX4Q9H1E5 349 aaPredicted RBP22.88■■□□□ 1.25
SDF4-201ENST00000263741 ZNF277Q9NRM2 450 aaPredicted RBP22.88■■□□□ 1.25
SDF4-201ENST00000263741 MINPP1Q9UNW1 487 aa22.88■■□□□ 1.25
SDF4-201ENST00000263741 COL4A5P29400 1685 aa22.88■■□□□ 1.25
SDF4-201ENST00000263741 LRRC24Q50LG9 513 aa22.88■■□□□ 1.25
SDF4-201ENST00000263741 DPP8Q6V1X1 898 aaPredicted RBP22.88■■□□□ 1.25
SDF4-201ENST00000263741 HELBQ8NG08 1087 aaPredicted RBP22.88■■□□□ 1.25
SDF4-201ENST00000263741 CNNM1Q9NRU3 951 aa22.88■■□□□ 1.25
SDF4-201ENST00000263741 PTPN12Q05209 780 aaKnown RBP22.87■■□□□ 1.25
SDF4-201ENST00000263741 MTX1Q13505 466 aa22.87■■□□□ 1.25
SDF4-201ENST00000263741 CEP85Q6P2H3 762 aa22.87■■□□□ 1.25
SDF4-201ENST00000263741 RTKN2Q8IZC4 609 aa22.87■■□□□ 1.25
SDF4-201ENST00000263741 MPNDQ8N594 471 aa22.87■■□□□ 1.25
SDF4-201ENST00000263741 FKBP4Q02790 459 aaKnown RBP eCLIP22.86■■□□□ 1.258e-7■■■■□ 22.5
SDF4-201ENST00000263741 ANKIB1Q9P2G1 1089 aa22.86■■□□□ 1.25
SDF4-201ENST00000263741 CHRNDQ07001 517 aa22.86■■□□□ 1.25
SDF4-201ENST00000263741 CC2D2BQ6DHV5 1058 aa22.86■■□□□ 1.25
SDF4-201ENST00000263741 SNAP23O00161 211 aa22.85■■□□□ 1.25
SDF4-201ENST00000263741 TAF5LO75529 589 aa22.85■■□□□ 1.25
SDF4-201ENST00000263741 POLLQ9UGP5 575 aa22.84■■□□□ 1.25
SDF4-201ENST00000263741 UFL1O94874 794 aa22.83■■□□□ 1.25
SDF4-201ENST00000263741 EXOC6Q8TAG9 804 aa22.83■■□□□ 1.25
SDF4-201ENST00000263741 RNF181Q9P0P0 153 aa22.83■■□□□ 1.25
SDF4-201ENST00000263741 XDHP47989 1333 aa22.83■■□□□ 1.25
SDF4-201ENST00000263741 LTBP3Q9NS15 1303 aa22.83■■□□□ 1.25
SDF4-201ENST00000263741 C6orf229H3BNL8 230 aa22.83■■□□□ 1.24
SDF4-201ENST00000263741 ATP8B2P98198 1209 aa22.83■■□□□ 1.24
SDF4-201ENST00000263741 PSMD1Q99460 953 aa22.83■■□□□ 1.24
SDF4-201ENST00000263741 C9orf131Q5VYM1 1079 aa22.82■■□□□ 1.24
SDF4-201ENST00000263741 SIRT2Q8IXJ6 389 aa22.82■■□□□ 1.24
SDF4-201ENST00000263741 TBC1D16Q8TBP0 767 aa22.82■■□□□ 1.24
SDF4-201ENST00000263741 RIPOR2Q9Y4F9 1068 aa22.82■■□□□ 1.24
SDF4-201ENST00000263741 AOC3Q16853 763 aa22.81■■□□□ 1.24
SDF4-201ENST00000263741 EYA2O00167 538 aa22.81■■□□□ 1.24
SDF4-201ENST00000263741 LMNB1P20700 586 aa22.81■■□□□ 1.24
SDF4-201ENST00000263741 POLA2Q14181 598 aa22.81■■□□□ 1.24
SDF4-201ENST00000263741 SSH3Q8TE77 659 aa22.81■■□□□ 1.24
SDF4-201ENST00000263741 CHMP4BQ9H444 224 aaKnown RBP22.81■■□□□ 1.24
SDF4-201ENST00000263741 GGA1Q9UJY5 639 aa22.81■■□□□ 1.24
SDF4-201ENST00000263741 RIMBP2O15034 1052 aa22.8■■□□□ 1.24
SDF4-201ENST00000263741 KLRK1P26718 216 aa22.8■■□□□ 1.24
SDF4-201ENST00000263741 IARSP41252 1262 aaKnown RBP22.8■■□□□ 1.24
SDF4-201ENST00000263741 ATG9AQ7Z3C6 839 aa22.8■■□□□ 1.24
SDF4-201ENST00000263741 RTFDC1Q9BY42 306 aaPredicted RBP22.8■■□□□ 1.24
SDF4-201ENST00000263741 COPRSQ9NQ92 184 aa22.8■■□□□ 1.24
SDF4-201ENST00000263741 PODXL2Q9NZ53 605 aa22.8■■□□□ 1.24
SDF4-201ENST00000263741 PPIP5K2O43314 1243 aa22.8■■□□□ 1.24
SDF4-201ENST00000263741 METTL24Q5JXM2 366 aa22.8■■□□□ 1.24
SDF4-201ENST00000263741 SCN9AQ15858 1988 aa22.79■■□□□ 1.24
SDF4-201ENST00000263741 GRIPAP1Q4V328 841 aa22.78■■□□□ 1.24
SDF4-201ENST00000263741 ANKRD2Q9GZV1 360 aa22.78■■□□□ 1.24
SDF4-201ENST00000263741 PCDHB15Q9Y5E8 787 aa22.78■■□□□ 1.24
SDF4-201ENST00000263741 KCNJ4P48050 445 aa22.77■■□□□ 1.24
SDF4-201ENST00000263741 LARGE2Q8N3Y3 721 aa22.77■■□□□ 1.24
SDF4-201ENST00000263741 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.77■■□□□ 1.24
SDF4-201ENST00000263741 ZNF804BA4D1E1 1349 aa22.77■■□□□ 1.24
SDF4-201ENST00000263741 MROH5Q6ZUA9 1318 aa22.77■■□□□ 1.24
SDF4-201ENST00000263741 ARAP2Q8WZ64 1704 aa22.77■■□□□ 1.24
SDF4-201ENST00000263741 TXNRD3Q86VQ6 643 aa22.77■■□□□ 1.23
SDF4-201ENST00000263741 VGLL2Q8N8G2 317 aa22.77■■□□□ 1.23
SDF4-201ENST00000263741 ATP2B4P23634 1241 aa22.76■■□□□ 1.23
SDF4-201ENST00000263741 WASHC4Q2M389 1173 aa22.76■■□□□ 1.23
SDF4-201ENST00000263741 SUPT20HQ8NEM7 779 aa22.76■■□□□ 1.23
SDF4-201ENST00000263741 EXOC6BQ9Y2D4 811 aa22.76■■□□□ 1.23
SDF4-201ENST00000263741 SURF6O75683 361 aaKnown RBP22.75■■□□□ 1.23
SDF4-201ENST00000263741 CIAO1O76071 339 aa22.75■■□□□ 1.23
SDF4-201ENST00000263741 RPAP2Q8IXW5 612 aaPredicted RBP22.75■■□□□ 1.23
SDF4-201ENST00000263741 MYH13Q9UKX3 1938 aa22.75■■□□□ 1.23
SDF4-201ENST00000263741 KIAA2012Q0VF49 1180 aa22.75■■□□□ 1.23
SDF4-201ENST00000263741 DBNDD1Q9H9R9 158 aa22.75■■□□□ 1.23
SDF4-201ENST00000263741 DOK7Q18PE1 504 aa22.74■■□□□ 1.23
SDF4-201ENST00000263741 IL15P40933 162 aaPredicted RBP22.73■■□□□ 1.23
SDF4-201ENST00000263741 OS9Q13438 667 aaPredicted RBP22.73■■□□□ 1.23
SDF4-201ENST00000263741 TSHZ2Q9NRE2 1034 aa22.73■■□□□ 1.23
SDF4-201ENST00000263741 LEMD3Q9Y2U8 911 aa22.73■■□□□ 1.23
SDF4-201ENST00000263741 PSME4Q14997 1843 aa22.73■■□□□ 1.23
SDF4-201ENST00000263741 ZNF646O15015 1829 aaPredicted RBP22.73■■□□□ 1.23
SDF4-201ENST00000263741 PDE8BO95263 885 aa22.73■■□□□ 1.23
SDF4-201ENST00000263741 TFCP2Q12800 502 aa22.73■■□□□ 1.23
SDF4-201ENST00000263741 MED23Q9ULK4 1368 aa22.73■■□□□ 1.23
SDF4-201ENST00000263741 APBB1O00213 710 aa22.72■■□□□ 1.23
SDF4-201ENST00000263741 EYA3Q99504 573 aa22.72■■□□□ 1.23
SDF4-201ENST00000263741 ZC3H12CQ9C0D7 883 aaKnown RBP22.72■■□□□ 1.23
SDF4-201ENST00000263741 IRS2Q9Y4H2 1338 aa22.72■■□□□ 1.23
SDF4-201ENST00000263741 G3BP1Q13283 466 aaKnown RBP eCLIP22.72■■□□□ 1.23
SDF4-201ENST00000263741 FBXO3Q9UK99 471 aa22.72■■□□□ 1.23
SDF4-201ENST00000263741 ZNF541Q9H0D2 1346 aa22.71■■□□□ 1.23
SDF4-201ENST00000263741 HMMRO75330 724 aa22.71■■□□□ 1.23
SDF4-201ENST00000263741 SASH1O94885 1247 aa22.71■■□□□ 1.23
SDF4-201ENST00000263741 NIM1KQ8IY84 436 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms